RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 PIH1D3Q9NQM4 214 aaKnown RBP12.48□□□□□ -0.41
CCBE1-202ENST00000439986 H7C1W4 665 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 SEMA3EO15041 775 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 MRPS25P82663 173 aaKnown RBP12.48□□□□□ -0.41
CCBE1-202ENST00000439986 SOS2Q07890 1332 aaPredicted RBP12.48□□□□□ -0.41
CCBE1-202ENST00000439986 KRT38O76015 456 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 ARPP19P56211 112 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 VEPH1Q14D04 833 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 JADE1Q6IE81 842 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 MCUQ8NE86 351 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 PPP4R1Q8TF05 950 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 ARHGEF40Q8TER5 1519 aa12.48□□□□□ -0.41
CCBE1-202ENST00000439986 KLRF2D3W0D1 207 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 LGSNQ5TDP6 509 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 KIAA0825Q8IV33 1275 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 RNF10Q8N5U6 811 aaKnown RBP12.47□□□□□ -0.41
CCBE1-202ENST00000439986 ZNF653Q96CK0 615 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 HOOK2Q96ED9 719 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 CSADQ9Y600 493 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 MAD1L1Q9Y6D9 718 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 AXIN1O15169 862 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 STAT1P42224 750 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 TRIM60Q495X7 471 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 CCDC127Q96BQ5 260 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 MAGEF1Q9HAY2 307 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 ARMCX3Q9UH62 379 aaPredicted RBP12.47□□□□□ -0.41
CCBE1-202ENST00000439986 GDAQ9Y2T3 454 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 HECW2Q9P2P5 1572 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 ESYT2A0FGR8 921 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 POTEB3A0JP26 581 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 OPHN1O60890 802 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 EXOSC10Q01780 885 aaKnown RBP12.47□□□□□ -0.41
CCBE1-202ENST00000439986 LLGL1Q15334 1064 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 POTEBQ6S5H4 581 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 MB21D1Q8N884 522 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 LZICQ8WZA0 190 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 HAUS1Q96CS2 278 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 HDAC11Q96DB2 347 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 SCHIP1Q9P0W5 487 aaPredicted RBP12.47□□□□□ -0.41
CCBE1-202ENST00000439986 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 EIF4A3P38919 411 aaKnown RBP12.47□□□□□ -0.41
CCBE1-202ENST00000439986 FAM26FQ5R3K3 315 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 ANKRD20A3Q5VUR7 823 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 CYB5R4Q7L1T6 521 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 TADA2BQ86TJ2 420 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.47□□□□□ -0.41
CCBE1-202ENST00000439986 ABCC12Q96J65 1359 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 MAP3K15Q6ZN16 1313 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 B3GALNT1O75752 331 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 TNNC2P02585 160 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 H2AFZP0C0S5 128 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 CDC27P30260 824 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 PUS10Q3MIT2 529 aaKnown RBP12.47□□□□□ -0.41
CCBE1-202ENST00000439986 MFSD14BQ5SR56 506 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 GALNT17Q6IS24 598 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 H2AFVQ71UI9 128 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 METTL16Q86W50 562 aaKnown RBP12.47□□□□□ -0.41
CCBE1-202ENST00000439986 CUEDC2Q9H467 287 aa12.47□□□□□ -0.41
CCBE1-202ENST00000439986 DDX25Q9UHL0 483 aaKnown RBP12.47□□□□□ -0.41
CCBE1-202ENST00000439986 LRRIQ4A6NIV6 560 aa12.46□□□□□ -0.41
CCBE1-202ENST00000439986 GNL1P36915 607 aaPredicted RBP12.46□□□□□ -0.41
CCBE1-202ENST00000439986 MCAMP43121 646 aa12.46□□□□□ -0.41
CCBE1-202ENST00000439986 USPL1Q5W0Q7 1092 aa12.46□□□□□ -0.41
CCBE1-202ENST00000439986 ELMSAN1Q6PJG2 1045 aa12.46□□□□□ -0.41
CCBE1-202ENST00000439986 SPICE1Q8N0Z3 855 aa12.46□□□□□ -0.41
CCBE1-202ENST00000439986 ZNF579Q8NAF0 562 aaKnown RBP12.46□□□□□ -0.41
CCBE1-202ENST00000439986 HP1BP3Q5SSJ5 553 aaPredicted RBP12.46□□□□□ -0.41
CCBE1-202ENST00000439986 ATP2A3Q93084 1043 aa12.46□□□□□ -0.41
CCBE1-202ENST00000439986 THAP9Q9H5L6 903 aa12.46□□□□□ -0.41
CCBE1-202ENST00000439986 GGCXP38435 758 aa12.46□□□□□ -0.41
CCBE1-202ENST00000439986 PDZD8Q8NEN9 1154 aa12.46□□□□□ -0.41
CCBE1-202ENST00000439986 STRBPQ96SI9 672 aaKnown RBP12.46□□□□□ -0.41
CCBE1-202ENST00000439986 PSTPIP2Q9H939 334 aa12.46□□□□□ -0.41
CCBE1-202ENST00000439986 PAPOLBQ9NRJ5 636 aaKnown RBP12.46□□□□□ -0.41
CCBE1-202ENST00000439986 MOSPD1Q9UJG1 213 aa12.46□□□□□ -0.41
CCBE1-202ENST00000439986 PRPF3O43395 683 aaKnown RBP12.46□□□□□ -0.42
CCBE1-202ENST00000439986 FTCDO95954 541 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 CCNE1P24864 410 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 PDE6CP51160 858 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 CHRNDQ07001 517 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 CCDC157Q569K6 752 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 GSPT2Q8IYD1 628 aaKnown RBP12.46□□□□□ -0.42
CCBE1-202ENST00000439986 IQGAP1P46940 1657 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 CLRN2A0PK11 232 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 MX2P20592 715 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 HOXC8P31273 242 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 SLC8A1P32418 973 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 CACNB1Q02641 598 aaPredicted RBP12.46□□□□□ -0.42
CCBE1-202ENST00000439986 CYP4A11Q02928 519 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 ADAM9Q13443 819 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 SNX1Q13596 522 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 ALS2CLQ60I27 953 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 C1orf228Q6PIY5 440 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 HOMER3Q9NSC5 361 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 USP21Q9UK80 565 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 PCDHA4Q9UN74 947 aa12.46□□□□□ -0.42
CCBE1-202ENST00000439986 PCP11498 1178 aaKnown RBP12.45□□□□□ -0.42
CCBE1-202ENST00000439986 MAN2A1Q16706 1144 aa12.45□□□□□ -0.42
CCBE1-202ENST00000439986 RAPH1Q70E73 1250 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms