RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 UBIAD1Q9Y5Z9 338 aa16.56■□□□□ 0.24
HMGN1-208ENST00000443046 PLXNA3P51805 1871 aa16.56■□□□□ 0.24
HMGN1-208ENST00000443046 GFRA3O60609 400 aa16.55■□□□□ 0.24
HMGN1-208ENST00000443046 CYP21A2P08686 494 aa16.55■□□□□ 0.24
HMGN1-208ENST00000443046 SMARCA1P28370 1054 aa16.55■□□□□ 0.24
HMGN1-208ENST00000443046 AVPR2P30518 371 aa16.55■□□□□ 0.24
HMGN1-208ENST00000443046 GATMP50440 423 aa16.55■□□□□ 0.24
HMGN1-208ENST00000443046 RBM10P98175 930 aaKnown RBP16.55■□□□□ 0.24
HMGN1-208ENST00000443046 TMEM184AQ6ZMB5 413 aa16.55■□□□□ 0.24
HMGN1-208ENST00000443046 CUL5Q93034 780 aa16.55■□□□□ 0.24
HMGN1-208ENST00000443046 RPGRIP1Q96KN7 1286 aa16.55■□□□□ 0.24
HMGN1-208ENST00000443046 MAP3K14Q99558 947 aa16.55■□□□□ 0.24
HMGN1-208ENST00000443046 FAM49AQ9H0Q0 323 aaPredicted RBP16.55■□□□□ 0.24
HMGN1-208ENST00000443046 S1PR5Q9H228 398 aa16.55■□□□□ 0.24
HMGN1-208ENST00000443046 FRYLO94915 3013 aa16.55■□□□□ 0.24
HMGN1-208ENST00000443046 FSCN2O14926 492 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 PER2O15055 1255 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 MAFGO15525 162 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 NUBP1P53384 320 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 IGBP1P78318 339 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 TRDNQ13061 729 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 WTAPQ15007 396 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 PTPN21Q16825 1174 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 DUSP6Q16828 381 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 B4GALNT3Q6L9W6 998 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 IGDCC4Q8TDY8 1250 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 PIBF1Q8WXW3 757 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 CDCA3Q99618 268 aaPredicted RBP16.54■□□□□ 0.24
HMGN1-208ENST00000443046 CELF4Q9BZC1 486 aaKnown RBP16.54■□□□□ 0.24
HMGN1-208ENST00000443046 IRF2BPLQ9H1B7 796 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 TAF6LQ9Y6J9 622 aa16.54■□□□□ 0.24
HMGN1-208ENST00000443046 DMXL1Q9Y485 3027 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 ERICH2A1L162 156 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 FSD2A1L4K1 749 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 PROB1E7EW31 1015 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 SARSP49591 514 aaKnown RBP16.53■□□□□ 0.24
HMGN1-208ENST00000443046 ERVFC1P60507 584 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 TMEM62Q0P6H9 643 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 PAK2Q13177 524 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 MTMR1Q13613 665 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 NME8Q8N427 588 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 RASGRP4Q8TDF6 673 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 RRP36Q96EU6 259 aaKnown RBP16.53■□□□□ 0.24
HMGN1-208ENST00000443046 JADE2Q9NQC1 790 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 TLR9Q9NR96 1032 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 FAM86C1Q9NVL1 165 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 PCDHB12Q9Y5F1 795 aa16.53■□□□□ 0.24
HMGN1-208ENST00000443046 FAM186AA6NE01 2351 aa16.52■□□□□ 0.24
HMGN1-208ENST00000443046 SMIM35A0A1B0GVV1 85 aa16.52■□□□□ 0.24
HMGN1-208ENST00000443046 MGEA5O60502 916 aa16.52■□□□□ 0.24
HMGN1-208ENST00000443046 PPFIA3O75145 1194 aa16.52■□□□□ 0.24
HMGN1-208ENST00000443046 ANTXR2P58335 489 aa16.52■□□□□ 0.24
HMGN1-208ENST00000443046 AAMPQ13685 434 aa16.52■□□□□ 0.24
HMGN1-208ENST00000443046 PLCB4Q15147 1175 aa16.52■□□□□ 0.24
HMGN1-208ENST00000443046 PDE12Q6L8Q7 609 aaKnown RBP16.52■□□□□ 0.24
HMGN1-208ENST00000443046 PLPPR4Q7Z2D5 763 aa16.52■□□□□ 0.24
HMGN1-208ENST00000443046 CATIPQ7Z7H3 387 aa16.52■□□□□ 0.24
HMGN1-208ENST00000443046 NEK1Q96PY6 1258 aa16.52■□□□□ 0.24
HMGN1-208ENST00000443046 RWDD1Q9H446 243 aaPredicted RBP16.52■□□□□ 0.24
HMGN1-208ENST00000443046 PSTPIP2Q9H939 334 aa16.52■□□□□ 0.24
HMGN1-208ENST00000443046 U3KPZ7 1027 aaPredicted RBP16.52■□□□□ 0.24
HMGN1-208ENST00000443046 MYO10Q9HD67 2058 aa16.52■□□□□ 0.23
HMGN1-208ENST00000443046 ZNF292O60281 2723 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 E7EWF7 191 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 M0QZ92 97 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 FGF18O76093 207 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 IGHDP01880 384 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 PTH1RQ03431 593 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 SART3Q15020 963 aaKnown RBP16.51■□□□□ 0.23
HMGN1-208ENST00000443046 SYCE2Q6PIF2 218 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 NCOA7Q8NI08 942 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 MICAL1Q8TDZ2 1067 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 TRAPPC12Q8WVT3 735 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 TNPO1Q92973 898 aaKnown RBP16.51■□□□□ 0.23
HMGN1-208ENST00000443046 RIPOR3Q96MK2 946 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 CWH43Q9H720 699 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 ERVK-5Q9HDB9 667 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 JPH1Q9HDC5 661 aaPredicted RBP16.51■□□□□ 0.23
HMGN1-208ENST00000443046 RGS18Q9NS28 235 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 LRFN2Q9ULH4 789 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 PCDHB7Q9Y5E2 793 aa16.51■□□□□ 0.23
HMGN1-208ENST00000443046 C9IYK1 514 aa16.5■□□□□ 0.23
HMGN1-208ENST00000443046 PDGFBP01127 241 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-208ENST00000443046 FAM189BP81408 668 aa16.5■□□□□ 0.23
HMGN1-208ENST00000443046 FOXK2Q01167 660 aa16.5■□□□□ 0.23
HMGN1-208ENST00000443046 KRT76Q01546 638 aa16.5■□□□□ 0.23
HMGN1-208ENST00000443046 TMEM266Q2M3C6 531 aa16.5■□□□□ 0.23
HMGN1-208ENST00000443046 FAM102BQ5T8I3 360 aa16.5■□□□□ 0.23
HMGN1-208ENST00000443046 ANKRD54Q6NXT1 300 aa16.5■□□□□ 0.23
HMGN1-208ENST00000443046 MTHFD1LQ6UB35 978 aa16.5■□□□□ 0.23
HMGN1-208ENST00000443046 MB21D2Q8IYB1 491 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-208ENST00000443046 SRBD1Q8N5C6 995 aaKnown RBP16.5■□□□□ 0.23
HMGN1-208ENST00000443046 ATOH1Q92858 354 aaPredicted RBP16.5■□□□□ 0.23
HMGN1-208ENST00000443046 LZTS2Q9BRK4 669 aa16.5■□□□□ 0.23
HMGN1-208ENST00000443046 LY9Q9HBG7 655 aa16.5■□□□□ 0.23
HMGN1-208ENST00000443046 AAASQ9NRG9 546 aa16.5■□□□□ 0.23
HMGN1-208ENST00000443046 TYW1Q9NV66 732 aaKnown RBP16.5■□□□□ 0.23
HMGN1-208ENST00000443046 PKD2L1Q9P0L9 805 aa16.5■□□□□ 0.23
HMGN1-208ENST00000443046 SLC9A2Q9UBY0 812 aa16.5■□□□□ 0.23
HMGN1-208ENST00000443046 LZTS1Q9Y250 596 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms