RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 PDIA5Q14554 519 aa25.05■■□□□ 1.6
PTPN18-205ENST00000428843 IGSF22Q8N9C0 903 aa25.05■■□□□ 1.6
PTPN18-205ENST00000428843 BBXQ8WY36 941 aaPredicted RBP25.05■■□□□ 1.6
PTPN18-205ENST00000428843 FAM167AQ96KS9 214 aa25.05■■□□□ 1.6
PTPN18-205ENST00000428843 ZNF396Q96N95 335 aaPredicted RBP25.05■■□□□ 1.6
PTPN18-205ENST00000428843 LXNQ9BS40 222 aa25.05■■□□□ 1.6
PTPN18-205ENST00000428843 WRAP73Q9P2S5 460 aaPredicted RBP25.05■■□□□ 1.6
PTPN18-205ENST00000428843 NOD1Q9Y239 953 aa25.05■■□□□ 1.6
PTPN18-205ENST00000428843 TRIM43BA6NCK2 446 aa25.04■■□□□ 1.6
PTPN18-205ENST00000428843 TREHO43280 583 aa25.04■■□□□ 1.6
PTPN18-205ENST00000428843 SLITRK3O94933 977 aa25.04■■□□□ 1.6
PTPN18-205ENST00000428843 STBD1O95210 358 aa25.04■■□□□ 1.6
PTPN18-205ENST00000428843 CYP2C9P11712 490 aa25.04■■□□□ 1.6
PTPN18-205ENST00000428843 IGBP1P78318 339 aa25.04■■□□□ 1.6
PTPN18-205ENST00000428843 CTTNQ14247 550 aaKnown RBP25.04■■□□□ 1.6
PTPN18-205ENST00000428843 NEK9Q8TD19 979 aa25.04■■□□□ 1.6
PTPN18-205ENST00000428843 TRIM43Q96BQ3 446 aaPredicted RBP25.04■■□□□ 1.6
PTPN18-205ENST00000428843 HSD17B14Q9BPX1 270 aa25.04■■□□□ 1.6
PTPN18-205ENST00000428843 RAB34Q9BZG1 259 aa25.04■■□□□ 1.6
PTPN18-205ENST00000428843 NRBP2Q9NSY0 501 aa25.04■■□□□ 1.6
PTPN18-205ENST00000428843 TFIP11Q9UBB9 837 aaKnown RBP25.04■■□□□ 1.6
PTPN18-205ENST00000428843 LRWD1Q9UFC0 647 aa25.04■■□□□ 1.6
PTPN18-205ENST00000428843 TBX21Q9UL17 535 aa25.04■■□□□ 1.6
PTPN18-205ENST00000428843 ZMYND8Q9ULU4 1186 aaPredicted RBP25.04■■□□□ 1.6
PTPN18-205ENST00000428843 VWA3AA6NCI4 1184 aa25.03■■□□□ 1.6
PTPN18-205ENST00000428843 RRN3P2A6NIE6 340 aa25.03■■□□□ 1.6
PTPN18-205ENST00000428843 DKC1O60832 514 aaKnown RBP eCLIP25.03■■□□□ 1.6
PTPN18-205ENST00000428843 SYN1P17600 705 aa25.03■■□□□ 1.6
PTPN18-205ENST00000428843 MARCH8Q5T0T0 291 aa25.03■■□□□ 1.6
PTPN18-205ENST00000428843 TPH2Q8IWU9 490 aa25.03■■□□□ 1.6
PTPN18-205ENST00000428843 TRAPPC12Q8WVT3 735 aa25.03■■□□□ 1.6
PTPN18-205ENST00000428843 ZBTB42B2RXF5 422 aa25.02■■□□□ 1.6
PTPN18-205ENST00000428843 KIAA0355O15063 1070 aa25.02■■□□□ 1.6
PTPN18-205ENST00000428843 NASPP49321 788 aaPredicted RBP25.02■■□□□ 1.6
PTPN18-205ENST00000428843 XKR3Q5GH77 459 aa25.02■■□□□ 1.6
PTPN18-205ENST00000428843 ZNF484Q5JVG2 852 aa25.02■■□□□ 1.6
PTPN18-205ENST00000428843 C4orf19Q8IY42 314 aa25.02■■□□□ 1.6
PTPN18-205ENST00000428843 ERMNQ8TAM6 284 aa25.02■■□□□ 1.6
PTPN18-205ENST00000428843 DHX38Q92620 1227 aaKnown RBP25.02■■□□□ 1.6
PTPN18-205ENST00000428843 ZSWIM4Q9H7M6 989 aa25.02■■□□□ 1.6
PTPN18-205ENST00000428843 PCDH10Q9P2E7 1040 aa25.02■■□□□ 1.6
PTPN18-205ENST00000428843 PRKAG2Q9UGJ0 569 aa25.02■■□□□ 1.6
PTPN18-205ENST00000428843 COL1A2P08123 1366 aa25.02■■□□□ 1.6
PTPN18-205ENST00000428843 MBLAC1A4D2B0 266 aaPredicted RBP25.01■■□□□ 1.59
PTPN18-205ENST00000428843 DDX11L8A8MPP1 907 aa25.01■■□□□ 1.59
PTPN18-205ENST00000428843 MED24O75448 989 aa25.01■■□□□ 1.59
PTPN18-205ENST00000428843 SPATA31C1P0DKV0 1188 aa25.01■■□□□ 1.59
PTPN18-205ENST00000428843 MARCKSP29966 332 aaPredicted RBP25.01■■□□□ 1.59
PTPN18-205ENST00000428843 NUCB2P80303 420 aa25.01■■□□□ 1.59
PTPN18-205ENST00000428843 PTK7Q13308 1070 aa25.01■■□□□ 1.59
PTPN18-205ENST00000428843 SLC39A14Q15043 492 aa25.01■■□□□ 1.59
PTPN18-205ENST00000428843 SERINC5Q86VE9 423 aa25.01■■□□□ 1.59
PTPN18-205ENST00000428843 ZBTB10Q96DT7 871 aa25.01■■□□□ 1.59
PTPN18-205ENST00000428843 POLR3CQ9BUI4 534 aaPredicted RBP25.01■■□□□ 1.59
PTPN18-205ENST00000428843 TUFT1Q9NNX1 390 aa25.01■■□□□ 1.59
PTPN18-205ENST00000428843 SEPT9Q9UHD8 586 aaPredicted RBP25.01■■□□□ 1.59
PTPN18-205ENST00000428843 TUBE1Q9UJT0 475 aa25.01■■□□□ 1.59
PTPN18-205ENST00000428843 TNRC18O15417 2968 aaPredicted RBP25■■□□□ 1.59
PTPN18-205ENST00000428843 TMEM150BA6NC51 233 aa25■■□□□ 1.59
PTPN18-205ENST00000428843 PP2D1A8MPX8 630 aa25■■□□□ 1.59
PTPN18-205ENST00000428843 DNM1Q05193 864 aaKnown RBP25■■□□□ 1.59
PTPN18-205ENST00000428843 GRIN1Q05586 938 aa25■■□□□ 1.59
PTPN18-205ENST00000428843 CATSPER3Q86XQ3 398 aa25■■□□□ 1.59
PTPN18-205ENST00000428843 LINC00301Q8NCQ3 95 aa25■■□□□ 1.59
PTPN18-205ENST00000428843 WNT8BQ93098 351 aa25■■□□□ 1.59
PTPN18-205ENST00000428843 NOC4LQ9BVI4 516 aaKnown RBP25■■□□□ 1.59
PTPN18-205ENST00000428843 NIFKQ9BYG3 293 aaKnown RBP25■■□□□ 1.59
PTPN18-205ENST00000428843 HIPK3Q9H422 1215 aa25■■□□□ 1.59
PTPN18-205ENST00000428843 LTBP2Q14767 1821 aa25■■□□□ 1.59
PTPN18-205ENST00000428843 LYPLA2O95372 231 aa24.99■■□□□ 1.59
PTPN18-205ENST00000428843 ITGB8P26012 769 aa24.99■■□□□ 1.59
PTPN18-205ENST00000428843 RPA1P27694 616 aa24.99■■□□□ 1.59
PTPN18-205ENST00000428843 CDC25AP30304 524 aa24.99■■□□□ 1.59
PTPN18-205ENST00000428843 STK38Q15208 465 aa24.99■■□□□ 1.59
PTPN18-205ENST00000428843 HAUS3Q68CZ6 603 aa24.99■■□□□ 1.59
PTPN18-205ENST00000428843 ATL3Q6DD88 541 aa24.99■■□□□ 1.59
PTPN18-205ENST00000428843 RUFY4Q6ZNE9 571 aa24.99■■□□□ 1.59
PTPN18-205ENST00000428843 ANO5Q75V66 913 aa24.99■■□□□ 1.59
PTPN18-205ENST00000428843 SNX29Q8TEQ0 813 aa24.99■■□□□ 1.59
PTPN18-205ENST00000428843 PPP1R12CQ9BZL4 782 aa24.99■■□□□ 1.59
PTPN18-205ENST00000428843 FBXO2Q9UK22 296 aaPredicted RBP24.99■■□□□ 1.59
PTPN18-205ENST00000428843 STK24Q9Y6E0 443 aa24.99■■□□□ 1.59
PTPN18-205ENST00000428843 MORC2Q9Y6X9 1032 aaPredicted RBP24.99■■□□□ 1.59
PTPN18-205ENST00000428843 UMODL1Q5DID0 1318 aa24.98■■□□□ 1.59
PTPN18-205ENST00000428843 H0YGN5 161 aa24.98■■□□□ 1.59
PTPN18-205ENST00000428843 YEATS4O95619 227 aa24.98■■□□□ 1.59
PTPN18-205ENST00000428843 RAG1P15918 1043 aa24.98■■□□□ 1.59
PTPN18-205ENST00000428843 KLRC1P26715 233 aa24.98■■□□□ 1.59
PTPN18-205ENST00000428843 YWHABP31946 246 aaKnown RBP24.98■■□□□ 1.59
PTPN18-205ENST00000428843 CCT6AP40227 531 aaKnown RBP24.98■■□□□ 1.59
PTPN18-205ENST00000428843 TARBP2Q15633 366 aaKnown RBP24.98■■□□□ 1.59
PTPN18-205ENST00000428843 TRIM71Q2Q1W2 868 aaKnown RBP24.98■■□□□ 1.59
PTPN18-205ENST00000428843 MTERF2Q49AM1 385 aa24.98■■□□□ 1.59
PTPN18-205ENST00000428843 PLA2G4FQ68DD2 849 aa24.98■■□□□ 1.59
PTPN18-205ENST00000428843 MTHFD1LQ6UB35 978 aa24.98■■□□□ 1.59
PTPN18-205ENST00000428843 SH2D3AQ9BRG2 576 aa24.98■■□□□ 1.59
PTPN18-205ENST00000428843 SRPRBQ9Y5M8 271 aaKnown RBP24.98■■□□□ 1.59
PTPN18-205ENST00000428843 PDE4DIPQ5VU43 2346 aa24.98■■□□□ 1.59
PTPN18-205ENST00000428843 EVPLQ92817 2033 aa24.98■■□□□ 1.59
PTPN18-205ENST00000428843 ARID2Q68CP9 1835 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms