RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 ZNF484Q5JVG2 852 aa18.35■□□□□ 0.53
SMPD4-207ENST00000435455 CNKSR3Q6P9H4 555 aa18.35■□□□□ 0.53
SMPD4-207ENST00000435455 RUFY4Q6ZNE9 571 aa18.35■□□□□ 0.53
SMPD4-207ENST00000435455 DEFB123Q8N688 67 aa18.35■□□□□ 0.53
SMPD4-207ENST00000435455 FAM167AQ96KS9 214 aa18.35■□□□□ 0.53
SMPD4-207ENST00000435455 UNC45AQ9H3U1 944 aa18.35■□□□□ 0.53
SMPD4-207ENST00000435455 GABBR1Q9UBS5 961 aa18.35■□□□□ 0.53
SMPD4-207ENST00000435455 IGSF9BQ9UPX0 1349 aa18.34■□□□□ 0.53
SMPD4-207ENST00000435455 FAM205CA6NFA0 338 aa18.34■□□□□ 0.53
SMPD4-207ENST00000435455 TBX3O15119 743 aa18.34■□□□□ 0.53
SMPD4-207ENST00000435455 CHMP2AO43633 222 aa18.34■□□□□ 0.53
SMPD4-207ENST00000435455 MBTPS1Q14703 1052 aa18.34■□□□□ 0.53
SMPD4-207ENST00000435455 FAM26DQ5JW98 314 aa18.34■□□□□ 0.53
SMPD4-207ENST00000435455 MIER3Q7Z3K6 550 aa18.34■□□□□ 0.53
SMPD4-207ENST00000435455 BBXQ8WY36 941 aaPredicted RBP18.34■□□□□ 0.53
SMPD4-207ENST00000435455 KCNMB3Q9NPA1 279 aa18.34■□□□□ 0.53
SMPD4-207ENST00000435455 TMEM265A0A087WTH1 108 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 MARCH6O60337 910 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 EFCAB14O75071 495 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 BAG4O95429 457 aaKnown RBP18.33■□□□□ 0.52
SMPD4-207ENST00000435455 CTSHP09668 335 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 DNAJB2P25686 324 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 GUCY1B3Q02153 619 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 ZNF697Q5TEC3 545 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 B3GNT9Q6UX72 402 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 FBXO18Q8NFZ0 1043 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 TRAPPC12Q8WVT3 735 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 GJA10Q969M2 543 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 TMX3Q96JJ7 454 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 PCDHA2Q9Y5H9 948 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 EVPLQ92817 2033 aa18.33■□□□□ 0.52
SMPD4-207ENST00000435455 ATP2A2P16615 1042 aaKnown RBP18.32■□□□□ 0.52
SMPD4-207ENST00000435455 ATP4AP20648 1035 aa18.32■□□□□ 0.52
SMPD4-207ENST00000435455 KCNJ6P48051 423 aa18.32■□□□□ 0.52
SMPD4-207ENST00000435455 IKBKEQ14164 716 aa18.32■□□□□ 0.52
SMPD4-207ENST00000435455 RAB30Q15771 203 aa18.32■□□□□ 0.52
SMPD4-207ENST00000435455 MTHFD1LQ6UB35 978 aa18.32■□□□□ 0.52
SMPD4-207ENST00000435455 Q7L0L9 218 aa18.32■□□□□ 0.52
SMPD4-207ENST00000435455 DNAJB3Q8WWF6 145 aa18.32■□□□□ 0.52
SMPD4-207ENST00000435455 SLC9A7Q96T83 725 aa18.32■□□□□ 0.52
SMPD4-207ENST00000435455 FOXP1Q9H334 677 aaPredicted RBP18.32■□□□□ 0.52
SMPD4-207ENST00000435455 NRBP2Q9NSY0 501 aa18.32■□□□□ 0.52
SMPD4-207ENST00000435455 MSRAQ9UJ68 235 aa18.32■□□□□ 0.52
SMPD4-207ENST00000435455 GBF1Q92538 1859 aa18.32■□□□□ 0.52
SMPD4-207ENST00000435455 SMIM35A0A1B0GVV1 85 aa18.31■□□□□ 0.52
SMPD4-207ENST00000435455 ABHD14A-ACY1A0A1B0GW23 586 aa18.31■□□□□ 0.52
SMPD4-207ENST00000435455 GRXCR1A8MXD5 290 aa18.31■□□□□ 0.52
SMPD4-207ENST00000435455 CD2BP2O95400 341 aaKnown RBP18.31■□□□□ 0.52
SMPD4-207ENST00000435455 KLRC1P26715 233 aa18.31■□□□□ 0.52
SMPD4-207ENST00000435455 PPP2R5CQ13362 524 aa18.31■□□□□ 0.52
SMPD4-207ENST00000435455 GNL2Q13823 731 aaKnown RBP18.31■□□□□ 0.52
SMPD4-207ENST00000435455 PLEKHG4Q58EX7 1191 aa18.31■□□□□ 0.52
SMPD4-207ENST00000435455 POTEDQ86YR6 584 aa18.31■□□□□ 0.52
SMPD4-207ENST00000435455 SLFN12Q8IYM2 578 aa18.31■□□□□ 0.52
SMPD4-207ENST00000435455 PHOSPHO2Q8TCD6 241 aa18.31■□□□□ 0.52
SMPD4-207ENST00000435455 CEP131Q9UPN4 1083 aa18.31■□□□□ 0.52
SMPD4-207ENST00000435455 MICAL3Q7RTP6 2002 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 ZBTB42B2RXF5 422 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 M0QZ92 97 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 ZNF862O60290 1169 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 CHRNA1P02708 482 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 OATP04181 439 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 WDR5P61964 334 aaKnown RBP18.3■□□□□ 0.52
SMPD4-207ENST00000435455 MRPS6P82932 125 aaKnown RBP18.3■□□□□ 0.52
SMPD4-207ENST00000435455 PRKCEQ02156 737 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 IER5Q5VY09 327 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 NME8Q8N427 588 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 DBF4BQ8NFT6 615 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 SEPT8Q92599 483 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 HAS1Q92839 578 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 TIFAQ96CG3 184 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 PBX4Q9BYU1 374 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 FAM49AQ9H0Q0 323 aaPredicted RBP18.3■□□□□ 0.52
SMPD4-207ENST00000435455 MTMR10Q9NXD2 777 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 VAV3Q9UKW4 847 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 SIP14410 1827 aa18.3■□□□□ 0.52
SMPD4-207ENST00000435455 NEMFO60524 1076 aa18.29■□□□□ 0.52
SMPD4-207ENST00000435455 MGAT3Q09327 533 aa18.29■□□□□ 0.52
SMPD4-207ENST00000435455 CALCRLQ16602 461 aa18.29■□□□□ 0.52
SMPD4-207ENST00000435455 UGCGQ16739 394 aa18.29■□□□□ 0.52
SMPD4-207ENST00000435455 APBB2Q92870 758 aa18.29■□□□□ 0.52
SMPD4-207ENST00000435455 ZBTB10Q96DT7 871 aa18.29■□□□□ 0.52
SMPD4-207ENST00000435455 PCDHA11Q9Y5I1 949 aa18.29■□□□□ 0.52
SMPD4-207ENST00000435455 CDY2AQ9Y6F7 541 aa18.29■□□□□ 0.52
SMPD4-207ENST00000435455 CHD9Q3L8U1 2897 aa18.29■□□□□ 0.52
SMPD4-207ENST00000435455 PTPRSQ13332 1948 aa18.28■□□□□ 0.52
SMPD4-207ENST00000435455 LOXHD1Q8IVV2 1947 aa18.28■□□□□ 0.52
SMPD4-207ENST00000435455 MAGEB2O15479 319 aa18.28■□□□□ 0.52
SMPD4-207ENST00000435455 DKC1O60832 514 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMPD4-207ENST00000435455 C22orf31O95567 290 aa18.28■□□□□ 0.52
SMPD4-207ENST00000435455 PBX2P40425 430 aa18.28■□□□□ 0.52
SMPD4-207ENST00000435455 ORC2Q13416 577 aaPredicted RBP18.28■□□□□ 0.52
SMPD4-207ENST00000435455 XKR3Q5GH77 459 aa18.28■□□□□ 0.52
SMPD4-207ENST00000435455 TRMT1LQ7Z2T5 733 aaKnown RBP18.28■□□□□ 0.52
SMPD4-207ENST00000435455 NOSTRINQ8IVI9 506 aa18.28■□□□□ 0.52
SMPD4-207ENST00000435455 SEMA6BQ9H3T3 888 aa18.28■□□□□ 0.52
SMPD4-207ENST00000435455 TRPV2Q9Y5S1 764 aa18.28■□□□□ 0.52
SMPD4-207ENST00000435455 SQORQ9Y6N5 450 aa18.28■□□□□ 0.52
SMPD4-207ENST00000435455 MYO9BQ13459 2157 aa18.28■□□□□ 0.52
SMPD4-207ENST00000435455 KIF28PB7ZC32 967 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms