RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SPZ1Q9BXG8 430 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 TRIM6Q9C030 488 aaPredicted RBP8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 PDGFCQ9NRA1 345 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 ST7Q9NRC1 585 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 MSRAQ9UJ68 235 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 BIN1O00499 593 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 SASH3O75995 380 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 THPOP40225 353 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 GOLGA8FQ08AF8 430 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 GOLGA8DPQ0D2H9 430 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 ITGA7Q13683 1181 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 INF2Q27J81 1249 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 SRBD1Q8N5C6 995 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 MSL3Q8N5Y2 521 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 SEPT1Q8WYJ6 367 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 PHF20Q9BVI0 1012 aa8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 RANBP17Q9H2T7 1088 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-208ENST00000442054 GREB1LQ9C091 1923 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 M0R2N6 131 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 CHRM1P11229 460 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 BMS1Q14692 1282 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 LRRC41Q15345 812 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 IL17AQ16552 155 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 DRC7Q8IY82 874 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 COPS5Q92905 334 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 WDR24Q96S15 920 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 PDCD2LQ9BRP1 358 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 RNF26Q9BY78 433 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 HIPK3Q9H422 1215 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 KCNH3Q9ULD8 1083 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 PCDHB6Q9Y5E3 794 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 A0A0U1RQJ8 604 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 LRRC10BA6NIK2 292 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 BTBD18B2RXH4 712 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 ACLYP53396 1101 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 PPFIA1Q13136 1202 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 ERCC6LQ2NKX8 1250 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 SYT10Q6XYQ8 523 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 MAEAQ7L5Y9 396 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 SIAH1Q8IUQ4 282 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 DIS3L2Q8IYB7 885 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 C4orf32Q8N8J7 132 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 ATRIPQ8WXE1 791 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 CCDC47Q96A33 483 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 MRFAP1Q9Y605 127 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 MOXD2PA6NHM9 499 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 PPP1R3GB7ZBB8 358 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 GTPBP6O43824 516 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 UBA7P41226 1012 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 TBC1D8BQ0IIM8 1120 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 TROAPQ12815 778 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 AP3B2Q13367 1082 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 KIAA0753Q2KHM9 967 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 OLFML2BQ68BL8 750 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 TOGARAM2Q6ZUX3 1019 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 TPH2Q8IWU9 490 aa8.19□□□□□ -1.1
CDC42BPA-208ENST00000442054 UTRNP46939 3433 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 PALM3A6NDB9 673 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 PSMC6P62333 389 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 FAM193AP78312 1265 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 PTPN21Q16825 1174 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 TRIM60Q495X7 471 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 SLC28A3Q9HAS3 691 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 SEPT9Q9UHD8 586 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 MAD2L2Q9UI95 211 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 V9GYY5 206 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 BAZ2BQ9UIF8 2168 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 LRRC37AA6NMS7 1700 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 FAM205CA6NFA0 338 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 BECN2A8MW95 431 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 DNM1LO00429 736 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 PSAPP07602 524 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 STAT5BP51692 787 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 CT47A1Q5JQC4 288 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 OTUD6AQ7L8S5 288 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 OTOP2Q7RTS6 562 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 TRIML1Q8N9V2 468 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 ANKLE1Q8NAG6 615 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 TBCKQ8TEA7 893 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 DIS3LQ8TF46 1054 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 ARID3AQ99856 593 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 JPH1Q9HDC5 661 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 PXMP2Q9NR77 195 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 SLC9A2Q9UBY0 812 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 C17orf102A2RUQ5 167 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 H3BRB1 525 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 CLTBP09497 229 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 CYP2C9P11712 490 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 NR5A1Q13285 461 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 CEP55Q53EZ4 464 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 KRI1Q8N9T8 703 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 CFHR5Q9BXR6 569 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 SMARCAD1Q9H4L7 1026 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 TUT1Q9H6E5 874 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 MRPL44Q9H9J2 332 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 TMEM260Q9NX78 707 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 DDX25Q9UHL0 483 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 GJD2Q9UKL4 321 aa8.18□□□□□ -1.1
CDC42BPA-208ENST00000442054 CEP131Q9UPN4 1083 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms