RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 FAM153BP0C7A2 387 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 SRGNP10124 158 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 MRPS35P82673 323 aaKnown RBP17.15■□□□□ 0.34
DHFR-201ENST00000439211 FAM153CQ494X1 144 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 ERICH1Q86X53 443 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 RETREG2Q8NC44 543 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 LARP4BQ92615 738 aaKnown RBP17.15■□□□□ 0.34
DHFR-201ENST00000439211 ZNF570Q96NI8 536 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 VCX3BQ9H321 246 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 VCX3AQ9NNX9 186 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 FAM153AQ9UHL3 310 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 SNX12Q9UMY4 172 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 SPEF2Q9C093 1822 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 ZSCAN5CA6NGD5 496 aaPredicted RBP17.15■□□□□ 0.34
DHFR-201ENST00000439211 RHOBTB3O94955 611 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 GCLCP48506 637 aaPredicted RBP17.15■□□□□ 0.34
DHFR-201ENST00000439211 RAD23BP54727 409 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 KLC1Q07866 573 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 NPY5RQ15761 445 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 IFI16Q16666 785 aaKnown RBP17.15■□□□□ 0.34
DHFR-201ENST00000439211 SPICE1Q8N0Z3 855 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 MMGT1Q8N4V1 131 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 KDM4CQ9H3R0 1056 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 ATP6V1G1O75348 118 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 ADCY7P51828 1080 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 POLR2FP61218 127 aaKnown RBP17.15■□□□□ 0.34
DHFR-201ENST00000439211 GALNT17Q6IS24 598 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 FBXO33Q7Z6M2 555 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 TNFRSF25Q93038 417 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 BICD1Q96G01 975 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 RBM41Q96IZ5 413 aaKnown RBP17.15■□□□□ 0.34
DHFR-201ENST00000439211 ECT2Q9H8V3 914 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 SIPA1L3O60292 1781 aaPredicted RBP17.15■□□□□ 0.34
DHFR-201ENST00000439211 IGF2BP3O00425 579 aaKnown RBP eCLIP17.15■□□□□ 0.34
DHFR-201ENST00000439211 PPP1R2P41236 205 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 GRM4Q14833 912 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 SEPT2Q15019 361 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 SLC9C1Q4G0N8 1177 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 PPP1R15BQ5SWA1 713 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 MAIP1Q8WWC4 291 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 AK8Q96MA6 479 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 TRIM31Q9BZY9 425 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 TRIM7Q9C029 511 aa17.15■□□□□ 0.34
DHFR-201ENST00000439211 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.15■□□□□ 0.342e-8■■■□□ 17.8
DHFR-201ENST00000439211 LAD1O00515 517 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 ALDH3A1P30838 453 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 TTI2Q6NXR4 508 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 CLEC4GQ6UXB4 293 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 IRF2BP1Q8IU81 584 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 MDM1Q8TC05 714 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 DDX23Q9BUQ8 820 aaKnown RBP17.14■□□□□ 0.33
DHFR-201ENST00000439211 CCSER1Q9C0I3 900 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 EBF2Q9HAK2 575 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 SH3GLB2Q9NR46 395 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 IL17RBQ9NRM6 502 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 REXO2Q9Y3B8 237 aaKnown RBP17.14■□□□□ 0.33
DHFR-201ENST00000439211 PHRF1Q9P1Y6 1649 aaKnown RBP17.14■□□□□ 0.33
DHFR-201ENST00000439211 LRRC53A6NM62 1247 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 SF3B3Q15393 1217 aaKnown RBP17.14■□□□□ 0.33
DHFR-201ENST00000439211 VWA3BQ502W6 1294 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 MFSD14BQ5SR56 506 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 TEX9Q8N6V9 391 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 WHAMMQ8TF30 809 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 LZTS2Q9BRK4 669 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 RBM12Q9NTZ6 932 aaKnown RBP17.14■□□□□ 0.33
DHFR-201ENST00000439211 MYL1P05976 194 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 CDK8P49336 464 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 GFPT1Q06210 699 aaPredicted RBP17.14■□□□□ 0.33
DHFR-201ENST00000439211 NAALADL2Q58DX5 795 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 CCDC155Q8N6L0 562 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 MGARPQ8TDB4 240 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 DTNBP1Q96EV8 351 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 CUEDC2Q9H467 287 aa17.14■□□□□ 0.33
DHFR-201ENST00000439211 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.14■□□□□ 0.336e-15■□□□□ 11.3
DHFR-201ENST00000439211 PDS5AQ29RF7 1337 aaKnown RBP17.13■□□□□ 0.33
DHFR-201ENST00000439211 RNF8O76064 485 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 FTCDO95954 541 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 SDCCAG8Q86SQ7 713 aaPredicted RBP17.13■□□□□ 0.33
DHFR-201ENST00000439211 GJA10Q969M2 543 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 CCNL1Q9UK58 526 aaPredicted RBP17.13■□□□□ 0.33
DHFR-201ENST00000439211 MMEP08473 750 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 LINGO3P0C6S8 592 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 UBE2SQ16763 222 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 DCAF17Q5H9S7 520 aaPredicted RBP17.13■□□□□ 0.33
DHFR-201ENST00000439211 TMC4Q7Z404 712 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 MYOCDQ8IZQ8 938 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 LSM14BQ9BX40 385 aaKnown RBP17.13■□□□□ 0.33
DHFR-201ENST00000439211 USP17L5A8MUK1 530 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 TRAPPC3O43617 180 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 NQO1P15559 274 aaKnown RBP17.13■□□□□ 0.33
DHFR-201ENST00000439211 SLC16A2P36021 539 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 PRPF4BQ13523 1007 aaKnown RBP17.13■□□□□ 0.33
DHFR-201ENST00000439211 MAN2A1Q16706 1144 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 TRPM8Q7Z2W7 1104 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 ZNF384Q8TF68 577 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 MS4A14Q96JA4 679 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 DNAJC7Q99615 494 aa17.13■□□□□ 0.33
DHFR-201ENST00000439211 INTS9Q9NV88 658 aaKnown RBP17.13■□□□□ 0.33
DHFR-201ENST00000439211 RCCD1A6NED2 376 aa17.12■□□□□ 0.33
DHFR-201ENST00000439211 TDP2O95551 362 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms