RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PCDHA5Q9Y5H7 936 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 POTEFA5A3E0 1075 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 POTEIP0CG38 1075 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 NR2F2P24468 414 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 ATP2C1P98194 919 aaPredicted RBP14.12□□□□□ -0.15
PTCH1-207ENST00000429896 MAPK6Q16659 721 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 POTEGQ6S5H5 508 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 POTEEQ6S8J3 1075 aa14.12□□□□□ -0.15
PTCH1-207ENST00000429896 YWHABP31946 246 aaKnown RBP14.11□□□□□ -0.15
PTCH1-207ENST00000429896 METTL23Q86XA0 190 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 NACA2Q9H009 215 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 ZMYND15Q9H091 742 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 RPF1Q9H9Y2 349 aaKnown RBP14.11□□□□□ -0.15
PTCH1-207ENST00000429896 GBP6Q6ZN66 633 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 RNF34Q969K3 372 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 LSM14BQ9BX40 385 aaKnown RBP14.11□□□□□ -0.15
PTCH1-207ENST00000429896 SFI1A8K8P3 1242 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 KRT9P35527 623 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 OSTNP61366 133 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 PDIA5Q14554 519 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 XKR3Q5GH77 459 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 PPM1EQ8WY54 764 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 KIF2CQ99661 725 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 SELENOSQ9BQE4 189 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 NAA15Q9BXJ9 866 aaKnown RBP14.11□□□□□ -0.15
PTCH1-207ENST00000429896 RRAGDQ9NQL2 400 aaPredicted RBP14.11□□□□□ -0.15
PTCH1-207ENST00000429896 KDM3BQ7LBC6 1761 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 TNNC1P63316 161 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 SURF1Q15526 300 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 ARHGAP44Q17R89 818 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 DNAJC21Q5F1R6 531 aaKnown RBP14.11□□□□□ -0.15
PTCH1-207ENST00000429896 CCDC186Q7Z3E2 898 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 MOV10L1Q9BXT6 1211 aaKnown RBP14.11□□□□□ -0.15
PTCH1-207ENST00000429896 HSF2BPO75031 334 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 YBX3P16989 372 aaKnown RBP eCLIP14.11□□□□□ -0.15
PTCH1-207ENST00000429896 PLCB3Q01970 1234 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 P2RX5Q93086 422 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 RIT2Q99578 217 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 RIOX1Q9H6W3 641 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 KCNH7Q9NS40 1196 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 TRIM17Q9Y577 477 aa14.11□□□□□ -0.15
PTCH1-207ENST00000429896 U2AF2P26368 475 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTCH1-207ENST00000429896 CDC42EP1Q00587 391 aa14.1□□□□□ -0.15
PTCH1-207ENST00000429896 DNERQ8NFT8 737 aa14.1□□□□□ -0.15
PTCH1-207ENST00000429896 ANKS1AQ92625 1134 aa14.1□□□□□ -0.15
PTCH1-207ENST00000429896 CLMNQ96JQ2 1002 aa14.1□□□□□ -0.15
PTCH1-207ENST00000429896 NOLC1Q14978 699 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTCH1-207ENST00000429896 TWF2Q6IBS0 349 aaKnown RBP14.1□□□□□ -0.15
PTCH1-207ENST00000429896 MKL1Q969V6 931 aa14.1□□□□□ -0.15
PTCH1-207ENST00000429896 IQCDQ96DY2 449 aa14.1□□□□□ -0.15
PTCH1-207ENST00000429896 KMT5BQ4FZB7 885 aa14.1□□□□□ -0.15
PTCH1-207ENST00000429896 ARHGEF37A1IGU5 675 aa14.1□□□□□ -0.15
PTCH1-207ENST00000429896 CLIC2O15247 247 aa14.1□□□□□ -0.15
PTCH1-207ENST00000429896 CCDC25Q86WR0 208 aa14.1□□□□□ -0.15
PTCH1-207ENST00000429896 FAM186BQ8IYM0 893 aa14.1□□□□□ -0.15
PTCH1-207ENST00000429896 DDX12PQ92771 950 aa14.1□□□□□ -0.15
PTCH1-207ENST00000429896 MYL7Q01449 175 aa14.1□□□□□ -0.15
PTCH1-207ENST00000429896 IRX5P78411 483 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-207ENST00000429896 SPATA1Q5VX52 437 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 PXMP2Q9NR77 195 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 NFIBO00712 420 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 USP2O75604 605 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-207ENST00000429896 KIF5AQ12840 1032 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 LONRF3Q496Y0 759 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 FBXO16Q8IX29 292 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-207ENST00000429896 ARRDC4Q8NCT1 418 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 NDC80O14777 642 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 SH3BP5O60239 455 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 LDHAP00338 332 aaKnown RBP14.09□□□□□ -0.15
PTCH1-207ENST00000429896 SKILP12757 684 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 KIAA1841Q6NSI8 718 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 UNC13DQ70J99 1090 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 GLT1D1Q96MS3 346 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 LBHD1Q9BQE6 289 aaPredicted RBP14.09□□□□□ -0.15
PTCH1-207ENST00000429896 A0A087WWV3 80 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 FKTNO75072 461 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 TATDN1Q6P1N9 297 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 ERAP1Q9NZ08 941 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 FAM205CA6NFA0 338 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 CCDC160A6NGH7 325 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 ADORA2AP29274 412 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 TFAMQ00059 246 aaKnown RBP14.09□□□□□ -0.15
PTCH1-207ENST00000429896 CEP112Q8N8E3 955 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 MAN1B1Q9UKM7 699 aa14.09□□□□□ -0.15
PTCH1-207ENST00000429896 MCM3P25205 808 aa14.08□□□□□ -0.15
PTCH1-207ENST00000429896 TMEM63CQ9P1W3 806 aa14.08□□□□□ -0.15
PTCH1-207ENST00000429896 SLC16A4O15374 487 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 EYA4O95677 639 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 PPP2R3AQ06190 1150 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 SFMBT2Q5VUG0 894 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 SFR1Q86XK3 245 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 RAB3IL1Q8TBN0 382 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 NKRFO15226 690 aaKnown RBP eCLIP14.08□□□□□ -0.16
PTCH1-207ENST00000429896 TACC1O75410 805 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 SLC9C1Q4G0N8 1177 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 URGCPQ8TCY9 931 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 NUCKS1Q9H1E3 243 aaKnown RBP14.08□□□□□ -0.16
PTCH1-207ENST00000429896 ASTN2O75129 1339 aaPredicted RBP14.08□□□□□ -0.16
PTCH1-207ENST00000429896 SPDYE5A6NIY4 337 aa14.08□□□□□ -0.16
PTCH1-207ENST00000429896 ZBTB48P10074 688 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms