RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 ZNF536O15090 1300 aa18.4■□□□□ 0.54
LIMK1-203ENST00000435201 RPTORQ8N122 1335 aa18.4■□□□□ 0.54
LIMK1-203ENST00000435201 PJA2O43164 708 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 TACC1O75410 805 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 AFPP02771 609 aaKnown RBP18.39■□□□□ 0.54
LIMK1-203ENST00000435201 NR3C1P04150 777 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 ARP10275 920 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 HGSNATQ68CP4 663 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 NIPA1Q7RTP0 329 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 UBE2Q2Q8WVN8 375 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 HOOK2Q96ED9 719 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 AGBL1Q96MI9 1066 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 UNC45AQ9H3U1 944 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 ANKZF1Q9H8Y5 726 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 PARVGQ9HBI0 331 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 NLRC4Q9NPP4 1024 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 LUC7LQ9NQ29 371 aaKnown RBP18.39■□□□□ 0.54
LIMK1-203ENST00000435201 RAB21Q9UL25 225 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 ODF2LQ9ULJ1 636 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 ASTN1O14525 1302 aa18.39■□□□□ 0.54
LIMK1-203ENST00000435201 MACROD2A1Z1Q3 448 aa18.39■□□□□ 0.53
LIMK1-203ENST00000435201 RBAK-RBAKDNI3L0D1 243 aa18.39■□□□□ 0.53
LIMK1-203ENST00000435201 IPO5O00410 1097 aaKnown RBP18.39■□□□□ 0.53
LIMK1-203ENST00000435201 ENC1O14682 589 aa18.39■□□□□ 0.53
LIMK1-203ENST00000435201 EPB41P11171 864 aaKnown RBP18.39■□□□□ 0.53
LIMK1-203ENST00000435201 XRCC5P13010 732 aaKnown RBP18.39■□□□□ 0.53
LIMK1-203ENST00000435201 MAGEA1P43355 309 aa18.39■□□□□ 0.53
LIMK1-203ENST00000435201 POLR2FP61218 127 aaKnown RBP18.39■□□□□ 0.53
LIMK1-203ENST00000435201 NFIL3Q16649 462 aa18.39■□□□□ 0.53
LIMK1-203ENST00000435201 TDRD12Q587J7 1177 aaKnown RBP18.39■□□□□ 0.53
LIMK1-203ENST00000435201 STXBP4Q6ZWJ1 553 aa18.39■□□□□ 0.53
LIMK1-203ENST00000435201 SAMD3Q8N6K7 520 aa18.39■□□□□ 0.53
LIMK1-203ENST00000435201 TEPSINQ96N21 525 aa18.39■□□□□ 0.53
LIMK1-203ENST00000435201 MAP3K20Q9NYL2 800 aaKnown RBP18.39■□□□□ 0.53
LIMK1-203ENST00000435201 PNMA2Q9UL42 364 aa18.39■□□□□ 0.53
LIMK1-203ENST00000435201 MYCT1Q8N699 235 aa18.38■□□□□ 0.53
LIMK1-203ENST00000435201 HNRNPLLQ8WVV9 542 aaKnown RBP18.38■□□□□ 0.53
LIMK1-203ENST00000435201 ALS2CR12Q96Q35 445 aa18.38■□□□□ 0.53
LIMK1-203ENST00000435201 GANQ9H2C0 597 aa18.38■□□□□ 0.53
LIMK1-203ENST00000435201 PLCB1Q9NQ66 1216 aa18.38■□□□□ 0.53
LIMK1-203ENST00000435201 HDAC6Q9UBN7 1215 aa18.38■□□□□ 0.53
LIMK1-203ENST00000435201 JRKLQ9Y4A0 524 aa18.38■□□□□ 0.53
LIMK1-203ENST00000435201 SHTN1A0MZ66 631 aa18.37■□□□□ 0.53
LIMK1-203ENST00000435201 CTNND1O60716 968 aaKnown RBP18.37■□□□□ 0.53
LIMK1-203ENST00000435201 ZNF131P52739 623 aa18.37■□□□□ 0.53
LIMK1-203ENST00000435201 SLC30A10Q6XR72 485 aa18.37■□□□□ 0.53
LIMK1-203ENST00000435201 CLEC4DQ8WXI8 215 aa18.37■□□□□ 0.53
LIMK1-203ENST00000435201 CRACR2AQ9BSW2 395 aa18.37■□□□□ 0.53
LIMK1-203ENST00000435201 AIPL1Q9NZN9 384 aa18.37■□□□□ 0.53
LIMK1-203ENST00000435201 DUSP10Q9Y6W6 482 aa18.37■□□□□ 0.53
LIMK1-203ENST00000435201 ERLIN1O75477 346 aa18.37■□□□□ 0.53
LIMK1-203ENST00000435201 AKAP3O75969 853 aa18.37■□□□□ 0.53
LIMK1-203ENST00000435201 SEC31AO94979 1220 aaKnown RBP18.37■□□□□ 0.53
LIMK1-203ENST00000435201 GABPB1Q06547 395 aaPredicted RBP18.37■□□□□ 0.53
LIMK1-203ENST00000435201 LXNQ9BS40 222 aa18.37■□□□□ 0.53
LIMK1-203ENST00000435201 SLC38A10Q9HBR0 1119 aa18.37■□□□□ 0.53
LIMK1-203ENST00000435201 TLR2O60603 784 aa18.36■□□□□ 0.53
LIMK1-203ENST00000435201 TFRCP02786 760 aaKnown RBP18.36■□□□□ 0.53
LIMK1-203ENST00000435201 GUCY2CP25092 1073 aa18.36■□□□□ 0.53
LIMK1-203ENST00000435201 POLD1P28340 1107 aa18.36■□□□□ 0.53
LIMK1-203ENST00000435201 RAPGEF1Q13905 1077 aa18.36■□□□□ 0.53
LIMK1-203ENST00000435201 ZMYM2Q9UBW7 1377 aa18.36■□□□□ 0.53
LIMK1-203ENST00000435201 NFIBO00712 420 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 PPP1R12BO60237 982 aaPredicted RBP18.35■□□□□ 0.53
LIMK1-203ENST00000435201 TBC1D8O95759 1140 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 ITGB5P18084 799 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 GFPT1Q06210 699 aaPredicted RBP18.35■□□□□ 0.53
LIMK1-203ENST00000435201 ASIC2Q16515 512 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 PCNX4Q63HM2 1172 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 IQCEQ6IPM2 695 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 RNF10Q8N5U6 811 aaKnown RBP18.35■□□□□ 0.53
LIMK1-203ENST00000435201 GBP3Q9H0R5 595 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 KCNH7Q9NS40 1196 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 COL20A1Q9P218 1284 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 DOCK1Q14185 1865 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 GTPBP10A4D1E9 387 aaKnown RBP18.35■□□□□ 0.53
LIMK1-203ENST00000435201 ARHGEF35A5YM69 484 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 SFI1A8K8P3 1242 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 NFKBIEO00221 500 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 TGFB1I1O43294 461 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 ALAS1P13196 640 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 PRLRP16471 622 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 NMT1P30419 496 aaKnown RBP18.35■□□□□ 0.53
LIMK1-203ENST00000435201 USP14P54578 494 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 EXOC3L4Q17RC7 722 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 DCAF17Q5H9S7 520 aaPredicted RBP18.35■□□□□ 0.53
LIMK1-203ENST00000435201 MIER3Q7Z3K6 550 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 FAM178BQ8IXR5 827 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 PNKPQ96T60 521 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 MKNK1Q9BUB5 465 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 WRAP73Q9P2S5 460 aaPredicted RBP18.35■□□□□ 0.53
LIMK1-203ENST00000435201 FBXL5Q9UKA1 691 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 CAPN6Q9Y6Q1 641 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 MYH11P35749 1972 aa18.35■□□□□ 0.53
LIMK1-203ENST00000435201 RHOXF2BP0C7M4 288 aa18.34■□□□□ 0.53
LIMK1-203ENST00000435201 FDX1P10109 184 aa18.34■□□□□ 0.53
LIMK1-203ENST00000435201 PSMC2P35998 433 aaKnown RBP18.34■□□□□ 0.53
LIMK1-203ENST00000435201 LONRF2Q1L5Z9 754 aa18.34■□□□□ 0.53
LIMK1-203ENST00000435201 GBP6Q6ZN66 633 aa18.34■□□□□ 0.53
LIMK1-203ENST00000435201 HS2ST1Q7LGA3 356 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms