RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 ICAM3P32942 547 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 PPP1R2P41236 205 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 ZNF746Q6NUN9 644 aaPredicted RBP8.97□□□□□ -0.97
CCDC39-201ENST00000442201 SARM1Q6SZW1 724 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 PIGOQ8TEQ8 1089 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 CCDC102AQ96A19 550 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 DNAJC19Q96DA6 116 aa8.97□□□□□ -0.97
CCDC39-201ENST00000442201 ABT1Q9ULW3 272 aaKnown RBP8.97□□□□□ -0.97
CCDC39-201ENST00000442201 NFASCO94856 1347 aa8.96□□□□□ -0.97
CCDC39-201ENST00000442201 PRCPP42785 496 aa8.96□□□□□ -0.97
CCDC39-201ENST00000442201 QARSP47897 775 aaKnown RBP8.96□□□□□ -0.97
CCDC39-201ENST00000442201 FSTL1Q12841 308 aa8.96□□□□□ -0.97
CCDC39-201ENST00000442201 SEPT14Q6ZU15 432 aa8.96□□□□□ -0.97
CCDC39-201ENST00000442201 CCDC65Q8IXS2 484 aa8.96□□□□□ -0.97
CCDC39-201ENST00000442201 TRMT44Q8IYL2 757 aaKnown RBP8.96□□□□□ -0.97
CCDC39-201ENST00000442201 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.96□□□□□ -0.97
CCDC39-201ENST00000442201 NFE2L3Q9Y4A8 694 aa8.96□□□□□ -0.97
CCDC39-201ENST00000442201 SYNRGQ9UMZ2 1314 aa8.96□□□□□ -0.97
CCDC39-201ENST00000442201 IGF2BP3O00425 579 aaKnown RBP eCLIP8.96□□□□□ -0.98
CCDC39-201ENST00000442201 PSMA7O14818 248 aa8.96□□□□□ -0.98
CCDC39-201ENST00000442201 CCNE2O96020 404 aa8.96□□□□□ -0.98
CCDC39-201ENST00000442201 PAK1Q13153 545 aa8.96□□□□□ -0.98
CCDC39-201ENST00000442201 PSMD2Q13200 908 aa8.96□□□□□ -0.98
CCDC39-201ENST00000442201 ABRAQ8N0Z2 381 aa8.96□□□□□ -0.98
CCDC39-201ENST00000442201 ADSSL1Q8N142 457 aa8.96□□□□□ -0.98
CCDC39-201ENST00000442201 SENP7Q9BQF6 1050 aa8.96□□□□□ -0.98
CCDC39-201ENST00000442201 JPH1Q9HDC5 661 aaPredicted RBP8.96□□□□□ -0.98
CCDC39-201ENST00000442201 PANK4Q9NVE7 773 aa8.96□□□□□ -0.98
CCDC39-201ENST00000442201 FANCLQ9NW38 375 aa8.96□□□□□ -0.98
CCDC39-201ENST00000442201 SLC9A2Q9UBY0 812 aa8.96□□□□□ -0.98
CCDC39-201ENST00000442201 MAPK8IP1Q9UQF2 711 aa8.96□□□□□ -0.98
CCDC39-201ENST00000442201 PCDHA10Q9Y5I2 948 aa8.96□□□□□ -0.98
CCDC39-201ENST00000442201 STX17P56962 302 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 STK4Q13043 487 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 TAF1CQ15572 869 aaPredicted RBP8.95□□□□□ -0.98
CCDC39-201ENST00000442201 SPATA1Q5VX52 437 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 BORCS6Q96GS4 357 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 FGD4Q96M96 766 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 WRAP73Q9P2S5 460 aaPredicted RBP8.95□□□□□ -0.98
CCDC39-201ENST00000442201 RWDD2AQ9UIY3 292 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 CTNND2Q9UQB3 1225 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 ASB14A6NK59 587 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 TMEM88BA6NKF7 163 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 TOMM70O94826 608 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 LYPLA2O95372 231 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 TGFB3P10600 412 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 ADORA2AP29274 412 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 MAPK4P31152 587 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 PSMC5P62195 406 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 TPD52L1Q16890 204 aaPredicted RBP8.95□□□□□ -0.98
CCDC39-201ENST00000442201 ARSHQ5FYA8 562 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 NELFBQ8WX92 580 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 MED15Q96RN5 788 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 CXorf56Q9H5V9 222 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 ARHGEF35A5YM69 484 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 DKC1O60832 514 aaKnown RBP eCLIP8.95□□□□□ -0.98
CCDC39-201ENST00000442201 ZNF75DP51815 510 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 SREBF2Q12772 1141 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 COASYQ13057 564 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 FAM26FQ5R3K3 315 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 EEPD1Q7L9B9 569 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 C4orf19Q8IY42 314 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 OTUD6BQ8N6M0 293 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 DHTKD1Q96HY7 919 aaPredicted RBP8.95□□□□□ -0.98
CCDC39-201ENST00000442201 ZHX3Q9H4I2 956 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 SLC39A2Q9NP94 309 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 CPA4Q9UI42 421 aa8.95□□□□□ -0.98
CCDC39-201ENST00000442201 NPHP3-ACAD11A0A0J9YXS1 232 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 PSAPP07602 524 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 SP4Q02446 784 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 CACNB1Q02641 598 aaPredicted RBP8.94□□□□□ -0.98
CCDC39-201ENST00000442201 EHHADHQ08426 723 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 GIT2Q14161 759 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 NEDD9Q14511 834 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 COBLL1Q53SF7 1204 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 HERC4Q5GLZ8 1057 aaPredicted RBP8.94□□□□□ -0.98
CCDC39-201ENST00000442201 RINT1Q6NUQ1 792 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 KCNV1Q6PIU1 500 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 GPR142Q7Z601 462 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 IFNL1Q8IU54 200 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 ATP6V0A1Q93050 837 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 HPS3Q969F9 1004 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 HHIPL1Q96JK4 782 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 CCDC43Q96MW1 224 aaKnown RBP8.94□□□□□ -0.98
CCDC39-201ENST00000442201 REEP2Q9BRK0 252 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 HSD3B7Q9H2F3 369 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 KCND2Q9NZV8 630 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 ERICH4A6NGS2 130 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 PPP1R12AO14974 1030 aaPredicted RBP8.94□□□□□ -0.98
CCDC39-201ENST00000442201 ZBTB39O15060 712 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 TBCAO75347 108 aaKnown RBP8.94□□□□□ -0.98
CCDC39-201ENST00000442201 ATP1A3P13637 1013 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 ACTR2P61160 394 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 SP2Q02086 613 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 CYFIP1Q7L576 1253 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 PLEKHH3Q7Z736 793 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 RPAINQ86UA6 219 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 SUGP1Q8IWZ8 645 aaKnown RBP8.94□□□□□ -0.98
CCDC39-201ENST00000442201 KIAA0895Q8NCT3 520 aa8.94□□□□□ -0.98
CCDC39-201ENST00000442201 MORC4Q8TE76 937 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms