RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 EVPLQ92817 2033 aa19.67■□□□□ 0.74
CTSD-203ENST00000429746 CHD7Q9P2D1 2997 aa19.67■□□□□ 0.74
CTSD-203ENST00000429746 CXCL10P02778 98 aa19.66■□□□□ 0.74
CTSD-203ENST00000429746 SELPP16109 830 aa19.66■□□□□ 0.74
CTSD-203ENST00000429746 MKRN4PQ13434 485 aaPredicted RBP19.66■□□□□ 0.74
CTSD-203ENST00000429746 LRRC8DQ7L1W4 858 aa19.66■□□□□ 0.74
CTSD-203ENST00000429746 SNX21Q969T3 373 aa19.66■□□□□ 0.74
CTSD-203ENST00000429746 CEP89Q96ST8 783 aa19.66■□□□□ 0.74
CTSD-203ENST00000429746 MTIF3Q9H2K0 278 aaKnown RBP19.66■□□□□ 0.74
CTSD-203ENST00000429746 AZI2Q9H6S1 392 aa19.66■□□□□ 0.74
CTSD-203ENST00000429746 CXXC1Q9P0U4 656 aaPredicted RBP19.66■□□□□ 0.74
CTSD-203ENST00000429746 WRAP73Q9P2S5 460 aaPredicted RBP19.66■□□□□ 0.74
CTSD-203ENST00000429746 GABBR1Q9UBS5 961 aa19.66■□□□□ 0.74
CTSD-203ENST00000429746 GBF1Q92538 1859 aa19.66■□□□□ 0.74
CTSD-203ENST00000429746 LOXHD1Q8IVV2 1947 aa19.66■□□□□ 0.74
CTSD-203ENST00000429746 POTEB3A0JP26 581 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 CHMP2AO43633 222 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 PSAPP07602 524 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 SFNP31947 248 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 JAK3P52333 1124 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 MGAT3Q09327 533 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 FAM26DQ5JW98 314 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 PDXDC2PQ6P474 469 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 POTEBQ6S5H4 581 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 RPUSD2Q8IZ73 545 aaKnown RBP19.65■□□□□ 0.74
CTSD-203ENST00000429746 C4orf32Q8N8J7 132 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 RDM1Q8NG50 284 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 HERVK_113Q902F9 699 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 NAP1L4Q99733 375 aaKnown RBP19.65■□□□□ 0.74
CTSD-203ENST00000429746 SEMA6BQ9H3T3 888 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 TUBE1Q9UJT0 475 aa19.65■□□□□ 0.74
CTSD-203ENST00000429746 BACH1O14867 736 aa19.64■□□□□ 0.73
CTSD-203ENST00000429746 RFC2P35250 354 aa19.64■□□□□ 0.73
CTSD-203ENST00000429746 NBR1Q14596 966 aa19.64■□□□□ 0.73
CTSD-203ENST00000429746 SAFBQ15424 915 aaKnown RBP eCLIP19.64■□□□□ 0.73
CTSD-203ENST00000429746 FAM160B1Q5W0V3 765 aa19.64■□□□□ 0.73
CTSD-203ENST00000429746 LINC01465Q8N7H1 131 aa19.64■□□□□ 0.73
CTSD-203ENST00000429746 SLC17A8Q8NDX2 589 aa19.64■□□□□ 0.73
CTSD-203ENST00000429746 ARID2Q68CP9 1835 aa19.64■□□□□ 0.73
CTSD-203ENST00000429746 MICAL3Q7RTP6 2002 aa19.63■□□□□ 0.73
CTSD-203ENST00000429746 COL1A2P08123 1366 aa19.63■□□□□ 0.73
CTSD-203ENST00000429746 RRN3P2A6NIE6 340 aa19.63■□□□□ 0.73
CTSD-203ENST00000429746 HBP1O60381 514 aa19.63■□□□□ 0.73
CTSD-203ENST00000429746 C22orf31O95567 290 aa19.63■□□□□ 0.73
CTSD-203ENST00000429746 GNAT1P11488 350 aa19.63■□□□□ 0.73
CTSD-203ENST00000429746 TARBP2Q15633 366 aaKnown RBP19.63■□□□□ 0.73
CTSD-203ENST00000429746 MIER3Q7Z3K6 550 aa19.63■□□□□ 0.73
CTSD-203ENST00000429746 CCDC155Q8N6L0 562 aa19.63■□□□□ 0.73
CTSD-203ENST00000429746 GUCD1Q96NT3 240 aa19.63■□□□□ 0.73
CTSD-203ENST00000429746 TRPC6Q9Y210 931 aa19.63■□□□□ 0.73
CTSD-203ENST00000429746 TMEM150BA6NC51 233 aa19.62■□□□□ 0.73
CTSD-203ENST00000429746 K7ELQ4 463 aaPredicted RBP19.62■□□□□ 0.73
CTSD-203ENST00000429746 CAND2O75155 1236 aa19.62■□□□□ 0.73
CTSD-203ENST00000429746 FGBP02675 491 aa19.62■□□□□ 0.73
CTSD-203ENST00000429746 CHRNA1P02708 482 aa19.62■□□□□ 0.73
CTSD-203ENST00000429746 PFKMP08237 780 aa19.62■□□□□ 0.73
CTSD-203ENST00000429746 THPOP40225 353 aa19.62■□□□□ 0.73
CTSD-203ENST00000429746 IGBP1P78318 339 aa19.62■□□□□ 0.73
CTSD-203ENST00000429746 PRKCEQ02156 737 aa19.62■□□□□ 0.73
CTSD-203ENST00000429746 MTHFD1LQ6UB35 978 aa19.62■□□□□ 0.73
CTSD-203ENST00000429746 DEFB128Q7Z7B8 93 aa19.62■□□□□ 0.73
CTSD-203ENST00000429746 RETREG2Q8NC44 543 aa19.62■□□□□ 0.73
CTSD-203ENST00000429746 BBXQ8WY36 941 aaPredicted RBP19.62■□□□□ 0.73
CTSD-203ENST00000429746 SMC3Q9UQE7 1217 aa19.62■□□□□ 0.73
CTSD-203ENST00000429746 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.62■□□□□ 0.73
CTSD-203ENST00000429746 PCDHA2Q9Y5H9 948 aa19.62■□□□□ 0.73
CTSD-203ENST00000429746 NEMFO60524 1076 aa19.61■□□□□ 0.73
CTSD-203ENST00000429746 OATP04181 439 aa19.61■□□□□ 0.73
CTSD-203ENST00000429746 TRAPPC10P48553 1259 aa19.61■□□□□ 0.73
CTSD-203ENST00000429746 TAF2Q6P1X5 1199 aa19.61■□□□□ 0.73
CTSD-203ENST00000429746 OTOP2Q7RTS6 562 aa19.61■□□□□ 0.73
CTSD-203ENST00000429746 INTS4Q96HW7 963 aaKnown RBP19.61■□□□□ 0.73
CTSD-203ENST00000429746 SAMM50Q9Y512 469 aa19.61■□□□□ 0.73
CTSD-203ENST00000429746 RSPH10B2B2RC85 870 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 CTSHP09668 335 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 RSPH10BP0C881 870 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 KLRC1P26715 233 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 MCM7P33993 719 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 ORC2Q13416 577 aaPredicted RBP19.6■□□□□ 0.73
CTSD-203ENST00000429746 ZNF174Q15697 407 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 CALCRLQ16602 461 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 ZNF484Q5JVG2 852 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 TTC38Q5R3I4 469 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 ANO5Q75V66 913 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 SLFN12Q8IYM2 578 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 KIAA0319LQ8IZA0 1049 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 BANK1Q8NDB2 785 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 DNAJB3Q8WWF6 145 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 PCDHB6Q9Y5E3 794 aa19.6■□□□□ 0.73
CTSD-203ENST00000429746 SMIM35A0A1B0GVV1 85 aa19.59■□□□□ 0.73
CTSD-203ENST00000429746 ATP2B1P20020 1258 aa19.59■□□□□ 0.73
CTSD-203ENST00000429746 DNAJB2P25686 324 aa19.59■□□□□ 0.73
CTSD-203ENST00000429746 EPHA7Q15375 998 aa19.59■□□□□ 0.73
CTSD-203ENST00000429746 PLEKHG4Q58EX7 1191 aa19.59■□□□□ 0.73
CTSD-203ENST00000429746 CDX2Q99626 313 aaPredicted RBP19.59■□□□□ 0.73
CTSD-203ENST00000429746 HSD17B14Q9BPX1 270 aa19.59■□□□□ 0.73
CTSD-203ENST00000429746 NIFKQ9BYG3 293 aaKnown RBP19.59■□□□□ 0.73
CTSD-203ENST00000429746 TTYH1Q9H313 450 aaPredicted RBP19.59■□□□□ 0.73
CTSD-203ENST00000429746 TTC12Q9H892 705 aaPredicted RBP19.59■□□□□ 0.73
CTSD-203ENST00000429746 RGL1Q9NZL6 768 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms