RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 TREHO43280 583 aa18.14■□□□□ 0.49
SNRPB-202ENST00000438552 ITGB8P26012 769 aa18.14■□□□□ 0.49
SNRPB-202ENST00000438552 PRPHP41219 470 aa18.14■□□□□ 0.49
SNRPB-202ENST00000438552 FXR2P51116 673 aaKnown RBP eCLIP18.14■□□□□ 0.49
SNRPB-202ENST00000438552 ADAM17P78536 824 aa18.14■□□□□ 0.49
SNRPB-202ENST00000438552 IL17AQ16552 155 aa18.14■□□□□ 0.49
SNRPB-202ENST00000438552 WNT8BQ93098 351 aa18.14■□□□□ 0.49
SNRPB-202ENST00000438552 FAM167AQ96KS9 214 aa18.14■□□□□ 0.49
SNRPB-202ENST00000438552 EIF2AK1Q9BQI3 630 aaKnown RBP18.14■□□□□ 0.49
SNRPB-202ENST00000438552 LXNQ9BS40 222 aa18.14■□□□□ 0.49
SNRPB-202ENST00000438552 NOC4LQ9BVI4 516 aaKnown RBP18.14■□□□□ 0.49
SNRPB-202ENST00000438552 HIPK3Q9H422 1215 aa18.14■□□□□ 0.49
SNRPB-202ENST00000438552 NRCAMQ92823 1304 aa18.14■□□□□ 0.49
SNRPB-202ENST00000438552 EVPLQ92817 2033 aa18.13■□□□□ 0.49
SNRPB-202ENST00000438552 TMEM150BA6NC51 233 aa18.13■□□□□ 0.49
SNRPB-202ENST00000438552 HBP1O60381 514 aa18.13■□□□□ 0.49
SNRPB-202ENST00000438552 P4HBP07237 508 aaKnown RBP18.13■□□□□ 0.49
SNRPB-202ENST00000438552 GNAT1P11488 350 aa18.13■□□□□ 0.49
SNRPB-202ENST00000438552 PDIA4P13667 645 aaKnown RBP18.13■□□□□ 0.49
SNRPB-202ENST00000438552 QARSP47897 775 aaKnown RBP18.13■□□□□ 0.49
SNRPB-202ENST00000438552 PSMC5P62195 406 aa18.13■□□□□ 0.49
SNRPB-202ENST00000438552 CEBPZQ03701 1054 aaKnown RBP18.13■□□□□ 0.49
SNRPB-202ENST00000438552 CTTNQ14247 550 aaKnown RBP18.13■□□□□ 0.49
SNRPB-202ENST00000438552 FOXD4L6Q3SYB3 417 aaPredicted RBP18.13■□□□□ 0.49
SNRPB-202ENST00000438552 MARCH8Q5T0T0 291 aa18.13■□□□□ 0.49
SNRPB-202ENST00000438552 FOXD4L3Q6VB84 417 aaPredicted RBP18.13■□□□□ 0.49
SNRPB-202ENST00000438552 RUFY4Q6ZNE9 571 aa18.13■□□□□ 0.49
SNRPB-202ENST00000438552 SERINC5Q86VE9 423 aa18.13■□□□□ 0.49
SNRPB-202ENST00000438552 BBXQ8WY36 941 aaPredicted RBP18.13■□□□□ 0.49
SNRPB-202ENST00000438552 SEPT9Q9UHD8 586 aaPredicted RBP18.13■□□□□ 0.49
SNRPB-202ENST00000438552 TUBE1Q9UJT0 475 aa18.13■□□□□ 0.49
SNRPB-202ENST00000438552 ZDHHC9Q9Y397 364 aa18.13■□□□□ 0.49
SNRPB-202ENST00000438552 COL1A2P08123 1366 aa18.13■□□□□ 0.49
SNRPB-202ENST00000438552 ZBTB42B2RXF5 422 aa18.12■□□□□ 0.49
SNRPB-202ENST00000438552 STBD1O95210 358 aa18.12■□□□□ 0.49
SNRPB-202ENST00000438552 BRD1O95696 1058 aa18.12■□□□□ 0.49
SNRPB-202ENST00000438552 BMP15O95972 392 aa18.12■□□□□ 0.49
SNRPB-202ENST00000438552 RAG1P15918 1043 aa18.12■□□□□ 0.49
SNRPB-202ENST00000438552 CYP2C18P33260 490 aa18.12■□□□□ 0.49
SNRPB-202ENST00000438552 PTK7Q13308 1070 aa18.12■□□□□ 0.49
SNRPB-202ENST00000438552 PLA2G4FQ68DD2 849 aa18.12■□□□□ 0.49
SNRPB-202ENST00000438552 DTHD1Q6ZMT9 781 aa18.12■□□□□ 0.49
SNRPB-202ENST00000438552 NEK9Q8TD19 979 aa18.12■□□□□ 0.49
SNRPB-202ENST00000438552 USP28Q96RU2 1077 aa18.12■□□□□ 0.49
SNRPB-202ENST00000438552 CEP131Q9UPN4 1083 aa18.12■□□□□ 0.49
SNRPB-202ENST00000438552 MBLAC1A4D2B0 266 aaPredicted RBP18.11■□□□□ 0.49
SNRPB-202ENST00000438552 VWA3AA6NCI4 1184 aa18.11■□□□□ 0.49
SNRPB-202ENST00000438552 RRN3P2A6NIE6 340 aa18.11■□□□□ 0.49
SNRPB-202ENST00000438552 PP2D1A8MPX8 630 aa18.11■□□□□ 0.49
SNRPB-202ENST00000438552 MDM2Q00987 491 aaPredicted RBP18.11■□□□□ 0.49
SNRPB-202ENST00000438552 PTPAQ15257 358 aa18.11■□□□□ 0.49
SNRPB-202ENST00000438552 TRIM71Q2Q1W2 868 aaKnown RBP18.11■□□□□ 0.49
SNRPB-202ENST00000438552 XKR3Q5GH77 459 aa18.11■□□□□ 0.49
SNRPB-202ENST00000438552 TPH2Q8IWU9 490 aa18.11■□□□□ 0.49
SNRPB-202ENST00000438552 IGSF22Q8N9C0 903 aa18.11■□□□□ 0.49
SNRPB-202ENST00000438552 TNPO1Q92973 898 aaKnown RBP18.11■□□□□ 0.49
SNRPB-202ENST00000438552 SH2D3AQ9BRG2 576 aa18.11■□□□□ 0.49
SNRPB-202ENST00000438552 WNT8AQ9H1J5 351 aa18.11■□□□□ 0.49
SNRPB-202ENST00000438552 DAXXQ9UER7 740 aaPredicted RBP18.11■□□□□ 0.49
SNRPB-202ENST00000438552 LRWD1Q9UFC0 647 aa18.11■□□□□ 0.49
SNRPB-202ENST00000438552 LOXHD1Q8IVV2 1947 aa18.11■□□□□ 0.49
SNRPB-202ENST00000438552 MED24O75448 989 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 SLITRK3O94933 977 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 C22orf31O95567 290 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 TIMP1P01033 207 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 MAGEA10P43363 369 aaPredicted RBP18.1■□□□□ 0.49
SNRPB-202ENST00000438552 CCL23P55773 120 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 MTERF2Q49AM1 385 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 ZNF484Q5JVG2 852 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 ARL6IP4Q66PJ3 421 aaKnown RBP18.1■□□□□ 0.49
SNRPB-202ENST00000438552 ANO5Q75V66 913 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 CCDC155Q8N6L0 562 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 ERMNQ8TAM6 284 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 BADQ92934 168 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 HSD17B14Q9BPX1 270 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 RAB34Q9BZG1 259 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 ZSWIM4Q9H7M6 989 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 NRBP2Q9NSY0 501 aa18.1■□□□□ 0.49
SNRPB-202ENST00000438552 DDX11L8A8MPP1 907 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 RBAK-RBAKDNI3L0D1 243 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 PITPNM1O00562 1244 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 DKC1O60832 514 aaKnown RBP eCLIP18.09■□□□□ 0.491e-323■■■■□ 21.5
SNRPB-202ENST00000438552 SPATA31C1P0DKV0 1188 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 KLRC1P26715 233 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 DDIT3P35638 169 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 GRIN1Q05586 938 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 BFSP2Q13515 415 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 HAUS3Q68CZ6 603 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 POTEGQ6S5H5 508 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 MTHFD1LQ6UB35 978 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 C4orf19Q8IY42 314 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 CAGE1Q8TC20 777 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 SNX29Q8TEQ0 813 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 SCLYQ96I15 445 aa18.09■□□□□ 0.49
SNRPB-202ENST00000438552 ZNF396Q96N95 335 aaPredicted RBP18.09■□□□□ 0.49
SNRPB-202ENST00000438552 LBHD1Q9BQE6 289 aaPredicted RBP18.09■□□□□ 0.49
SNRPB-202ENST00000438552 FAM49AQ9H0Q0 323 aaPredicted RBP18.09■□□□□ 0.49
SNRPB-202ENST00000438552 TFIP11Q9UBB9 837 aaKnown RBP18.09■□□□□ 0.49
SNRPB-202ENST00000438552 TCHHQ07283 1943 aa18.08■□□□□ 0.49
SNRPB-202ENST00000438552 ZBTB39O15060 712 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms