RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ATP2A1O14983 1001 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 ATP8B1O43520 1251 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 ACTN4O43707 911 aaKnown RBP5.3□□□□□ -1.56
EDEM3-203ENST00000439962 LONP1P36776 959 aaKnown RBP5.3□□□□□ -1.56
EDEM3-203ENST00000439962 PRPHP41219 470 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 NOVP48745 357 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 TOB1P50616 345 aaPredicted RBP5.3□□□□□ -1.56
EDEM3-203ENST00000439962 TTLL4Q14679 1199 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 CCDC148Q8NFR7 591 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 PANX2Q96RD6 677 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 HSD3B7Q9H2F3 369 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 TCEAL9Q9UHQ7 104 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 PCDHA6Q9UN73 950 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 PCDHA8Q9Y5H6 950 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 NCOR1O75376 2440 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 GREB1LQ9C091 1923 aaPredicted RBP5.3□□□□□ -1.56
EDEM3-203ENST00000439962 BRWD1Q9NSI6 2320 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 FAM205CA6NFA0 338 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 MARCH6O60337 910 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 RGS20O76081 388 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 ADCY7P51828 1080 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 UBASH3AP57075 661 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 MRPS9P82933 396 aaKnown RBP5.3□□□□□ -1.56
EDEM3-203ENST00000439962 NR5A1Q13285 461 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 PKN1Q16512 942 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 PFKFB3Q16875 520 aaPredicted RBP5.3□□□□□ -1.56
EDEM3-203ENST00000439962 COBLL1Q53SF7 1204 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 PRR16Q569H4 304 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 SLC39A5Q6ZMH5 540 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 SCFD2Q8WU76 684 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 PPM1EQ8WY54 764 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 GLG1Q92896 1179 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 CERS4Q9HA82 394 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 IFNKQ9P0W0 207 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 NRBP1Q9UHY1 535 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 MAN1B1Q9UKM7 699 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 TRIM43BA6NCK2 446 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 GRXCR1A8MXD5 290 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 DNM1LO00429 736 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 BACH1O14867 736 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 MSCO60682 206 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 ADAMTS4O75173 837 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 DUSP11O75319 330 aaKnown RBP5.3□□□□□ -1.56
EDEM3-203ENST00000439962 SLU7O95391 586 aaKnown RBP5.3□□□□□ -1.56
EDEM3-203ENST00000439962 FDX1P10109 184 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 SCG2P13521 617 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 CSF2RAP15509 400 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 COPB2P35606 906 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 ITGA7Q13683 1181 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 LETM2Q2VYF4 491 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 NBPF20Q3BBV1 942 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 LONRF3Q496Y0 759 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 C9orf50Q5SZB4 431 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 SPATA1Q5VX52 437 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 TRMT44Q8IYL2 757 aaKnown RBP5.3□□□□□ -1.56
EDEM3-203ENST00000439962 ZNF710Q8N1W2 664 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 ZNF397Q8NF99 534 aaPredicted RBP5.3□□□□□ -1.56
EDEM3-203ENST00000439962 OXER1Q8TDS5 423 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 NOC3LQ8WTT2 800 aaKnown RBP5.3□□□□□ -1.56
EDEM3-203ENST00000439962 CCDC12Q8WUD4 166 aaPredicted RBP5.3□□□□□ -1.56
EDEM3-203ENST00000439962 TRAPPC12Q8WVT3 735 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 TRIM43Q96BQ3 446 aaPredicted RBP5.3□□□□□ -1.56
EDEM3-203ENST00000439962 AK8Q96MA6 479 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 CRISPLD2Q9H0B8 497 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 MTUS1Q9ULD2 1270 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 PCDHA5Q9Y5H7 936 aa5.3□□□□□ -1.56
EDEM3-203ENST00000439962 PLXNA1Q9UIW2 1896 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 SYNGAP1Q96PV0 1343 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 A0A1B0GTH6 734 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 BTBD18B2RXH4 712 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 STXBP3O00186 592 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 TUBBP07437 444 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 ARP10275 920 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 ITGB5P18084 799 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 UBA1P22314 1058 aaKnown RBP5.29□□□□□ -1.56
EDEM3-203ENST00000439962 TXLNAP40222 546 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 LRMPQ12912 555 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 MTMR1Q13613 665 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 KCNB1Q14721 858 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 INF2Q27J81 1249 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 KIAA0753Q2KHM9 967 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 SPECC1LQ69YQ0 1117 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 ARMCX5Q6P1M9 558 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 PIK3AP1Q6ZUJ8 805 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 IQUBQ8NA54 791 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 PPP1R13BQ96KQ4 1090 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 MPHOSPH6Q99547 160 aaKnown RBP5.29□□□□□ -1.56
EDEM3-203ENST00000439962 SPZ1Q9BXG8 430 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 FAM49AQ9H0Q0 323 aaPredicted RBP5.29□□□□□ -1.56
EDEM3-203ENST00000439962 POLD4Q9HCU8 107 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 OGFRQ9NZT2 677 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 MYO1AQ9UBC5 1043 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 USP34Q70CQ2 3546 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 ESYT2A0FGR8 921 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 TMEM150BA6NC51 233 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 LRRC10BA6NIK2 292 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 DCDC2CA8MYV0 355 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 GTPBP6O43824 516 aaPredicted RBP5.29□□□□□ -1.56
EDEM3-203ENST00000439962 B4GALT4O60513 344 aa5.29□□□□□ -1.56
EDEM3-203ENST00000439962 PLA2G6O60733 806 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms