RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 RBM28Q9NW13 759 aaKnown RBP7.79□□□□□ -1.16
ERCC8-203ENST00000439176 ERAP1Q9NZ08 941 aa7.79□□□□□ -1.16
ERCC8-203ENST00000439176 MTUS1Q9ULD2 1270 aa7.79□□□□□ -1.16
ERCC8-203ENST00000439176 TET1Q8NFU7 2136 aa7.79□□□□□ -1.16
ERCC8-203ENST00000439176 PRRC2BQ5JSZ5 2229 aaKnown RBP7.78□□□□□ -1.16
ERCC8-203ENST00000439176 LCHNA4D1U4 455 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 LINC01553A4QN01 128 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 EPOPA6NHQ4 379 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 M0QZ92 97 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 SH2B2O14492 632 aaPredicted RBP7.78□□□□□ -1.16
ERCC8-203ENST00000439176 MEIS2O14770 477 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 SLC27A2O14975 620 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 CTSHP09668 335 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 HOXC8P31273 242 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 TCF7P36402 384 aaPredicted RBP7.78□□□□□ -1.16
ERCC8-203ENST00000439176 FGD1P98174 961 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 MBTPS1Q14703 1052 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 CREB3L3Q68CJ9 461 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 BLOC1S3Q6QNY0 202 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.78□□□□□ -1.16
ERCC8-203ENST00000439176 HEATR3Q7Z4Q2 680 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 TMCO2Q7Z6W1 182 aaPredicted RBP7.78□□□□□ -1.16
ERCC8-203ENST00000439176 CCDC82Q8N4S0 544 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 SRBD1Q8N5C6 995 aaKnown RBP7.78□□□□□ -1.16
ERCC8-203ENST00000439176 LMBR1Q8WVP7 490 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 TOP1MTQ969P6 601 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 ESYT1Q9BSJ8 1104 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 IFIH1Q9BYX4 1025 aaKnown RBP7.78□□□□□ -1.16
ERCC8-203ENST00000439176 GLT8D2Q9H1C3 349 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 SMARCAD1Q9H4L7 1026 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 AZI2Q9H6S1 392 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 SUGCTQ9HAC7 445 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 TAF6LQ9Y6J9 622 aa7.78□□□□□ -1.16
ERCC8-203ENST00000439176 RRN3P2A6NIE6 340 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 hCG_1984214I3L0E3 225 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 LPXNO60711 386 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 UPP2O95045 317 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 PLEKHA8P1O95397 391 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 FOSP01100 380 aaPredicted RBP7.77□□□□□ -1.17
ERCC8-203ENST00000439176 HMGB1P09429 215 aaKnown RBP7.77□□□□□ -1.17
ERCC8-203ENST00000439176 RXRAP19793 462 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 SSTR3P32745 418 aaPredicted RBP7.77□□□□□ -1.17
ERCC8-203ENST00000439176 KCNQ1P51787 676 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 NAPAP54920 295 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 HTRA4P83105 476 aaPredicted RBP7.77□□□□□ -1.17
ERCC8-203ENST00000439176 PPFIA1Q13136 1202 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 KRT32Q14532 448 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 NECTIN1Q15223 517 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 PKDCCQ504Y2 493 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 LCE2AQ5TA79 106 aaPredicted RBP7.77□□□□□ -1.17
ERCC8-203ENST00000439176 IER5Q5VY09 327 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 KRT40Q6A162 431 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 TMTC3Q6ZXV5 915 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 RPAINQ86UA6 219 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 SGMS1Q86VZ5 419 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 MICU3Q86XE3 530 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 TRIM50Q86XT4 487 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 SCUBE3Q8IX30 993 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 PARP9Q8IXQ6 854 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 CMTR1Q8N1G2 835 aaKnown RBP7.77□□□□□ -1.17
ERCC8-203ENST00000439176 ZNF713Q8N859 430 aaPredicted RBP7.77□□□□□ -1.17
ERCC8-203ENST00000439176 RDH13Q8NBN7 331 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 GDPD5Q8WTR4 605 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 WNT8BQ93098 351 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 NEK1Q96PY6 1258 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 SDF4Q9BRK5 362 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 LSG1Q9H089 658 aaKnown RBP7.77□□□□□ -1.17
ERCC8-203ENST00000439176 JPH1Q9HDC5 661 aaPredicted RBP7.77□□□□□ -1.17
ERCC8-203ENST00000439176 JADE2Q9NQC1 790 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 TUBE1Q9UJT0 475 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 PCDHA6Q9UN73 950 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 RWDD3Q9Y3V2 267 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 PCDHA8Q9Y5H6 950 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 CHD9Q3L8U1 2897 aa7.77□□□□□ -1.17
ERCC8-203ENST00000439176 NCOR1O75376 2440 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 LOC100996750A0A140TA64 210 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 CCDC196A0A1B0GTZ2 297 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 ZBTB43O43298 467 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 NCK2O43639 380 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 ARHGEF15O94989 841 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 KCNA2P16389 499 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 ITGB5P18084 799 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 MARK3P27448 753 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 ZNF76P36508 570 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 FUT2Q10981 343 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 SEMA3FQ13275 785 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 GRIK4Q16099 956 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 RTN1Q16799 776 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 PUS10Q3MIT2 529 aaKnown RBP7.76□□□□□ -1.17
ERCC8-203ENST00000439176 EPC2Q52LR7 807 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 TIGD5Q53EQ6 642 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 BMP2KLQ5H9B9 411 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 FAM26DQ5JW98 314 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 FAM43BQ6ZT52 329 aaPredicted RBP7.76□□□□□ -1.17
ERCC8-203ENST00000439176 CENPQQ7L2Z9 268 aaPredicted RBP7.76□□□□□ -1.17
ERCC8-203ENST00000439176 DHX32Q7L7V1 743 aaKnown RBP7.76□□□□□ -1.17
ERCC8-203ENST00000439176 FIBCD1Q8N539 461 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 MRPL38Q96DV4 380 aaKnown RBP7.76□□□□□ -1.17
ERCC8-203ENST00000439176 IL17RAQ96F46 866 aa7.76□□□□□ -1.17
ERCC8-203ENST00000439176 KRTAP4-6Q9BYQ5 205 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms