RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 CAMK4Q16566 473 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 DGKDQ16760 1214 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 UTP14CQ5TAP6 766 aaKnown RBP23.11■■□□□ 1.29
CHD3-204ENST00000439235 PLPPR4Q7Z2D5 763 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 SH3RF1Q7Z6J0 888 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 GLG1Q92896 1179 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 LENG1Q96BZ8 264 aaPredicted RBP23.11■■□□□ 1.29
CHD3-204ENST00000439235 PAGE5Q96GU1 130 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 FAM167AQ96KS9 214 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 CCDC43Q96MW1 224 aaKnown RBP23.11■■□□□ 1.29
CHD3-204ENST00000439235 SMARCAD1Q9H4L7 1026 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 KBTBD4Q9NVX7 518 aa23.11■■□□□ 1.29
CHD3-204ENST00000439235 MSCO60682 206 aa23.1■■□□□ 1.29
CHD3-204ENST00000439235 PPFIA4O75335 1185 aa23.1■■□□□ 1.29
CHD3-204ENST00000439235 LETM1O95202 739 aaPredicted RBP23.1■■□□□ 1.29
CHD3-204ENST00000439235 SSBP05455 408 aaKnown RBP eCLIP23.1■■□□□ 1.29
CHD3-204ENST00000439235 MYL1P05976 194 aa23.1■■□□□ 1.29
CHD3-204ENST00000439235 HOXD8P13378 290 aaPredicted RBP23.1■■□□□ 1.29
CHD3-204ENST00000439235 AFMP43652 599 aa23.1■■□□□ 1.29
CHD3-204ENST00000439235 MCM6Q14566 821 aa23.1■■□□□ 1.29
CHD3-204ENST00000439235 POSTNQ15063 836 aa23.1■■□□□ 1.29
CHD3-204ENST00000439235 XKR3Q5GH77 459 aa23.1■■□□□ 1.29
CHD3-204ENST00000439235 OTUD6AQ7L8S5 288 aa23.1■■□□□ 1.29
CHD3-204ENST00000439235 CKAP2LQ8IYA6 745 aa23.1■■□□□ 1.29
CHD3-204ENST00000439235 PCYT2Q99447 389 aa23.1■■□□□ 1.29
CHD3-204ENST00000439235 HMX1Q9NP08 348 aaPredicted RBP23.1■■□□□ 1.29
CHD3-204ENST00000439235 ANKEF1Q9NU02 776 aa23.1■■□□□ 1.29
CHD3-204ENST00000439235 DBR1Q9UK59 544 aaKnown RBP23.1■■□□□ 1.29
CHD3-204ENST00000439235 A6NJR5 290 aa23.09■■□□□ 1.29
CHD3-204ENST00000439235 ZNF862O60290 1169 aa23.09■■□□□ 1.29
CHD3-204ENST00000439235 LGALS2P05162 132 aa23.09■■□□□ 1.29
CHD3-204ENST00000439235 YWHABP31946 246 aaKnown RBP23.09■■□□□ 1.29
CHD3-204ENST00000439235 GJA9P57773 515 aa23.09■■□□□ 1.29
CHD3-204ENST00000439235 PSMC6P62333 389 aa23.09■■□□□ 1.29
CHD3-204ENST00000439235 PIGOQ8TEQ8 1089 aa23.09■■□□□ 1.29
CHD3-204ENST00000439235 ANP32EQ9BTT0 268 aa23.09■■□□□ 1.29
CHD3-204ENST00000439235 UPF3AQ9H1J1 476 aaKnown RBP23.09■■□□□ 1.29
CHD3-204ENST00000439235 BHMT2Q9H2M3 363 aa23.09■■□□□ 1.29
CHD3-204ENST00000439235 DDX20Q9UHI6 824 aaKnown RBP23.09■■□□□ 1.29
CHD3-204ENST00000439235 ZNF215Q9UL58 517 aaPredicted RBP23.09■■□□□ 1.29
CHD3-204ENST00000439235 ARHGEF35A5YM69 484 aa23.08■■□□□ 1.29
CHD3-204ENST00000439235 GTPBP6O43824 516 aaPredicted RBP23.08■■□□□ 1.29
CHD3-204ENST00000439235 OATP04181 439 aa23.08■■□□□ 1.29
CHD3-204ENST00000439235 SLC9C1Q4G0N8 1177 aa23.08■■□□□ 1.29
CHD3-204ENST00000439235 GRAMD1CQ8IYS0 662 aa23.08■■□□□ 1.29
CHD3-204ENST00000439235 SYT2Q8N9I0 419 aaPredicted RBP23.08■■□□□ 1.29
CHD3-204ENST00000439235 ERAP1Q9NZ08 941 aa23.08■■□□□ 1.29
CHD3-204ENST00000439235 SYNRGQ9UMZ2 1314 aa23.08■■□□□ 1.28
CHD3-204ENST00000439235 SMC2O95347 1197 aa23.07■■□□□ 1.28
CHD3-204ENST00000439235 SLC12A3P55017 1021 aa23.07■■□□□ 1.28
CHD3-204ENST00000439235 NKX3-2P78367 333 aa23.07■■□□□ 1.28
CHD3-204ENST00000439235 DHX8Q14562 1220 aaKnown RBP23.07■■□□□ 1.28
CHD3-204ENST00000439235 PKN2Q16513 984 aaKnown RBP23.07■■□□□ 1.28
CHD3-204ENST00000439235 FSCN1Q16658 493 aaKnown RBP23.07■■□□□ 1.28
CHD3-204ENST00000439235 GPBP1Q86WP2 473 aa23.07■■□□□ 1.28
CHD3-204ENST00000439235 TRIM50Q86XT4 487 aa23.07■■□□□ 1.28
CHD3-204ENST00000439235 SH3TC2Q8TF17 1288 aa23.07■■□□□ 1.28
CHD3-204ENST00000439235 XPNPEP3Q9NQH7 507 aa23.07■■□□□ 1.28
CHD3-204ENST00000439235 NRBP2Q9NSY0 501 aa23.07■■□□□ 1.28
CHD3-204ENST00000439235 BMP2KQ9NSY1 1161 aaPredicted RBP23.07■■□□□ 1.28
CHD3-204ENST00000439235 SEPT9Q9UHD8 586 aaPredicted RBP23.07■■□□□ 1.28
CHD3-204ENST00000439235 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.06■■□□□ 1.28
CHD3-204ENST00000439235 ZEB2O60315 1214 aa23.06■■□□□ 1.28
CHD3-204ENST00000439235 KPNA6O60684 536 aa23.06■■□□□ 1.28
CHD3-204ENST00000439235 C6orf222P0C671 652 aaPredicted RBP23.06■■□□□ 1.28
CHD3-204ENST00000439235 PRR29P0C7W0 189 aa23.06■■□□□ 1.28
CHD3-204ENST00000439235 RARRES1P49788 294 aa23.06■■□□□ 1.28
CHD3-204ENST00000439235 MDM2Q00987 491 aaPredicted RBP23.06■■□□□ 1.28
CHD3-204ENST00000439235 PNOCQ13519 176 aa23.06■■□□□ 1.28
CHD3-204ENST00000439235 FBXO46Q6PJ61 603 aaPredicted RBP23.06■■□□□ 1.28
CHD3-204ENST00000439235 RBM43Q6ZSC3 357 aaKnown RBP23.06■■□□□ 1.28
CHD3-204ENST00000439235 ATP8B4Q8TF62 1192 aa23.06■■□□□ 1.28
CHD3-204ENST00000439235 STAMQ92783 540 aa23.06■■□□□ 1.28
CHD3-204ENST00000439235 MTRQ99707 1265 aa23.06■■□□□ 1.28
CHD3-204ENST00000439235 C7orf25Q9BPX7 421 aa23.06■■□□□ 1.28
CHD3-204ENST00000439235 TRIM9Q9C026 710 aa23.06■■□□□ 1.28
CHD3-204ENST00000439235 KCND2Q9NZV8 630 aa23.06■■□□□ 1.28
CHD3-204ENST00000439235 A0A087WWV3 80 aa23.05■■□□□ 1.28
CHD3-204ENST00000439235 STBD1O95210 358 aa23.05■■□□□ 1.28
CHD3-204ENST00000439235 ZNF286BP0CG31 522 aa23.05■■□□□ 1.28
CHD3-204ENST00000439235 ATP4AP20648 1035 aa23.05■■□□□ 1.28
CHD3-204ENST00000439235 ZSCAN23Q3MJ62 389 aa23.05■■□□□ 1.28
CHD3-204ENST00000439235 XKR9Q5GH70 373 aa23.05■■□□□ 1.28
CHD3-204ENST00000439235 ANO5Q75V66 913 aa23.05■■□□□ 1.28
CHD3-204ENST00000439235 BBXQ8WY36 941 aaPredicted RBP23.05■■□□□ 1.28
CHD3-204ENST00000439235 SMARCE1Q969G3 411 aa23.05■■□□□ 1.28
CHD3-204ENST00000439235 ABHD8Q96I13 439 aa23.05■■□□□ 1.28
CHD3-204ENST00000439235 KIAA1468Q9P260 1216 aa23.05■■□□□ 1.28
CHD3-204ENST00000439235 PPME1Q9Y570 386 aa23.05■■□□□ 1.28
CHD3-204ENST00000439235 MYMKA6NI61 221 aa23.04■■□□□ 1.28
CHD3-204ENST00000439235 ZBTB39O15060 712 aa23.04■■□□□ 1.28
CHD3-204ENST00000439235 KRT18P05783 430 aaKnown RBP23.04■■□□□ 1.28
CHD3-204ENST00000439235 CYP11B2P19099 503 aa23.04■■□□□ 1.28
CHD3-204ENST00000439235 MARK3P27448 753 aa23.04■■□□□ 1.28
CHD3-204ENST00000439235 DPYDQ12882 1025 aa23.04■■□□□ 1.28
CHD3-204ENST00000439235 PLCB4Q15147 1175 aa23.04■■□□□ 1.28
CHD3-204ENST00000439235 PLA2G4FQ68DD2 849 aa23.04■■□□□ 1.28
CHD3-204ENST00000439235 CNNM4Q6P4Q7 775 aa23.04■■□□□ 1.28
CHD3-204ENST00000439235 CEP170P1Q96L14 293 aa23.04■■□□□ 1.28
CHD3-204ENST00000439235 C16orf70Q9BSU1 422 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms