RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 MYPNQ86TC9 1320 aa21.59■■□□□ 1.05
VRK2-205ENST00000432057 CTIFO43310 598 aaKnown RBP21.59■■□□□ 1.05
VRK2-205ENST00000432057 GNA14O95837 355 aa21.59■■□□□ 1.05
VRK2-205ENST00000432057 P4HBP07237 508 aaKnown RBP21.59■■□□□ 1.05
VRK2-205ENST00000432057 NR2F2P24468 414 aa21.59■■□□□ 1.05
VRK2-205ENST00000432057 NMT1P30419 496 aaKnown RBP21.59■■□□□ 1.05
VRK2-205ENST00000432057 MARSP56192 900 aaKnown RBP21.59■■□□□ 1.05
VRK2-205ENST00000432057 ZBED6P86452 979 aa21.59■■□□□ 1.05
VRK2-205ENST00000432057 CCDC155Q8N6L0 562 aa21.59■■□□□ 1.05
VRK2-205ENST00000432057 ACAD9Q9H845 621 aa21.59■■□□□ 1.05
VRK2-205ENST00000432057 PARVGQ9HBI0 331 aa21.59■■□□□ 1.05
VRK2-205ENST00000432057 CSADQ9Y600 493 aa21.59■■□□□ 1.05
VRK2-205ENST00000432057 ASTN1O14525 1302 aa21.59■■□□□ 1.05
VRK2-205ENST00000432057 ZMYM2Q9UBW7 1377 aa21.58■■□□□ 1.05
VRK2-205ENST00000432057 A0A1W2PQJ5 194 aa21.58■■□□□ 1.05
VRK2-205ENST00000432057 EPHB6O15197 1021 aa21.58■■□□□ 1.05
VRK2-205ENST00000432057 TRIM59Q8IWR1 403 aa21.58■■□□□ 1.05
VRK2-205ENST00000432057 RBM46Q8TBY0 533 aaKnown RBP21.58■■□□□ 1.05
VRK2-205ENST00000432057 SMCR8Q8TEV9 937 aaPredicted RBP21.58■■□□□ 1.05
VRK2-205ENST00000432057 ZSWIM4Q9H7M6 989 aa21.58■■□□□ 1.05
VRK2-205ENST00000432057 LZTFL1Q9NQ48 299 aa21.58■■□□□ 1.05
VRK2-205ENST00000432057 FAM207AQ9NSI2 230 aaPredicted RBP21.58■■□□□ 1.05
VRK2-205ENST00000432057 KCND2Q9NZV8 630 aa21.58■■□□□ 1.05
VRK2-205ENST00000432057 PDXKO00764 312 aa21.58■■□□□ 1.04
VRK2-205ENST00000432057 CETN3O15182 167 aa21.58■■□□□ 1.04
VRK2-205ENST00000432057 CALUO43852 315 aaPredicted RBP21.58■■□□□ 1.04
VRK2-205ENST00000432057 NR3C2P08235 984 aa21.58■■□□□ 1.04
VRK2-205ENST00000432057 KCNA1Q09470 495 aa21.58■■□□□ 1.04
VRK2-205ENST00000432057 TSR1Q2NL82 804 aaKnown RBP21.58■■□□□ 1.04
VRK2-205ENST00000432057 VSIG10LQ86VR7 867 aa21.58■■□□□ 1.04
VRK2-205ENST00000432057 MMRN2Q9H8L6 949 aa21.58■■□□□ 1.04
VRK2-205ENST00000432057 A1CFQ9NQ94 594 aaKnown RBP21.58■■□□□ 1.04
VRK2-205ENST00000432057 TYW1Q9NV66 732 aaKnown RBP21.58■■□□□ 1.04
VRK2-205ENST00000432057 HOXC10Q9NYD6 342 aa21.58■■□□□ 1.04
VRK2-205ENST00000432057 CYP39A1Q9NYL5 469 aa21.58■■□□□ 1.04
VRK2-205ENST00000432057 ODF2LQ9ULJ1 636 aa21.58■■□□□ 1.04
VRK2-205ENST00000432057 PPP1R12BO60237 982 aaPredicted RBP21.57■■□□□ 1.04
VRK2-205ENST00000432057 ZNF131P52739 623 aa21.57■■□□□ 1.04
VRK2-205ENST00000432057 GNG11P61952 73 aa21.57■■□□□ 1.04
VRK2-205ENST00000432057 MEA1Q16626 185 aa21.57■■□□□ 1.04
VRK2-205ENST00000432057 UGCGQ16739 394 aa21.57■■□□□ 1.04
VRK2-205ENST00000432057 XRRA1Q6P2D8 792 aa21.57■■□□□ 1.04
VRK2-205ENST00000432057 WDR24Q96S15 920 aa21.57■■□□□ 1.04
VRK2-205ENST00000432057 EIF3DO15371 548 aaKnown RBP eCLIP21.56■■□□□ 1.04
VRK2-205ENST00000432057 CCNE2O96020 404 aa21.56■■□□□ 1.04
VRK2-205ENST00000432057 GUCY2CP25092 1073 aa21.56■■□□□ 1.04
VRK2-205ENST00000432057 QARSP47897 775 aaKnown RBP21.56■■□□□ 1.04
VRK2-205ENST00000432057 ZC2HC1CQ53FD0 456 aaPredicted RBP21.56■■□□□ 1.04
VRK2-205ENST00000432057 IQCDQ96DY2 449 aa21.56■■□□□ 1.04
VRK2-205ENST00000432057 FIZ1Q96SL8 496 aa21.56■■□□□ 1.04
VRK2-205ENST00000432057 ELP3Q9H9T3 547 aa21.56■■□□□ 1.04
VRK2-205ENST00000432057 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.56■■□□□ 1.04
VRK2-205ENST00000432057 MYH9P35579 1960 aaKnown RBP21.56■■□□□ 1.04
VRK2-205ENST00000432057 PEX10O60683 326 aa21.56■■□□□ 1.04
VRK2-205ENST00000432057 HIP1RO75146 1068 aa21.56■■□□□ 1.04
VRK2-205ENST00000432057 NDUFA10O95299 355 aa21.56■■□□□ 1.04
VRK2-205ENST00000432057 MAPK7Q13164 816 aa21.56■■□□□ 1.04
VRK2-205ENST00000432057 PADI6Q6TGC4 694 aa21.56■■□□□ 1.04
VRK2-205ENST00000432057 NSUN6Q8TEA1 469 aaKnown RBP21.56■■□□□ 1.04
VRK2-205ENST00000432057 IRX2Q9BZI1 471 aaPredicted RBP21.56■■□□□ 1.04
VRK2-205ENST00000432057 IKZF4Q9H2S9 585 aa21.56■■□□□ 1.04
VRK2-205ENST00000432057 SEL1LQ9UBV2 794 aa21.56■■□□□ 1.04
VRK2-205ENST00000432057 LRRC37A2A6NM11 1700 aa21.55■■□□□ 1.04
VRK2-205ENST00000432057 NR3C1P04150 777 aa21.55■■□□□ 1.04
VRK2-205ENST00000432057 IREB2P48200 963 aaKnown RBP21.55■■□□□ 1.04
VRK2-205ENST00000432057 RBM10P98175 930 aaKnown RBP21.55■■□□□ 1.04
VRK2-205ENST00000432057 KCNMA1Q12791 1236 aa21.55■■□□□ 1.04
VRK2-205ENST00000432057 GADL1Q6ZQY3 521 aa21.55■■□□□ 1.04
VRK2-205ENST00000432057 FAM178BQ8IXR5 827 aa21.55■■□□□ 1.04
VRK2-205ENST00000432057 DAW1Q8N136 415 aa21.55■■□□□ 1.04
VRK2-205ENST00000432057 ZNF397Q8NF99 534 aaPredicted RBP21.55■■□□□ 1.04
VRK2-205ENST00000432057 GPRASP2Q96D09 838 aa21.55■■□□□ 1.04
VRK2-205ENST00000432057 L2HGDHQ9H9P8 463 aa21.55■■□□□ 1.04
VRK2-205ENST00000432057 TCEAL9Q9UHQ7 104 aa21.55■■□□□ 1.04
VRK2-205ENST00000432057 DBR1Q9UK59 544 aaKnown RBP21.55■■□□□ 1.04
VRK2-205ENST00000432057 REXO2Q9Y3B8 237 aaKnown RBP21.55■■□□□ 1.04
VRK2-205ENST00000432057 EPN1Q9Y6I3 576 aaPredicted RBP21.55■■□□□ 1.04
VRK2-205ENST00000432057 WDR64B1ANS9 1081 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 JAK3P52333 1124 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 KRT76Q01546 638 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 ODR4Q5SWX8 454 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 MOB2Q70IA6 237 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 NLRX1Q86UT6 975 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 KSR1Q8IVT5 923 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 CDCA5Q96FF9 252 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 CLMNQ96JQ2 1002 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 INPP4AQ96PE3 977 aaPredicted RBP21.54■■□□□ 1.04
VRK2-205ENST00000432057 ZNHIT6Q9NWK9 470 aaKnown RBP21.54■■□□□ 1.04
VRK2-205ENST00000432057 TMEM150BA6NC51 233 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 CLIC2O15247 247 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 TGFB1I1O43294 461 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 LYPLA2O95372 231 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 RARRES1P49788 294 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 MAEAQ7L5Y9 396 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 NEK11Q8NG66 645 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 OTUD5Q96G74 571 aa21.54■■□□□ 1.04
VRK2-205ENST00000432057 ZNF215Q9UL58 517 aaPredicted RBP21.54■■□□□ 1.04
VRK2-205ENST00000432057 UBE4BO95155 1302 aa21.53■■□□□ 1.04
VRK2-205ENST00000432057 SCN4AP35499 1836 aa21.53■■□□□ 1.04
VRK2-205ENST00000432057 RGS20O76081 388 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms