RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 MARCH8Q5T0T0 291 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 SERINC5Q86VE9 423 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 CCDC155Q8N6L0 562 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 RETREG2Q8NC44 543 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 TRAPPC12Q8WVT3 735 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 BBXQ8WY36 941 aaPredicted RBP13.85□□□□□ -0.19
USP1-203ENST00000442679 DHX38Q92620 1227 aaKnown RBP13.85□□□□□ -0.19
USP1-203ENST00000442679 DYDC2Q96IM9 177 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 FAM167AQ96KS9 214 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 RGL1Q9NZL6 768 aa13.85□□□□□ -0.19
USP1-203ENST00000442679 DDX11L8A8MPP1 907 aa13.84□□□□□ -0.19
USP1-203ENST00000442679 DKC1O60832 514 aaKnown RBP eCLIP13.84□□□□□ -0.19
USP1-203ENST00000442679 SLITRK3O94933 977 aa13.84□□□□□ -0.19
USP1-203ENST00000442679 OATP04181 439 aa13.84□□□□□ -0.19
USP1-203ENST00000442679 ZSCAN22P10073 491 aaPredicted RBP13.84□□□□□ -0.19
USP1-203ENST00000442679 CCL23P55773 120 aa13.84□□□□□ -0.19
USP1-203ENST00000442679 XKR3Q5GH77 459 aa13.84□□□□□ -0.19
USP1-203ENST00000442679 FOXD4L5Q5VV16 416 aaPredicted RBP13.84□□□□□ -0.19
USP1-203ENST00000442679 MFSD5Q6N075 450 aa13.84□□□□□ -0.19
USP1-203ENST00000442679 FAM173BQ6P4H8 233 aa13.84□□□□□ -0.19
USP1-203ENST00000442679 CAGE1Q8TC20 777 aa13.84□□□□□ -0.19
USP1-203ENST00000442679 FOXD4L4Q8WXT5 416 aaPredicted RBP13.84□□□□□ -0.19
USP1-203ENST00000442679 EIF2AK1Q9BQI3 630 aaKnown RBP13.84□□□□□ -0.19
USP1-203ENST00000442679 TUBE1Q9UJT0 475 aa13.84□□□□□ -0.19
USP1-203ENST00000442679 UMODL1Q5DID0 1318 aa13.84□□□□□ -0.19
USP1-203ENST00000442679 MBLAC1A4D2B0 266 aaPredicted RBP13.83□□□□□ -0.2
USP1-203ENST00000442679 POTEMA6NI47 508 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 ZBTB42B2RXF5 422 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 STBD1O95210 358 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 KLRC1P26715 233 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 PRPHP41219 470 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.23e-7■■□□□ 12.2
USP1-203ENST00000442679 ATP2C1P98194 919 aaPredicted RBP13.83□□□□□ -0.2
USP1-203ENST00000442679 CYP4A11Q02928 519 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 CTTNQ14247 550 aaKnown RBP13.83□□□□□ -0.2
USP1-203ENST00000442679 PDIA5Q14554 519 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 TRIM71Q2Q1W2 868 aaKnown RBP13.83□□□□□ -0.2
USP1-203ENST00000442679 DTHD1Q6ZMT9 781 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 RUFY4Q6ZNE9 571 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 TPH2Q8IWU9 490 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 TMEM199Q8N511 208 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 ERMNQ8TAM6 284 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 WNT8BQ93098 351 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 ZBTB10Q96DT7 871 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 GDF15Q99988 308 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 HSD17B14Q9BPX1 270 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 LXNQ9BS40 222 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 ZSWIM4Q9H7M6 989 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 LRWD1Q9UFC0 647 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 CEP131Q9UPN4 1083 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 COL1A2P08123 1366 aa13.83□□□□□ -0.2
USP1-203ENST00000442679 BMP15O95972 392 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 CKBP12277 381 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 SELPP16109 830 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 THPOP40225 353 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 FPGSQ05932 587 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 PKP1Q13835 747 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 SF3A1Q15459 793 aaKnown RBP13.82□□□□□ -0.2
USP1-203ENST00000442679 IL17AQ16552 155 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 TAF2Q6P1X5 1199 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 MTHFD1LQ6UB35 978 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 CHRDL2Q6WN34 429 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 NEK9Q8TD19 979 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 SCLYQ96I15 445 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 NIFKQ9BYG3 293 aaKnown RBP13.82□□□□□ -0.2
USP1-203ENST00000442679 RAB34Q9BZG1 259 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 WNT8AQ9H1J5 351 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 WRAP73Q9P2S5 460 aaPredicted RBP13.82□□□□□ -0.2
USP1-203ENST00000442679 SEPT9Q9UHD8 586 aaPredicted RBP13.82□□□□□ -0.2
USP1-203ENST00000442679 PCDHA2Q9Y5H9 948 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 CLIC4Q9Y696 253 aa13.82□□□□□ -0.2
USP1-203ENST00000442679 TMEM150BA6NC51 233 aa13.81□□□□□ -0.2
USP1-203ENST00000442679 F13A1P00488 732 aa13.81□□□□□ -0.2
USP1-203ENST00000442679 IQCF3P0C7M6 154 aa13.81□□□□□ -0.2
USP1-203ENST00000442679 CSF2RAP15509 400 aa13.81□□□□□ -0.2
USP1-203ENST00000442679 CEBPZQ03701 1054 aaKnown RBP13.81□□□□□ -0.2
USP1-203ENST00000442679 RBL2Q08999 1139 aa13.81□□□□□ -0.2
USP1-203ENST00000442679 PPIGQ13427 754 aaKnown RBP eCLIP13.81□□□□□ -0.2
USP1-203ENST00000442679 ZNF618Q5T7W0 954 aa13.81□□□□□ -0.2
USP1-203ENST00000442679 ARL6IP4Q66PJ3 421 aaKnown RBP13.81□□□□□ -0.2
USP1-203ENST00000442679 ANO5Q75V66 913 aa13.81□□□□□ -0.2
USP1-203ENST00000442679 RSPH3Q86UC2 560 aa13.81□□□□□ -0.2
USP1-203ENST00000442679 C4orf19Q8IY42 314 aa13.81□□□□□ -0.2
USP1-203ENST00000442679 IGSF22Q8N9C0 903 aa13.81□□□□□ -0.2
USP1-203ENST00000442679 DNAJB3Q8WWF6 145 aa13.81□□□□□ -0.2
USP1-203ENST00000442679 POLR3CQ9BUI4 534 aaPredicted RBP13.81□□□□□ -0.2
USP1-203ENST00000442679 FTOQ9C0B1 505 aaKnown RBP eCLIP13.81□□□□□ -0.21e-8■□□□□ 10.2
USP1-203ENST00000442679 UBE2OQ9C0C9 1292 aaKnown RBP13.81□□□□□ -0.2
USP1-203ENST00000442679 FAM49AQ9H0Q0 323 aaPredicted RBP13.81□□□□□ -0.2
USP1-203ENST00000442679 PDE4DIPQ5VU43 2346 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 SMIM35A0A1B0GVV1 85 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 VWA3AA6NCI4 1184 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 RSPH10B2B2RC85 870 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 ZBTB39O15060 712 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 MAGEB2O15479 319 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 CAND2O75155 1236 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 LYPLA2O95372 231 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 C22orf31O95567 290 aa13.8□□□□□ -0.2
USP1-203ENST00000442679 RSPH10BP0C881 870 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms