RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 ZNF577Q9BSK1 485 aa13.57□□□□□ -0.24
PDGFB-203ENST00000440375 CYP46A1Q9Y6A2 500 aa13.57□□□□□ -0.24
PDGFB-203ENST00000440375 ZBTB42B2RXF5 422 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 EPB41L2O43491 1005 aaKnown RBP13.56□□□□□ -0.24
PDGFB-203ENST00000440375 DTNBO60941 627 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 ATP4AP20648 1035 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 GNA11P29992 359 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 CD52P31358 61 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 KCNQ1P51787 676 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 SETQ01105 290 aaPredicted RBP13.56□□□□□ -0.24
PDGFB-203ENST00000440375 STK3Q13188 491 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 TSHZ1Q6ZSZ6 1077 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 FBXO22Q8NEZ5 403 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 CCDC148Q8NFR7 591 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 ADAMTS19Q8TE59 1207 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 ATP8B4Q8TF62 1192 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 SYMPKQ92797 1274 aaKnown RBP13.56□□□□□ -0.24
PDGFB-203ENST00000440375 NECAB3Q96P71 396 aaPredicted RBP13.56□□□□□ -0.24
PDGFB-203ENST00000440375 TM6SF1Q9BZW5 370 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 PCDHA2Q9Y5H9 948 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 KAT6AQ92794 2004 aa13.56□□□□□ -0.24
PDGFB-203ENST00000440375 CIITAP33076 1130 aa13.55□□□□□ -0.24
PDGFB-203ENST00000440375 NPY5RQ15761 445 aa13.55□□□□□ -0.24
PDGFB-203ENST00000440375 EPC2Q52LR7 807 aa13.55□□□□□ -0.24
PDGFB-203ENST00000440375 SWSAP1Q6NVH7 229 aa13.55□□□□□ -0.24
PDGFB-203ENST00000440375 PDXDC2PQ6P474 469 aa13.55□□□□□ -0.24
PDGFB-203ENST00000440375 MTHFD1LQ6UB35 978 aa13.55□□□□□ -0.24
PDGFB-203ENST00000440375 GJA10Q969M2 543 aa13.55□□□□□ -0.24
PDGFB-203ENST00000440375 RC3H2Q9HBD1 1191 aaKnown RBP13.55□□□□□ -0.24
PDGFB-203ENST00000440375 ZNF302Q9NR11 478 aa13.55□□□□□ -0.24
PDGFB-203ENST00000440375 TRPV2Q9Y5S1 764 aa13.55□□□□□ -0.24
PDGFB-203ENST00000440375 SMIM35A0A1B0GVV1 85 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 ENPP3O14638 875 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 LINC00271P0C7V0 271 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 KLRC1P26715 233 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 SLC26A2P50443 739 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 NLRP5P59047 1200 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 TMEM266Q2M3C6 531 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 FAM160B1Q5W0V3 765 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 MCTP2Q6DN12 878 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 ZNF746Q6NUN9 644 aaPredicted RBP13.54□□□□□ -0.24
PDGFB-203ENST00000440375 MIS18BP1Q6P0N0 1132 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 TRMT1LQ7Z2T5 733 aaKnown RBP13.54□□□□□ -0.24
PDGFB-203ENST00000440375 BICD2Q8TD16 824 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 ZNF274Q96GC6 653 aaPredicted RBP13.54□□□□□ -0.24
PDGFB-203ENST00000440375 TSPYL2Q9H2G4 693 aaPredicted RBP13.54□□□□□ -0.24
PDGFB-203ENST00000440375 PDRG1Q9NUG6 133 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 PPP4R2Q9NY27 417 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 IGSF9BQ9UPX0 1349 aa13.54□□□□□ -0.24
PDGFB-203ENST00000440375 BDP1A6H8Y1 2624 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 MSH4O15457 936 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 HBP1O60381 514 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 C22orf31O95567 290 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 BMP1P13497 986 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 SSRP1Q08945 709 aaKnown RBP13.53□□□□□ -0.24
PDGFB-203ENST00000440375 UGCGQ16739 394 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 IER5Q5VY09 327 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 RTN4RL1Q86UN2 441 aaPredicted RBP13.53□□□□□ -0.24
PDGFB-203ENST00000440375 TMEM192Q8IY95 271 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 TRIM22Q8IYM9 498 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 KIAA0319LQ8IZA0 1049 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 TMEM40Q8WWA1 233 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 PPP1R16BQ96T49 567 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 UHRF1Q96T88 793 aaPredicted RBP13.53□□□□□ -0.24
PDGFB-203ENST00000440375 CELF4Q9BZC1 486 aaKnown RBP13.53□□□□□ -0.24
PDGFB-203ENST00000440375 TMX1Q9H3N1 280 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 CDHR5Q9HBB8 845 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 SH3GLB2Q9NR46 395 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 TBC1D22BQ9NU19 505 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 PADI3Q9ULW8 664 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 MAFBQ9Y5Q3 323 aaPredicted RBP13.53□□□□□ -0.24
PDGFB-203ENST00000440375 ADGRA3Q8IWK6 1321 aa13.53□□□□□ -0.24
PDGFB-203ENST00000440375 M0QZ92 97 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 M0R2N6 131 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 TNFRSF10AO00220 468 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 CPLX1O14810 134 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 ZNF862O60290 1169 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 DEXIO95424 95 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 TDP2O95551 362 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 KRT76Q01546 638 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 SCRN1Q12765 414 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 PAK2Q13177 524 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 CKAP2LQ8IYA6 745 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 SMAP1Q8IYB5 467 aaPredicted RBP13.52□□□□□ -0.25
PDGFB-203ENST00000440375 TBCKQ8TEA7 893 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 TNPO1Q92973 898 aaKnown RBP13.52□□□□□ -0.25
PDGFB-203ENST00000440375 HLA-CQ95604 372 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 IL17RAQ96F46 866 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 LMCD1Q9NZU5 365 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 GABBR1Q9UBS5 961 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 TPCN1Q9ULQ1 816 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 PCDHA4Q9UN74 947 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 GINS2Q9Y248 185 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 KDM3AQ9Y4C1 1321 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 COL1A2P08123 1366 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 BRWD1Q9NSI6 2320 aa13.52□□□□□ -0.25
PDGFB-203ENST00000440375 NLRC5Q86WI3 1866 aa13.51□□□□□ -0.25
PDGFB-203ENST00000440375 H3BNC9 293 aa13.51□□□□□ -0.25
PDGFB-203ENST00000440375 CHMP2AO43633 222 aa13.51□□□□□ -0.25
PDGFB-203ENST00000440375 MGEA5O60502 916 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms