RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 CXXC1Q9P0U4 656 aaPredicted RBP7.54□□□□□ -1.2
SMC6-205ENST00000430591 KAT6AQ92794 2004 aa7.54□□□□□ -1.2
SMC6-205ENST00000430591 CDH23Q9H251 3354 aa7.54□□□□□ -1.2
SMC6-205ENST00000430591 ESYT2A0FGR8 921 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 DHX15O43143 795 aaKnown RBP7.53□□□□□ -1.2
SMC6-205ENST00000430591 TREHO43280 583 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 SLC37A4O43826 429 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 ZEB2O60315 1214 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 F2P00734 622 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 TIMP1P01033 207 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 BMP8BP34820 402 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 MRPL12P52815 198 aaKnown RBP7.53□□□□□ -1.2
SMC6-205ENST00000430591 NLRP5P59047 1200 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 LAMC2Q13753 1193 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 DGKDQ16760 1214 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 INF2Q27J81 1249 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 TRIM71Q2Q1W2 868 aaKnown RBP7.53□□□□□ -1.2
SMC6-205ENST00000430591 TMEM240Q5SV17 173 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 TRAF7Q6Q0C0 670 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 METTL7BQ6UX53 244 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 ZNF365Q70YC5 407 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 TRMT1LQ7Z2T5 733 aaKnown RBP7.53□□□□□ -1.2
SMC6-205ENST00000430591 SPRED2Q7Z698 418 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 DEFB128Q7Z7B8 93 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 ZNF598Q86UK7 904 aaKnown RBP7.53□□□□□ -1.2
SMC6-205ENST00000430591 PLA2G4DQ86XP0 818 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 TDHQ8IZJ6 230 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 SAMD3Q8N6K7 520 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 SYMPKQ92797 1274 aaKnown RBP7.53□□□□□ -1.2
SMC6-205ENST00000430591 GPRASP2Q96D09 838 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 FAM161BQ96MY7 647 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 TOX2Q96NM4 488 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 MPHOSPH6Q99547 160 aaKnown RBP7.53□□□□□ -1.2
SMC6-205ENST00000430591 PHF20Q9BVI0 1012 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 MAF1Q9H063 256 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 HIPK3Q9H422 1215 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 AGO4Q9HCK5 861 aaKnown RBP7.53□□□□□ -1.2
SMC6-205ENST00000430591 SETD4Q9NVD3 440 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 ORC3Q9UBD5 711 aaPredicted RBP7.53□□□□□ -1.2
SMC6-205ENST00000430591 PRKAG2Q9UGJ0 569 aa7.53□□□□□ -1.2
SMC6-205ENST00000430591 MYH9P35579 1960 aaKnown RBP7.52□□□□□ -1.21
SMC6-205ENST00000430591 CCDC196A0A1B0GTZ2 297 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 TMEM150BA6NC51 233 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 B4DLN1 442 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 MEIS1O00470 390 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 CPLX1O14810 134 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 MSH4O15457 936 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 CABYRO75952 493 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 ARHGEF15O94989 841 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 DEXIO95424 95 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 SMIM10L2AP0DMW4 78 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 SMIM10L2BP0DMW5 78 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 ATP4AP20648 1035 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 TCF7P36402 384 aaPredicted RBP7.52□□□□□ -1.21
SMC6-205ENST00000430591 RBM25P49756 843 aaKnown RBP7.52□□□□□ -1.21
SMC6-205ENST00000430591 MMP16P51512 607 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 ACTR2P61160 394 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 AKAP17AQ02040 695 aaKnown RBP7.52□□□□□ -1.21
SMC6-205ENST00000430591 FPGSQ05932 587 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 TRAF1Q13077 416 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 PTGISQ16647 500 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 UGCGQ16739 394 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 GNPTABQ3T906 1256 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 CEP55Q53EZ4 464 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 PRR16Q569H4 304 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 ZNF697Q5TEC3 545 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 MFSD5Q6N075 450 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 BLIDQ8IZY5 108 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 REXO1Q8N1G1 1221 aaKnown RBP7.52□□□□□ -1.21
SMC6-205ENST00000430591 TBCKQ8TEA7 893 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 SPIRE2Q8WWL2 714 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 LBHD1Q9BQE6 289 aaPredicted RBP7.52□□□□□ -1.21
SMC6-205ENST00000430591 C6orf50Q9HD87 102 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 GTF2IRD1Q9UHL9 959 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 PCDHGC3Q9UN70 934 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 PCDHA4Q9UN74 947 aa7.52□□□□□ -1.21
SMC6-205ENST00000430591 BTBD18B2RXH4 712 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 KIF28PB7ZC32 967 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 H3BRB1 525 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 hCG_1984214I3L0E3 225 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 NOP56O00567 594 aaKnown RBP7.51□□□□□ -1.21
SMC6-205ENST00000430591 TLR3O15455 904 aaKnown RBP7.51□□□□□ -1.21
SMC6-205ENST00000430591 CTSHP09668 335 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 MYOGP15173 224 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 HOXC8P31273 242 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 ZNF76P36508 570 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 RABGGTBP53611 331 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 IGBP1P78318 339 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 AP3B2Q13367 1082 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 NEDD9Q14511 834 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 MARCH8Q5T0T0 291 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 ZNF618Q5T7W0 954 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 NFRKBQ6P4R8 1299 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 PIK3AP1Q6ZUJ8 805 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 OTOP2Q7RTS6 562 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 NLRX1Q86UT6 975 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 CCDC60Q8IWA6 550 aaPredicted RBP7.51□□□□□ -1.21
SMC6-205ENST00000430591 TRIM22Q8IYM9 498 aa7.51□□□□□ -1.21
SMC6-205ENST00000430591 ZNF713Q8N859 430 aaPredicted RBP7.51□□□□□ -1.21
SMC6-205ENST00000430591 C7orf31Q8N865 590 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms