RNA–Protein interactions for RNA: ENST00000431460.1

TRERNA1-201, translation regulatory long non-coding RNA 1, humanhuman

TSL 2 BASIC

Gene TRERNA1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERNA1-201ENST00000431460 SLC9A7Q96T83 725 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 NAP1L4Q99733 375 aaKnown RBP13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 OSBPL7Q9BZF2 842 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 FAM49AQ9H0Q0 323 aaPredicted RBP13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 PRDM12Q9H4Q4 367 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 SLC28A3Q9HAS3 691 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 FOXD4L1Q9NU39 408 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 SAMM50Q9Y512 469 aa13.45□□□□□ -0.26
TRERNA1-201ENST00000431460 COL6A3P12111 3177 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 TMEM265A0A087WTH1 108 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 FAM205CA6NFA0 338 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 DHX15O43143 795 aaKnown RBP13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 BAIAP3O94812 1187 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 PARNO95453 639 aaKnown RBP13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 TDP2O95551 362 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 CXCL10P02778 98 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 CA3P07451 260 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 GCFC2P16383 781 aaKnown RBP13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 SYT1P21579 422 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 ADAM17P78536 824 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 TMEM62Q0P6H9 643 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 GNL2Q13823 731 aaKnown RBP13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 Q4G0T1 1027 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 FAM160B1Q5W0V3 765 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 PPP4R3AQ6IN85 833 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 MIS18BP1Q6P0N0 1132 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 PDXDC2PQ6P474 469 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 HERC6Q8IVU3 1022 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 CKAP2LQ8IYA6 745 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 DBF4BQ8NFT6 615 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 TET1Q8NFU7 2136 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 DNAJB3Q8WWF6 145 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 LENG9Q96B70 501 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 CERS4Q9HA82 394 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 ZNF302Q9NR11 478 aa13.44□□□□□ -0.26
TRERNA1-201ENST00000431460 POTEB3A0JP26 581 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 KIF28PB7ZC32 967 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 MSH4O15457 936 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 TRAPPC10P48553 1259 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 IKBKEQ14164 716 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 LETM2Q2VYF4 491 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 MARCH8Q5T0T0 291 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 MCTP1Q6DN14 999 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 SWSAP1Q6NVH7 229 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 POTEBQ6S5H4 581 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 ABHD15Q6UXT9 468 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 ZBED2Q9BTP6 218 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 TBC1D22BQ9NU19 505 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 PCDHA11Q9Y5I1 949 aa13.43□□□□□ -0.26
TRERNA1-201ENST00000431460 TLL1O43897 1013 aa13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 GAS7O60861 476 aa13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 ATG7O95352 703 aa13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 GHRP10912 638 aa13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 LRCH2Q5VUJ6 765 aa13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 TAF2Q6P1X5 1199 aa13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 PLPPR4Q7Z2D5 763 aa13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 RSPH3Q86UC2 560 aa13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 MYOCDQ8IZQ8 938 aa13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 SLC17A8Q8NDX2 589 aa13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 MAFAQ8NHW3 353 aaPredicted RBP13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 GABBR1Q9UBS5 961 aa13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 DDX25Q9UHL0 483 aaKnown RBP13.42□□□□□ -0.26
TRERNA1-201ENST00000431460 ABHD14A-ACY1A0A1B0GW23 586 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 LCHNA4D1U4 455 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 VPS37CA5D8V6 355 aaPredicted RBP13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 RRN3P2A6NIE6 340 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 STX6O43752 255 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 CCNT1O60563 726 aaKnown RBP13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 CAND2O75155 1236 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 ARHGEF15O94989 841 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 CHRNA1P02708 482 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 PSAPP07602 524 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 IGFBP4P22692 258 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 KRT76Q01546 638 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 ORC2Q13416 577 aaPredicted RBP13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 PLEKHG4Q58EX7 1191 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 ZNF746Q6NUN9 644 aaPredicted RBP13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 BRAPQ7Z569 592 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 SPRYD3Q8NCJ5 442 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 PHOSPHO2Q8TCD6 241 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 ATP8B4Q8TF62 1192 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 PPM1EQ8WY54 764 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 SEPT8Q92599 483 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 PPP1R16BQ96T49 567 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 GAS2L1Q99501 681 aaPredicted RBP13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 TEKT3Q9BXF9 490 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 IFIH1Q9BYX4 1025 aaKnown RBP13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 UNC45AQ9H3U1 944 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 NOL7Q9UMY1 257 aaKnown RBP13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 MTMR6Q9Y217 621 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 CDY2AQ9Y6F7 541 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 PTPRSQ13332 1948 aa13.41□□□□□ -0.26
TRERNA1-201ENST00000431460 EYSQ5T1H1 3165 aa13.4□□□□□ -0.26
TRERNA1-201ENST00000431460 IGKV6D-21A0A0A0MT36 114 aa13.4□□□□□ -0.26
TRERNA1-201ENST00000431460 MBLAC1A4D2B0 266 aaPredicted RBP13.4□□□□□ -0.26
TRERNA1-201ENST00000431460 WDR64B1ANS9 1081 aa13.4□□□□□ -0.26
TRERNA1-201ENST00000431460 TBX3O15119 743 aa13.4□□□□□ -0.26
TRERNA1-201ENST00000431460 SLC37A4O43826 429 aa13.4□□□□□ -0.26
TRERNA1-201ENST00000431460 UPP2O95045 317 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms