RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 DEF6Q9H4E7 631 aa6.81□□□□□ -1.32
VPS50-206ENST00000443443 INCENPQ9NQS7 918 aa6.81□□□□□ -1.32
VPS50-206ENST00000443443 UCKL1Q9NWZ5 548 aa6.81□□□□□ -1.32
VPS50-206ENST00000443443 GALNT8Q9NY28 637 aa6.81□□□□□ -1.32
VPS50-206ENST00000443443 POLD1P28340 1107 aa6.8□□□□□ -1.32
VPS50-206ENST00000443443 CSF2RBP32927 897 aa6.8□□□□□ -1.32
VPS50-206ENST00000443443 USP10Q14694 798 aaKnown RBP6.8□□□□□ -1.32
VPS50-206ENST00000443443 SEC23AQ15436 765 aa6.8□□□□□ -1.32
VPS50-206ENST00000443443 FGD2Q7Z6J4 655 aa6.8□□□□□ -1.32
VPS50-206ENST00000443443 TTC9BQ8N6N2 239 aa6.8□□□□□ -1.32
VPS50-206ENST00000443443 C2orf69Q8N8R5 385 aa6.8□□□□□ -1.32
VPS50-206ENST00000443443 IGSF22Q8N9C0 903 aa6.8□□□□□ -1.32
VPS50-206ENST00000443443 MRFAP1L1Q96HT8 127 aa6.8□□□□□ -1.32
VPS50-206ENST00000443443 LRRC37BQ96QE4 947 aa6.8□□□□□ -1.32
VPS50-206ENST00000443443 MRPL4Q9BYD3 311 aaKnown RBP6.8□□□□□ -1.32
VPS50-206ENST00000443443 ZSWIM4Q9H7M6 989 aa6.8□□□□□ -1.32
VPS50-206ENST00000443443 PTPN22Q9Y2R2 807 aa6.8□□□□□ -1.32
VPS50-206ENST00000443443 TCRBV16S1A1N1A0A5B0 115 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 SLC12A8A0AV02 714 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 GPR42O15529 346 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 RAPGEF3O95398 923 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 MMEP08473 750 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 ZNF888P0CJ79 500 aaPredicted RBP6.79□□□□□ -1.32
VPS50-206ENST00000443443 MC4RP32245 332 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 ADCY8P40145 1251 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 RRADP55042 308 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 HERVK_113P62684 666 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 ICAM4Q14773 271 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 TMEM132BQ14DG7 1078 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 TRIM61Q5EBN2 209 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 REXO1L1PQ8IX06 675 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 JMYQ8N9B5 988 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 HIPK4Q8NE63 616 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 LMF1Q96S06 567 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 CELF4Q9BZC1 486 aaKnown RBP6.79□□□□□ -1.32
VPS50-206ENST00000443443 KATNBL1Q9H079 304 aa6.79□□□□□ -1.32
VPS50-206ENST00000443443 HIP1RO75146 1068 aa6.78□□□□□ -1.32
VPS50-206ENST00000443443 ZNF20P17024 532 aa6.78□□□□□ -1.32
VPS50-206ENST00000443443 AOAHP28039 575 aa6.78□□□□□ -1.32
VPS50-206ENST00000443443 KCNQ1P51787 676 aa6.78□□□□□ -1.32
VPS50-206ENST00000443443 OVCH1Q7RTY7 1134 aa6.78□□□□□ -1.32
VPS50-206ENST00000443443 GIMAP8Q8ND71 665 aaPredicted RBP6.78□□□□□ -1.32
VPS50-206ENST00000443443 ERCC4Q92889 916 aaPredicted RBP6.78□□□□□ -1.32
VPS50-206ENST00000443443 DVL3Q92997 716 aaPredicted RBP6.78□□□□□ -1.32
VPS50-206ENST00000443443 GNRHR2Q96P88 292 aa6.78□□□□□ -1.32
VPS50-206ENST00000443443 GBP4Q96PP9 640 aa6.78□□□□□ -1.32
VPS50-206ENST00000443443 NCOA5Q9HCD5 579 aaKnown RBP6.78□□□□□ -1.32
VPS50-206ENST00000443443 KCNH7Q9NS40 1196 aa6.78□□□□□ -1.32
VPS50-206ENST00000443443 CDC42EP3Q9UKI2 254 aa6.78□□□□□ -1.32
VPS50-206ENST00000443443 MYRFQ9Y2G1 1151 aa6.78□□□□□ -1.32
VPS50-206ENST00000443443 PRAMEF22A3QJZ6 481 aa6.77□□□□□ -1.33
VPS50-206ENST00000443443 CUTAO60888 179 aa6.77□□□□□ -1.33
VPS50-206ENST00000443443 KRT37O76014 449 aa6.77□□□□□ -1.33
VPS50-206ENST00000443443 CNOT4O95628 575 aaKnown RBP6.77□□□□□ -1.33
VPS50-206ENST00000443443 NOLC1Q14978 699 aaKnown RBP eCLIP6.77□□□□□ -1.33
VPS50-206ENST00000443443 TMEM177Q53S58 311 aa6.77□□□□□ -1.33
VPS50-206ENST00000443443 ZNF585AQ6P3V2 769 aa6.77□□□□□ -1.33
VPS50-206ENST00000443443 OTOP2Q7RTS6 562 aa6.77□□□□□ -1.33
VPS50-206ENST00000443443 BTBD2Q9BX70 525 aa6.77□□□□□ -1.33
VPS50-206ENST00000443443 BTBD7Q9P203 1132 aa6.77□□□□□ -1.33
VPS50-206ENST00000443443 SLC4A7Q9Y6M7 1214 aa6.77□□□□□ -1.33
VPS50-206ENST00000443443 PLD2O14939 933 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 FOXP2O15409 715 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 NPTXRO95502 500 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 KCNA6P17658 529 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 ECE1P42892 770 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 IL13RA1P78552 427 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 TOP3AQ13472 1001 aaPredicted RBP6.76□□□□□ -1.33
VPS50-206ENST00000443443 ABHD17CQ6PCB6 329 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 LRSAM1Q6UWE0 723 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 CXXC5Q7LFL8 322 aaKnown RBP6.76□□□□□ -1.33
VPS50-206ENST00000443443 DDX53Q86TM3 631 aaKnown RBP6.76□□□□□ -1.33
VPS50-206ENST00000443443 TAX1BP1Q86VP1 789 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 NOSTRINQ8IVI9 506 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 ASB15Q8WXK1 588 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 WNK4Q96J92 1243 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 DRC1Q96MC2 740 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 KLC2Q9H0B6 622 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 SEC61A2Q9H9S3 476 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 TRIM39Q9HCM9 518 aa6.76□□□□□ -1.33
VPS50-206ENST00000443443 KCNQ2O43526 872 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 ZNF623O75123 536 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 HMGCRP04035 888 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 RAC3P60763 192 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 IRF9Q00978 393 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 CD83Q01151 205 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 TM4SF20Q53R12 229 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 ZMAT1Q5H9K5 638 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 FSTL4Q6MZW2 842 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 PALM2Q8IXS6 379 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 C1QTNF3Q9BXJ4 246 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 AMNQ9BXJ7 453 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 ZDHHC5Q9C0B5 715 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 MEGF9Q9H1U4 602 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 C12orf65Q9H3J6 166 aaKnown RBP6.75□□□□□ -1.33
VPS50-206ENST00000443443 FBXO10Q9UK96 956 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 TCAF1Q9Y4C2 921 aa6.75□□□□□ -1.33
VPS50-206ENST00000443443 B4E1Z4 1266 aa6.74□□□□□ -1.33
VPS50-206ENST00000443443 M0R2C6 588 aa6.74□□□□□ -1.33
VPS50-206ENST00000443443 OPA1O60313 960 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms