RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 DNAJC9Q8WXX5 260 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 TBC1D7Q9P0N9 293 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 HAO1Q9UJM8 370 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 LTKP29376 864 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 PMS2P54278 862 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 BNIP1Q12981 228 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 TNIP1Q15025 636 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 ZC3H18Q86VM9 953 aaKnown RBP8.09□□□□□ -1.11
CPSF6-202ENST00000435070 SCFD2Q8WU76 684 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 NACAP1Q9BZK3 213 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 NWD1Q149M9 1564 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 ETS2P15036 469 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 HNRNPH3P31942 346 aaKnown RBP8.09□□□□□ -1.11
CPSF6-202ENST00000435070 PEX5P50542 639 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 NPY5RQ15761 445 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 MAN2A1Q16706 1144 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 TSNAXIP1Q2TAA8 658 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 FIGNQ5HY92 759 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 UIMC1Q96RL1 719 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 RHBDL2Q9NX52 303 aa8.09□□□□□ -1.11
CPSF6-202ENST00000435070 RTCBQ9Y3I0 505 aaKnown RBP8.09□□□□□ -1.11
CPSF6-202ENST00000435070 TPP2P29144 1249 aaPredicted RBP8.08□□□□□ -1.12
CPSF6-202ENST00000435070 MMP13P45452 471 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 ASTE1Q2TB18 679 aaPredicted RBP8.08□□□□□ -1.12
CPSF6-202ENST00000435070 MAIP1Q8WWC4 291 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 CEP63Q96MT8 703 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 PYM1Q9BRP8 204 aaKnown RBP8.08□□□□□ -1.12
CPSF6-202ENST00000435070 TRIM7Q9C029 511 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 RNPEPL1Q9HAU8 725 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 ARHGEF3Q9NR81 526 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 CCDC194A0A1B0GVG4 234 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 LIN7AO14910 233 aaPredicted RBP8.08□□□□□ -1.12
CPSF6-202ENST00000435070 CETN3O15182 167 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 NMT2O60551 498 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 GH1P01241 217 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 ZCCHC18P0CG32 403 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 MYBP10242 640 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 ZNF131P52739 623 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 TEX9Q8N6V9 391 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 DTX3LQ8TDB6 740 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.08□□□□□ -1.127e-7■□□□□ 9.9
CPSF6-202ENST00000435070 TRIM9Q9C026 710 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 SLC52A2Q9HAB3 445 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 WDR70Q9NW82 654 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 HEG1Q9ULI3 1381 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 TRAF5O00463 557 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 GM2AP17900 193 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 CALB2P22676 271 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 PTDSS1P48651 473 aaKnown RBP8.08□□□□□ -1.12
CPSF6-202ENST00000435070 LONRF1Q17RB8 773 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 APBB1IPQ7Z5R6 666 aaPredicted RBP8.08□□□□□ -1.12
CPSF6-202ENST00000435070 TMTC2Q8N394 836 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 KIAA0895Q8NCT3 520 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 UTP4Q969X6 686 aaKnown RBP8.08□□□□□ -1.12
CPSF6-202ENST00000435070 VCXQ9H320 206 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 TBK1Q9UHD2 729 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 INTUQ9ULD6 942 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 NBPF26B4DH59 902 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 SMAPO00193 183 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 LONP1P36776 959 aaKnown RBP8.08□□□□□ -1.12
CPSF6-202ENST00000435070 UBE3CQ15386 1083 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 INTS8Q75QN2 995 aaKnown RBP8.08□□□□□ -1.12
CPSF6-202ENST00000435070 NBPF15Q8N660 670 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 ENAHQ8N8S7 591 aaPredicted RBP8.08□□□□□ -1.12
CPSF6-202ENST00000435070 KIFAP3Q92845 792 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 ANKIB1Q9P2G1 1089 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 KLHL14Q9P2G3 628 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 AKAP12Q02952 1782 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 UBTFL6P0CB48 400 aaPredicted RBP8.08□□□□□ -1.12
CPSF6-202ENST00000435070 KCNMA1Q12791 1236 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 CNGA2Q16280 664 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 LRP10Q7Z4F1 713 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 CABP7Q86V35 215 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 PIGOQ8TEQ8 1089 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.08□□□□□ -1.12
CPSF6-202ENST00000435070 GBP5Q96PP8 586 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 C4AP0C0L4 1744 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 C4BP0C0L5 1744 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 FAM205AQ6ZU69 1335 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 RASGRF2O14827 1237 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 LCA5LO95447 670 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 SERPING1P05155 500 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 ATP6V1C1P21283 382 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 SLC18A3Q16572 532 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 RFX8Q6ZV50 586 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 NELFCDQ8IXH7 590 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 SRBD1Q8N5C6 995 aaKnown RBP8.08□□□□□ -1.12
CPSF6-202ENST00000435070 CENPTQ96BT3 561 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 ERP27Q96DN0 273 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 SCOCQ9UIL1 159 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 DAAM1Q9Y4D1 1078 aa8.08□□□□□ -1.12
CPSF6-202ENST00000435070 MYO5AQ9Y4I1 1855 aaKnown RBP8.07□□□□□ -1.12
CPSF6-202ENST00000435070 SLIT1O75093 1534 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 RIMBP3CA6NJZ7 1639 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 RIMBP3BA6NNM3 1639 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 RIMBP3Q9UFD9 1639 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 TMEM120BA0PK00 339 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 ACSL3O95573 720 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 ACTN1P12814 892 aa8.07□□□□□ -1.12
CPSF6-202ENST00000435070 EPHB2P29323 1055 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms