RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 CCDC73Q6ZRK6 1079 aa12.31□□□□□ -0.44
CHD4-202ENST00000430771 CATSPER3Q86XQ3 398 aa12.31□□□□□ -0.44
CHD4-202ENST00000430771 TPH2Q8IWU9 490 aa12.31□□□□□ -0.44
CHD4-202ENST00000430771 ATP8B4Q8TF62 1192 aa12.31□□□□□ -0.44
CHD4-202ENST00000430771 BBXQ8WY36 941 aaPredicted RBP12.31□□□□□ -0.44
CHD4-202ENST00000430771 HSD17B14Q9BPX1 270 aa12.31□□□□□ -0.44
CHD4-202ENST00000430771 SEZ6LQ9BYH1 1024 aa12.31□□□□□ -0.44
CHD4-202ENST00000430771 STARD7Q9NQZ5 370 aa12.31□□□□□ -0.44
CHD4-202ENST00000430771 RGL1Q9NZL6 768 aa12.31□□□□□ -0.44
CHD4-202ENST00000430771 PPME1Q9Y570 386 aa12.31□□□□□ -0.44
CHD4-202ENST00000430771 COL1A2P08123 1366 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 A0A0U1RQG5 324 aaPredicted RBP12.3□□□□□ -0.44
CHD4-202ENST00000430771 A0A1W2PQ45 241 aaPredicted RBP12.3□□□□□ -0.44
CHD4-202ENST00000430771 A0A1W2PQY0 241 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 DDX11L8A8MPP1 907 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 HBP1O60381 514 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 SLITRK3O94933 977 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 SPATA31C1P0DKV0 1188 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 CDC25AP30304 524 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 YWHABP31946 246 aaKnown RBP12.3□□□□□ -0.44
CHD4-202ENST00000430771 STAT6P42226 847 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 UBE2HP62256 183 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 KARSQ15046 597 aaKnown RBP12.3□□□□□ -0.44
CHD4-202ENST00000430771 PLCB4Q15147 1175 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 KIAA0753Q2KHM9 967 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 TMEM119Q4V9L6 283 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 OTUD6AQ7L8S5 288 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 FSIP1Q8NA03 581 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 CCDC34Q96HJ3 373 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 ABHD8Q96I13 439 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 EPSTI1Q96J88 318 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 NACC1Q96RE7 527 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 MMTAG2Q9BU76 263 aaKnown RBP12.3□□□□□ -0.44
CHD4-202ENST00000430771 MAGEF1Q9HAY2 307 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 NRBP2Q9NSY0 501 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 DDX19AQ9NUU7 478 aaKnown RBP12.3□□□□□ -0.44
CHD4-202ENST00000430771 STK17AQ9UEE5 414 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 KIAA1024Q9UPX6 916 aa12.3□□□□□ -0.44
CHD4-202ENST00000430771 KAT6AQ92794 2004 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 HAS3O00219 553 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 ZNF862O60290 1169 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 PFKFB1P16118 471 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 PLCG1P19174 1290 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 PTMSP20962 102 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 PPFIA1Q13136 1202 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 GRB10Q13322 594 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 RRAGBQ5VZM2 374 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 TNS4Q8IZW8 715 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 C7orf31Q8N865 590 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 KAT2BQ92831 832 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 VTI1AQ96AJ9 217 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 CUEDC2Q9H467 287 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 ANKEF1Q9NU02 776 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 KCNH3Q9ULD8 1083 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 DNM3Q9UQ16 869 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 MROH7Q68CQ1 1323 aa12.29□□□□□ -0.44
CHD4-202ENST00000430771 FAM237AA0A1B0GTK4 181 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 ARHGEF35A5YM69 484 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 PRPF40AO75400 957 aaKnown RBP12.28□□□□□ -0.44
CHD4-202ENST00000430771 SMIM10L2AP0DMW4 78 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 SMIM10L2BP0DMW5 78 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 GNAT1P11488 350 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 XRCC6P12956 609 aaKnown RBP eCLIP12.28□□□□□ -0.44
CHD4-202ENST00000430771 SYKP43405 635 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 CHMP4BP1P59074 171 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 PTPN11Q06124 597 aaPredicted RBP12.28□□□□□ -0.44
CHD4-202ENST00000430771 TPRNQ4KMQ1 711 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 FAM47CQ5HY64 1035 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 ZNF484Q5JVG2 852 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 NFRKBQ6P4R8 1299 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 USP49Q70CQ1 688 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 SESTD1Q86VW0 696 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 PDILTQ8N807 584 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 IQUBQ8NA54 791 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 LARP4BQ92615 738 aaKnown RBP12.28□□□□□ -0.44
CHD4-202ENST00000430771 PNMA5Q96PV4 448 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 JPH2Q9BR39 696 aaPredicted RBP12.28□□□□□ -0.44
CHD4-202ENST00000430771 C11orf49Q9H6J7 331 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 WRAP73Q9P2S5 460 aaPredicted RBP12.28□□□□□ -0.44
CHD4-202ENST00000430771 USP25Q9UHP3 1055 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 DBR1Q9UK59 544 aaKnown RBP12.28□□□□□ -0.44
CHD4-202ENST00000430771 HPSEQ9Y251 543 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 NRCAMQ92823 1304 aa12.28□□□□□ -0.44
CHD4-202ENST00000430771 KIAA0100Q14667 2235 aaKnown RBP12.27□□□□□ -0.44
CHD4-202ENST00000430771 CENPFP49454 3210 aa12.27□□□□□ -0.44
CHD4-202ENST00000430771 A0A1B0GVL5 298 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 C17orf102A2RUQ5 167 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 RRN3P2A6NIE6 340 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 EYA4O95677 639 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 ATP4AP20648 1035 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 PSMC6P62333 389 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 FAM160A1Q05DH4 1040 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 ITGA7Q13683 1181 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 GRIK4Q16099 956 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 ECM1Q16610 540 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 MTERF2Q49AM1 385 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 XKR9Q5GH70 373 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 PLA2G4FQ68DD2 849 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 ANO5Q75V66 913 aa12.27□□□□□ -0.45
CHD4-202ENST00000430771 TRMT1LQ7Z2T5 733 aaKnown RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms