RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 CORO1CQ9ULV4 474 aaPredicted RBP17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 PCDH11XQ9BZA7 1347 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 PCDH11YQ9BZA8 1340 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 STXBP3O00186 592 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 MAP3K13O43283 966 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 FGGP02679 453 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 GOLGA8HP0CJ92 632 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 KIF5BP33176 963 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 PLTPP55058 493 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 BLMHQ13867 455 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 CCDC26Q8TAB7 109 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 CALML4Q96GE6 196 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 ZMYND12Q9H0C1 365 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 MLXIPLQ9NP71 852 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 FGFR1OP2Q9NVK5 253 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 ADAM22Q9P0K1 906 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 CICQ96RK0 1608 aaPredicted RBP17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 UBR2Q8IWV8 1755 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 CCDC188H7C350 402 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 RGS16O15492 202 aaPredicted RBP17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 SNX3O60493 162 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 POU5F1Q01860 360 aaKnown RBP17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 PRPF4BQ13523 1007 aaKnown RBP17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 SLC29A2Q14542 456 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 SEC14L1Q92503 715 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 LARP4BQ92615 738 aaKnown RBP17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 DDX12PQ92771 950 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 CNKSR1Q969H4 720 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 SLITRK6Q9H5Y7 841 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 FAM114A2Q9NRY5 505 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 ETAA1Q9NY74 926 aa17.85■□□□□ 0.45
RHBDF1-204ENST00000428730 LAD1O00515 517 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 PMS2P54278 862 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 TSG101Q99816 390 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 BRIP1Q9BX63 1249 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 NUCKS1Q9H1E3 243 aaKnown RBP17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 GANQ9H2C0 597 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 ERVK-5Q9HDB9 667 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 SNX24Q9Y343 169 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 POTEMA6NI47 508 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 CCND1P24385 295 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 EIF3BP55884 814 aaKnown RBP17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 DENND2CQ68D51 928 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 FAM43BQ6ZT52 329 aaPredicted RBP17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 PNMA1Q8ND90 353 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 OSBPL1AQ9BXW6 950 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 SH3GLB2Q9NR46 395 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 ZDHHC18Q9NUE0 388 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 AIPL1Q9NZN9 384 aa17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.84■□□□□ 0.45
RHBDF1-204ENST00000428730 ALKBH5Q6P6C2 394 aaKnown RBP17.83■□□□□ 0.45
RHBDF1-204ENST00000428730 SLC17A8Q8NDX2 589 aa17.83■□□□□ 0.45
RHBDF1-204ENST00000428730 FBXO25Q8TCJ0 367 aa17.83■□□□□ 0.45
RHBDF1-204ENST00000428730 NEK9Q8TD19 979 aa17.83■□□□□ 0.45
RHBDF1-204ENST00000428730 NAGPAQ9UK23 515 aa17.83■□□□□ 0.45
RHBDF1-204ENST00000428730 DBR1Q9UK59 544 aaKnown RBP17.83■□□□□ 0.45
RHBDF1-204ENST00000428730 FOXO6A8MYZ6 492 aa17.83■□□□□ 0.44
RHBDF1-204ENST00000428730 SNUPNO95149 360 aaKnown RBP17.83■□□□□ 0.44
RHBDF1-204ENST00000428730 CACNB1Q02641 598 aaPredicted RBP17.83■□□□□ 0.44
RHBDF1-204ENST00000428730 IRF2BP2Q7Z5L9 587 aa17.83■□□□□ 0.44
RHBDF1-204ENST00000428730 SEMA4AQ9H3S1 761 aa17.83■□□□□ 0.44
RHBDF1-204ENST00000428730 COL1A1P02452 1464 aaPredicted RBP17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 ANKRD33BA6NCL7 494 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 ATP2A2P16615 1042 aaKnown RBP17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 SLC9A1P19634 815 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 MSH2P43246 934 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 TUBP50607 506 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 FKBP3Q00688 224 aaKnown RBP17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 TAF11Q15544 211 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 GNPTABQ3T906 1256 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 GALNTL6Q49A17 601 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 ZCWPW2Q504Y3 356 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 OTUD6AQ7L8S5 288 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 RASGEF1CQ8N431 466 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 PABPC3Q9H361 631 aaKnown RBP17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 BARHL2Q9NY43 387 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 MAD2L2Q9UI95 211 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 CREB1P16220 341 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 FGFR4P22455 802 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 COPS2P61201 443 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 ZNF211Q13398 564 aaPredicted RBP17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 MYOCDQ8IZQ8 938 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 PGM2Q96G03 612 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 OSGEPQ9NPF4 335 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 IL17RBQ9NRM6 502 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 ZFATQ9P243 1243 aa17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 NKX1-2Q9UD57 310 aaPredicted RBP17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 ZMYND8Q9ULU4 1186 aaPredicted RBP17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 RTCBQ9Y3I0 505 aaKnown RBP17.82■□□□□ 0.44
RHBDF1-204ENST00000428730 PVALEFA0A1B0GWK0 134 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 A6NHS1 94 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 TCP11X1B4DZS4 312 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 NUDT17P0C025 328 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 KLRC3Q07444 240 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 CNGA2Q16280 664 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 DCAF12L1Q5VU92 463 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 NT5DC3Q86UY8 548 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 CDK5RAP3Q96JB5 506 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 STXBP5LQ9Y2K9 1186 aa17.81■□□□□ 0.44
RHBDF1-204ENST00000428730 USP15Q9Y4E8 981 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms