RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PSMC5P62195 406 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 PRKCEQ02156 737 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 HIC1Q14526 733 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 RETREG2Q8NC44 543 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 ERMNQ8TAM6 284 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 AFAP1L1Q8TED9 768 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 ATP8B4Q8TF62 1192 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 TRIM43Q96BQ3 446 aaPredicted RBP16.34■□□□□ 0.21
SGCE-204ENST00000428696 SH2D3AQ9BRG2 576 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 HIPK3Q9H422 1215 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 PDLIM7Q9NR12 457 aa16.34■□□□□ 0.21
SGCE-204ENST00000428696 NRCAMQ92823 1304 aa16.33■□□□□ 0.21
SGCE-204ENST00000428696 RRN3P2A6NIE6 340 aa16.33■□□□□ 0.2
SGCE-204ENST00000428696 ZNF862O60290 1169 aa16.33■□□□□ 0.2
SGCE-204ENST00000428696 DKC1O60832 514 aaKnown RBP eCLIP16.33■□□□□ 0.2
SGCE-204ENST00000428696 CD4P01730 458 aa16.33■□□□□ 0.2
SGCE-204ENST00000428696 OATP04181 439 aa16.33■□□□□ 0.2
SGCE-204ENST00000428696 MARCKSP29966 332 aaPredicted RBP16.33■□□□□ 0.2
SGCE-204ENST00000428696 CYP2C18P33260 490 aa16.33■□□□□ 0.2
SGCE-204ENST00000428696 CCL23P55773 120 aa16.33■□□□□ 0.2
SGCE-204ENST00000428696 MDM2Q00987 491 aaPredicted RBP16.33■□□□□ 0.2
SGCE-204ENST00000428696 SPIRE1Q08AE8 756 aa16.33■□□□□ 0.2
SGCE-204ENST00000428696 B3GNT9Q6UX72 402 aa16.33■□□□□ 0.2
SGCE-204ENST00000428696 SESTD1Q86VW0 696 aa16.33■□□□□ 0.2
SGCE-204ENST00000428696 LMBR1Q8WVP7 490 aa16.33■□□□□ 0.2
SGCE-204ENST00000428696 FAM167AQ96KS9 214 aa16.33■□□□□ 0.2
SGCE-204ENST00000428696 LXNQ9BS40 222 aa16.33■□□□□ 0.2
SGCE-204ENST00000428696 RBM19Q9Y4C8 960 aaKnown RBP16.33■□□□□ 0.2
SGCE-204ENST00000428696 TMEM150BA6NC51 233 aa16.32■□□□□ 0.2
SGCE-204ENST00000428696 BMP15O95972 392 aa16.32■□□□□ 0.2
SGCE-204ENST00000428696 KLRC1P26715 233 aa16.32■□□□□ 0.2
SGCE-204ENST00000428696 CDC25AP30304 524 aa16.32■□□□□ 0.2
SGCE-204ENST00000428696 THPOP40225 353 aa16.32■□□□□ 0.2
SGCE-204ENST00000428696 CCT6AP40227 531 aaKnown RBP16.32■□□□□ 0.2
SGCE-204ENST00000428696 FXR2P51116 673 aaKnown RBP eCLIP16.32■□□□□ 0.2
SGCE-204ENST00000428696 ATP2C1P98194 919 aaPredicted RBP16.32■□□□□ 0.2
SGCE-204ENST00000428696 STK38Q15208 465 aa16.32■□□□□ 0.2
SGCE-204ENST00000428696 IL17AQ16552 155 aa16.32■□□□□ 0.2
SGCE-204ENST00000428696 MTERF2Q49AM1 385 aa16.32■□□□□ 0.2
SGCE-204ENST00000428696 METTL13Q8N6R0 699 aa16.32■□□□□ 0.2
SGCE-204ENST00000428696 BBXQ8WY36 941 aaPredicted RBP16.32■□□□□ 0.2
SGCE-204ENST00000428696 CCDC43Q96MW1 224 aaKnown RBP16.32■□□□□ 0.2
SGCE-204ENST00000428696 USP28Q96RU2 1077 aa16.32■□□□□ 0.2
SGCE-204ENST00000428696 FAM49AQ9H0Q0 323 aaPredicted RBP16.32■□□□□ 0.2
SGCE-204ENST00000428696 ZSWIM4Q9H7M6 989 aa16.32■□□□□ 0.2
SGCE-204ENST00000428696 TSHZ2Q9NRE2 1034 aa16.32■□□□□ 0.2
SGCE-204ENST00000428696 TUBE1Q9UJT0 475 aa16.32■□□□□ 0.2
SGCE-204ENST00000428696 PP2D1A8MPX8 630 aa16.31■□□□□ 0.2
SGCE-204ENST00000428696 SLITRK3O94933 977 aa16.31■□□□□ 0.2
SGCE-204ENST00000428696 XKR3Q5GH77 459 aa16.31■□□□□ 0.2
SGCE-204ENST00000428696 ZNF484Q5JVG2 852 aa16.31■□□□□ 0.2
SGCE-204ENST00000428696 KRT79Q5XKE5 535 aa16.31■□□□□ 0.2
SGCE-204ENST00000428696 RASSF8Q8NHQ8 419 aa16.31■□□□□ 0.2
SGCE-204ENST00000428696 BADQ92934 168 aa16.31■□□□□ 0.2
SGCE-204ENST00000428696 SUGCTQ9HAC7 445 aa16.31■□□□□ 0.2
SGCE-204ENST00000428696 ZBTB39O15060 712 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 PRPHP41219 470 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 DNM1Q05193 864 aaKnown RBP16.3■□□□□ 0.2
SGCE-204ENST00000428696 PTK7Q13308 1070 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 BFSP2Q13515 415 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 PDIA5Q14554 519 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 TPRNQ4KMQ1 711 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 PLA2G4FQ68DD2 849 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 OTUD6AQ7L8S5 288 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 CATSPER3Q86XQ3 398 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 CCDC155Q8N6L0 562 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 SNX29Q8TEQ0 813 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 CEP170P1Q96L14 293 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 PLIN2Q99541 437 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 WRAP73Q9P2S5 460 aaPredicted RBP16.3■□□□□ 0.2
SGCE-204ENST00000428696 IGSF9BQ9UPX0 1349 aa16.3■□□□□ 0.2
SGCE-204ENST00000428696 KIAA0355O15063 1070 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 MED24O75448 989 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 BRD1O95696 1058 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 TIMP1P01033 207 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 CTSHP09668 335 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 ITGB8P26012 769 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 YWHABP31946 246 aaKnown RBP16.29■□□□□ 0.2
SGCE-204ENST00000428696 XKR9Q5GH70 373 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 MARCH8Q5T0T0 291 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 ARL6IP4Q66PJ3 421 aaKnown RBP16.29■□□□□ 0.2
SGCE-204ENST00000428696 MTHFD1LQ6UB35 978 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 RUFY4Q6ZNE9 571 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 PIGOQ8TEQ8 1089 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 DNAJB3Q8WWF6 145 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 HSD17B14Q9BPX1 270 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 NOC4LQ9BVI4 516 aaKnown RBP16.29■□□□□ 0.2
SGCE-204ENST00000428696 BMP2KQ9NSY1 1161 aaPredicted RBP16.29■□□□□ 0.2
SGCE-204ENST00000428696 TBX21Q9UL17 535 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 ZDHHC9Q9Y397 364 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 UMODL1Q5DID0 1318 aa16.29■□□□□ 0.2
SGCE-204ENST00000428696 UBA7P41226 1012 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 NPEPPSP55786 919 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 NUCB2P80303 420 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 TBC1D8BQ0IIM8 1120 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 TMEM62Q0P6H9 643 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 SPECC1Q5M775 1068 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 HAUS3Q68CZ6 603 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 POTEGQ6S5H5 508 aa16.28■□□□□ 0.2
SGCE-204ENST00000428696 ANO5Q75V66 913 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms