RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 REV3LO60673 3130 aa21.46■■□□□ 1.03
HMGB3P22-201ENST00000442010 SPTBN5Q9NRC6 3674 aaKnown RBP21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 RFXAPO00287 272 aa21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 MSH4O15457 936 aa21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 HTRA4P83105 476 aaPredicted RBP21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 LPIN1Q14693 890 aa21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 FAM160B1Q5W0V3 765 aa21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 SWSAP1Q6NVH7 229 aa21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 MIS18BP1Q6P0N0 1132 aa21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 MTHFD1LQ6UB35 978 aa21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 SMAP1Q8IYB5 467 aaPredicted RBP21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 ATP8B4Q8TF62 1192 aa21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 ZBED2Q9BTP6 218 aa21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 IFIH1Q9BYX4 1025 aaKnown RBP21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 C22orf23Q9BZE7 217 aa21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 MAFBQ9Y5Q3 323 aaPredicted RBP21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 CDY2AQ9Y6F7 541 aa21.45■■□□□ 1.02
HMGB3P22-201ENST00000442010 CYP3A7-CYP3A51PA0A087WV96 503 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 ZBTB42B2RXF5 422 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 BACH1O14867 736 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 HBP1O60381 514 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 CDKL5O76039 1030 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 AMHP03971 560 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 RPLP2P05387 115 aaKnown RBP21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 IGFBP4P22692 258 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 CYP3A7P24462 503 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 MRPS6P82932 125 aaKnown RBP21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 KRT76Q01546 638 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 ANKRD1Q15327 319 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 FBXO47Q5MNV8 452 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 MYOCDQ8IZQ8 938 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 SLC5A5Q92911 643 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 TOP1MTQ969P6 601 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 MBOAT7Q96N66 472 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 PHF20Q9BVI0 1012 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 PCDHA10Q9Y5I2 948 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 COL1A2P08123 1366 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 COL4A6Q14031 1691 aa21.44■■□□□ 1.02
HMGB3P22-201ENST00000442010 SMIM35A0A1B0GVV1 85 aa21.43■■□□□ 1.02
HMGB3P22-201ENST00000442010 GHRP10912 638 aa21.43■■□□□ 1.02
HMGB3P22-201ENST00000442010 Q4G0T1 1027 aa21.43■■□□□ 1.02
HMGB3P22-201ENST00000442010 FAM117BQ6P1L5 589 aa21.43■■□□□ 1.02
HMGB3P22-201ENST00000442010 PDXDC2PQ6P474 469 aa21.43■■□□□ 1.02
HMGB3P22-201ENST00000442010 SP7Q8TDD2 431 aaPredicted RBP21.43■■□□□ 1.02
HMGB3P22-201ENST00000442010 ARNTL2Q8WYA1 636 aa21.43■■□□□ 1.02
HMGB3P22-201ENST00000442010 FAM49AQ9H0Q0 323 aaPredicted RBP21.43■■□□□ 1.02
HMGB3P22-201ENST00000442010 KCNJ14Q9UNX9 436 aa21.43■■□□□ 1.02
HMGB3P22-201ENST00000442010 RALGAPA2Q2PPJ7 1873 aa21.43■■□□□ 1.02
HMGB3P22-201ENST00000442010 LINC01553A4QN01 128 aa21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 DLL1O00548 723 aa21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 LPXNO60711 386 aa21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 EIF5BO60841 1220 aaKnown RBP21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 DTNBO60941 627 aa21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 LARGE1O95461 756 aa21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 ME3Q16798 604 aa21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 MOXD1Q6UVY6 613 aa21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 RIT2Q99578 217 aa21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 AGO3Q9H9G7 860 aaKnown RBP21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 IGSF9BQ9UPX0 1349 aa21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 INSL6Q9Y581 213 aa21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 MTCH2Q9Y6C9 303 aa21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 SQORQ9Y6N5 450 aa21.42■■□□□ 1.02
HMGB3P22-201ENST00000442010 KDM3AQ9Y4C1 1321 aa21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 TDP2O95551 362 aa21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 PSAPP07602 524 aa21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 FDPSP14324 419 aaKnown RBP21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 KLRC1P26715 233 aa21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 ERVK-21P61565 698 aa21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 ZNF484Q5JVG2 852 aa21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 IER5Q5VY09 327 aa21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 B3GNT9Q6UX72 402 aa21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 TSHZ1Q6ZSZ6 1077 aa21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 NME8Q8N427 588 aa21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 BBXQ8WY36 941 aaPredicted RBP21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 GJA10Q969M2 543 aa21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 PRDM6Q9NQX0 595 aa21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 GJB4Q9NTQ9 266 aa21.41■■□□□ 1.02
HMGB3P22-201ENST00000442010 PSMD10O75832 226 aa21.4■■□□□ 1.02
HMGB3P22-201ENST00000442010 TMEM62Q0P6H9 643 aa21.4■■□□□ 1.02
HMGB3P22-201ENST00000442010 NONOQ15233 471 aaKnown RBP eCLIP21.4■■□□□ 1.02
HMGB3P22-201ENST00000442010 NECAB1Q8N987 351 aa21.4■■□□□ 1.02
HMGB3P22-201ENST00000442010 PPM1EQ8WY54 764 aa21.4■■□□□ 1.02
HMGB3P22-201ENST00000442010 GTF3C6Q969F1 213 aa21.4■■□□□ 1.02
HMGB3P22-201ENST00000442010 GABBR1Q9UBS5 961 aa21.4■■□□□ 1.02
HMGB3P22-201ENST00000442010 TRPV2Q9Y5S1 764 aa21.4■■□□□ 1.02
HMGB3P22-201ENST00000442010 BRWD1Q9NSI6 2320 aa21.4■■□□□ 1.02
HMGB3P22-201ENST00000442010 WDR64B1ANS9 1081 aa21.39■■□□□ 1.01
HMGB3P22-201ENST00000442010 C22orf31O95567 290 aa21.39■■□□□ 1.01
HMGB3P22-201ENST00000442010 GRB10Q13322 594 aa21.39■■□□□ 1.01
HMGB3P22-201ENST00000442010 CCDC85BQ15834 202 aaPredicted RBP21.39■■□□□ 1.01
HMGB3P22-201ENST00000442010 INF2Q27J81 1249 aa21.39■■□□□ 1.01
HMGB3P22-201ENST00000442010 KRT25Q7Z3Z0 450 aa21.39■■□□□ 1.01
HMGB3P22-201ENST00000442010 KIAA0319LQ8IZA0 1049 aa21.39■■□□□ 1.01
HMGB3P22-201ENST00000442010 ETNPPLQ8TBG4 499 aa21.39■■□□□ 1.01
HMGB3P22-201ENST00000442010 TGS1Q96RS0 853 aaKnown RBP21.39■■□□□ 1.01
HMGB3P22-201ENST00000442010 COL25A1Q9BXS0 654 aaPredicted RBP21.39■■□□□ 1.01
HMGB3P22-201ENST00000442010 CELF4Q9BZC1 486 aaKnown RBP21.39■■□□□ 1.01
HMGB3P22-201ENST00000442010 UNC45AQ9H3U1 944 aa21.39■■□□□ 1.01
HMGB3P22-201ENST00000442010 DISC1Q9NRI5 854 aa21.39■■□□□ 1.01
HMGB3P22-201ENST00000442010 ORC3Q9UBD5 711 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms