RNA–Protein interactions for RNA: ENST00000435327.2

CCDC13-202, Transcript of coiled-coil domain containing 13, humanhuman

TSL 2

Gene CCDC13, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-202ENST00000435327 NACC1Q96RE7 527 aa18.58■□□□□ 0.56
CCDC13-202ENST00000435327 CUEDC2Q9H467 287 aa18.58■□□□□ 0.56
CCDC13-202ENST00000435327 SMARCAD1Q9H4L7 1026 aa18.58■□□□□ 0.56
CCDC13-202ENST00000435327 DNM3Q9UQ16 869 aa18.58■□□□□ 0.56
CCDC13-202ENST00000435327 MAFBQ9Y5Q3 323 aaPredicted RBP18.58■□□□□ 0.56
CCDC13-202ENST00000435327 MYADML2A6NDP7 307 aa18.57■□□□□ 0.56
CCDC13-202ENST00000435327 ACTN4O43707 911 aaKnown RBP18.57■□□□□ 0.56
CCDC13-202ENST00000435327 ZNF862O60290 1169 aa18.57■□□□□ 0.56
CCDC13-202ENST00000435327 TRAK2O60296 914 aa18.57■□□□□ 0.56
CCDC13-202ENST00000435327 LYPLA2O95372 231 aa18.57■□□□□ 0.56
CCDC13-202ENST00000435327 SSBP05455 408 aaKnown RBP eCLIP18.57■□□□□ 0.56
CCDC13-202ENST00000435327 MYL3P08590 195 aa18.57■□□□□ 0.56
CCDC13-202ENST00000435327 HOXD8P13378 290 aaPredicted RBP18.57■□□□□ 0.56
CCDC13-202ENST00000435327 CCL5P13501 91 aa18.57■□□□□ 0.56
CCDC13-202ENST00000435327 PSMC6P62333 389 aa18.57■□□□□ 0.56
CCDC13-202ENST00000435327 DHX8Q14562 1220 aaKnown RBP18.57■□□□□ 0.56
CCDC13-202ENST00000435327 MTFR1Q15390 333 aa18.57■□□□□ 0.56
CCDC13-202ENST00000435327 KLHL40Q2TBA0 621 aa18.57■□□□□ 0.56
CCDC13-202ENST00000435327 KCTD17Q8N5Z5 321 aa18.57■□□□□ 0.56
CCDC13-202ENST00000435327 PIGOQ8TEQ8 1089 aa18.57■□□□□ 0.56
CCDC13-202ENST00000435327 LARP4BQ92615 738 aaKnown RBP18.57■□□□□ 0.56
CCDC13-202ENST00000435327 CCDC43Q96MW1 224 aaKnown RBP18.57■□□□□ 0.56
CCDC13-202ENST00000435327 TIGD1Q96MW7 591 aa18.57■□□□□ 0.56
CCDC13-202ENST00000435327 BLOC1S4Q9NUP1 217 aa18.57■□□□□ 0.56
CCDC13-202ENST00000435327 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.56■□□□□ 0.56
CCDC13-202ENST00000435327 CTAGE5O15320 804 aa18.56■□□□□ 0.56
CCDC13-202ENST00000435327 ZEB2O60315 1214 aa18.56■□□□□ 0.56
CCDC13-202ENST00000435327 ADAMTS4O75173 837 aa18.56■□□□□ 0.56
CCDC13-202ENST00000435327 EYA4O95677 639 aa18.56■□□□□ 0.56
CCDC13-202ENST00000435327 OATP04181 439 aa18.56■□□□□ 0.56
CCDC13-202ENST00000435327 SLFN14P0C7P3 912 aa18.56■□□□□ 0.56
CCDC13-202ENST00000435327 MARK3P27448 753 aa18.56■□□□□ 0.56
CCDC13-202ENST00000435327 MCM6Q14566 821 aa18.56■□□□□ 0.56
CCDC13-202ENST00000435327 GNASQ5JWF2 1037 aa18.56■□□□□ 0.56
CCDC13-202ENST00000435327 PLPPR4Q7Z2D5 763 aa18.56■□□□□ 0.56
CCDC13-202ENST00000435327 CCDC34Q96HJ3 373 aa18.56■□□□□ 0.56
CCDC13-202ENST00000435327 SEPT9Q9UHD8 586 aaPredicted RBP18.56■□□□□ 0.56
CCDC13-202ENST00000435327 ZNF215Q9UL58 517 aaPredicted RBP18.56■□□□□ 0.56
CCDC13-202ENST00000435327 ZBTB39O15060 712 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 PLA2G4BP0C869 781 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 ATP4AP20648 1035 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 YWHABP31946 246 aaKnown RBP18.55■□□□□ 0.56
CCDC13-202ENST00000435327 AFMP43652 599 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 SLC26A2P50443 739 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 NKX3-2P78367 333 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 XKR3Q5GH77 459 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 KANK3Q6NY19 840 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 CAVIN1Q6NZI2 390 aaKnown RBP18.55■□□□□ 0.56
CCDC13-202ENST00000435327 SV2BQ7L1I2 683 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 OTUD6AQ7L8S5 288 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 STAMQ92783 540 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 FAM167AQ96KS9 214 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 C16orf70Q9BSU1 422 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 RNF208Q9H0X6 261 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 NUP62CLQ9H1M0 184 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 MAGEF1Q9HAY2 307 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 NRBP2Q9NSY0 501 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 ERAP1Q9NZ08 941 aa18.55■□□□□ 0.56
CCDC13-202ENST00000435327 ARHGEF35A5YM69 484 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 TMEM150BA6NC51 233 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 KPNA6O60684 536 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 STBD1O95210 358 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 XRCC6P12956 609 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCDC13-202ENST00000435327 PLCB4Q15147 1175 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 XKR9Q5GH70 373 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 PLA2G4FQ68DD2 849 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 LHX8Q68G74 356 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 RNF180Q86T96 592 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 GRAMD1CQ8IYS0 662 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 KLHDC9Q8NEP7 349 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 SYAP1Q96A49 352 aaPredicted RBP18.54■□□□□ 0.56
CCDC13-202ENST00000435327 ARMC5Q96C12 935 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 BHMT2Q9H2M3 363 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 CLSTN2Q9H4D0 955 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 PAK6Q9NQU5 681 aaPredicted RBP18.54■□□□□ 0.56
CCDC13-202ENST00000435327 ANKEF1Q9NU02 776 aa18.54■□□□□ 0.56
CCDC13-202ENST00000435327 DBR1Q9UK59 544 aaKnown RBP18.54■□□□□ 0.56
CCDC13-202ENST00000435327 H3BRB1 525 aa18.53■□□□□ 0.56
CCDC13-202ENST00000435327 CST5P28325 142 aaPredicted RBP18.53■□□□□ 0.56
CCDC13-202ENST00000435327 CHMP4BP1P59074 171 aa18.53■□□□□ 0.56
CCDC13-202ENST00000435327 CAMK4Q16566 473 aa18.53■□□□□ 0.56
CCDC13-202ENST00000435327 ANO5Q75V66 913 aa18.53■□□□□ 0.56
CCDC13-202ENST00000435327 SYT2Q8N9I0 419 aaPredicted RBP18.53■□□□□ 0.56
CCDC13-202ENST00000435327 PCSK9Q8NBP7 692 aaKnown RBP18.53■□□□□ 0.56
CCDC13-202ENST00000435327 ATP8B4Q8TF62 1192 aa18.53■□□□□ 0.56
CCDC13-202ENST00000435327 BBXQ8WY36 941 aaPredicted RBP18.53■□□□□ 0.56
CCDC13-202ENST00000435327 PAGE5Q96GU1 130 aa18.53■□□□□ 0.56
CCDC13-202ENST00000435327 ZNF333Q96JL9 665 aa18.53■□□□□ 0.56
CCDC13-202ENST00000435327 DEFB118Q96PH6 123 aa18.53■□□□□ 0.56
CCDC13-202ENST00000435327 TNMDQ9H2S6 317 aa18.53■□□□□ 0.56
CCDC13-202ENST00000435327 TUT1Q9H6E5 874 aaKnown RBP18.53■□□□□ 0.56
CCDC13-202ENST00000435327 HOOK1Q9UJC3 728 aaKnown RBP18.53■□□□□ 0.56
CCDC13-202ENST00000435327 TRPC6Q9Y210 931 aa18.53■□□□□ 0.56
CCDC13-202ENST00000435327 KAT6AQ92794 2004 aa18.52■□□□□ 0.56
CCDC13-202ENST00000435327 HBP1O60381 514 aa18.52■□□□□ 0.56
CCDC13-202ENST00000435327 F2P00734 622 aa18.52■□□□□ 0.56
CCDC13-202ENST00000435327 RARRES1P49788 294 aa18.52■□□□□ 0.56
CCDC13-202ENST00000435327 PSEN2P49810 448 aa18.52■□□□□ 0.56
CCDC13-202ENST00000435327 SLC12A3P55017 1021 aa18.52■□□□□ 0.56
CCDC13-202ENST00000435327 NPEPPSP55786 919 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms