RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 ITGB3BPQ13352 177 aaPredicted RBP19.03■□□□□ 0.64
PRDM5-203ENST00000428209 GPC2Q8N158 579 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 CCDC42Q96M95 316 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 KCND2Q9NZV8 630 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 SAMM50Q9Y512 469 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 FRMPD4Q14CM0 1322 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 CTAGE9A4FU28 777 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 ARHGEF35A5YM69 484 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 EIF3CLB5ME19 914 aaKnown RBP19.03■□□□□ 0.64
PRDM5-203ENST00000428209 NMT1P30419 496 aaKnown RBP19.03■□□□□ 0.64
PRDM5-203ENST00000428209 KCNA1Q09470 495 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 KIAA1328Q86T90 577 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 UBXN4Q92575 508 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 KLRG1Q96E93 195 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 EIF3CQ99613 913 aaKnown RBP19.03■□□□□ 0.64
PRDM5-203ENST00000428209 EDEM3Q9BZQ6 932 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 TRIM10Q9UDY6 481 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 RIPK3Q9Y572 518 aa19.03■□□□□ 0.64
PRDM5-203ENST00000428209 LRRC53A6NM62 1247 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 C19orf81C9J6K1 198 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 P4HBP07237 508 aaKnown RBP19.02■□□□□ 0.64
PRDM5-203ENST00000428209 RPL13P26373 211 aaKnown RBP19.02■□□□□ 0.64
PRDM5-203ENST00000428209 ARHGEF16Q5VV41 709 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 FRMD5Q7Z6J6 570 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 BAP1Q92560 729 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 CRACR2AQ9BSW2 395 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 RNF146Q9NTX7 359 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 ARMCX3Q9UH62 379 aaPredicted RBP19.02■□□□□ 0.64
PRDM5-203ENST00000428209 ASTN1O14525 1302 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 EIF3DO15371 548 aaKnown RBP eCLIP19.02■□□□□ 0.64
PRDM5-203ENST00000428209 NR3C1P04150 777 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 PLEKP08567 350 aaPredicted RBP19.02■□□□□ 0.64
PRDM5-203ENST00000428209 LMNB1P20700 586 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 HIRAP54198 1017 aaPredicted RBP19.02■□□□□ 0.64
PRDM5-203ENST00000428209 PPP2R3AQ06190 1150 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 KCNH2Q12809 1159 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 CCDC122Q5T0U0 273 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 PURBQ96QR8 312 aaKnown RBP19.02■□□□□ 0.64
PRDM5-203ENST00000428209 PDCD2LQ9BRP1 358 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 ZSWIM4Q9H7M6 989 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 PXMP2Q9NR77 195 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 SEL1LQ9UBV2 794 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 ODF2LQ9ULJ1 636 aa19.02■□□□□ 0.64
PRDM5-203ENST00000428209 EFCAB8A8MWE9 144 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 FAM178BQ8IXR5 827 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 C12orf42Q96LP6 360 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 ARID3AQ99856 593 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 LSM14BQ9BX40 385 aaKnown RBP19.01■□□□□ 0.63
PRDM5-203ENST00000428209 TBC1D22BQ9NU19 505 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 ARHGAP20Q9P2F6 1191 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 TFR2Q9UP52 801 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 CLIC2O15247 247 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 DSG3P32926 999 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 ZNF131P52739 623 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 PRKG1Q13976 671 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 BAATQ14032 418 aaPredicted RBP19.01■□□□□ 0.63
PRDM5-203ENST00000428209 COG2Q14746 738 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 ZC2HC1CQ53FD0 456 aaPredicted RBP19.01■□□□□ 0.63
PRDM5-203ENST00000428209 SNRNP48Q6IEG0 339 aaKnown RBP19.01■□□□□ 0.63
PRDM5-203ENST00000428209 NAPGQ99747 312 aaPredicted RBP19.01■□□□□ 0.63
PRDM5-203ENST00000428209 NLRC4Q9NPP4 1024 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 CEP72Q9P209 647 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 PPP2R3BQ9Y5P8 575 aa19.01■□□□□ 0.63
PRDM5-203ENST00000428209 KRT86O43790 486 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 TADA3O75528 432 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 AKAP3O75969 853 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 CYP27A1Q02318 531 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 SPA17Q15506 151 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 SUPT20HL1Q3ZLR7 823 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 ODR4Q5SWX8 454 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 PDXDC1Q6P996 788 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 JAKMIP2Q96AA8 810 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 DEF6Q9H4E7 631 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 TESPA1A2RU30 521 aaPredicted RBP19■□□□□ 0.63
PRDM5-203ENST00000428209 TGFB1I1O43294 461 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 NOL4O94818 638 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 GUCY2CP25092 1073 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 ZNF662Q6ZS27 426 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 ZNF720Q7Z2F6 126 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 REPS2Q8NFH8 660 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 TMOD4Q9NZQ9 345 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 PARP14Q460N5 1801 aa19■□□□□ 0.63
PRDM5-203ENST00000428209 XRCC5P13010 732 aaKnown RBP18.99■□□□□ 0.63
PRDM5-203ENST00000428209 EIF4A3P38919 411 aaKnown RBP18.99■□□□□ 0.63
PRDM5-203ENST00000428209 QARSP47897 775 aaKnown RBP18.99■□□□□ 0.63
PRDM5-203ENST00000428209 OAZ1P54368 228 aa18.99■□□□□ 0.63
PRDM5-203ENST00000428209 POLR2FP61218 127 aaKnown RBP18.99■□□□□ 0.63
PRDM5-203ENST00000428209 PADI6Q6TGC4 694 aa18.99■□□□□ 0.63
PRDM5-203ENST00000428209 STXBP4Q6ZWJ1 553 aa18.99■□□□□ 0.63
PRDM5-203ENST00000428209 GPIHBP1Q8IV16 184 aa18.99■□□□□ 0.63
PRDM5-203ENST00000428209 FIZ1Q96SL8 496 aa18.99■□□□□ 0.63
PRDM5-203ENST00000428209 METTL14Q9HCE5 456 aaKnown RBP18.99■□□□□ 0.63
PRDM5-203ENST00000428209 CDC23Q9UJX2 597 aa18.99■□□□□ 0.63
PRDM5-203ENST00000428209 HIP1RO75146 1068 aa18.99■□□□□ 0.63
PRDM5-203ENST00000428209 EPB41P11171 864 aaKnown RBP18.99■□□□□ 0.63
PRDM5-203ENST00000428209 TUBB2AQ13885 445 aa18.99■□□□□ 0.63
PRDM5-203ENST00000428209 KSR1Q8IVT5 923 aa18.99■□□□□ 0.63
PRDM5-203ENST00000428209 TUBB2BQ9BVA1 445 aa18.99■□□□□ 0.63
PRDM5-203ENST00000428209 LACRTQ9GZZ8 138 aa18.99■□□□□ 0.63
PRDM5-203ENST00000428209 NUCKS1Q9H1E3 243 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms