RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PCDHA2Q9Y5H9 948 aa20.87■□□□□ 0.93
GPC1-205ENST00000427506 PCDHA10Q9Y5I2 948 aa20.87■□□□□ 0.93
GPC1-205ENST00000427506 MSH4O15457 936 aa20.86■□□□□ 0.93
GPC1-205ENST00000427506 UPP2O95045 317 aa20.86■□□□□ 0.93
GPC1-205ENST00000427506 MTHFD1LQ6UB35 978 aa20.86■□□□□ 0.93
GPC1-205ENST00000427506 TRMT1LQ7Z2T5 733 aaKnown RBP20.86■□□□□ 0.93
GPC1-205ENST00000427506 MICALL1Q8N3F8 863 aa20.86■□□□□ 0.93
GPC1-205ENST00000427506 LENG9Q96B70 501 aa20.86■□□□□ 0.93
GPC1-205ENST00000427506 INSL6Q9Y581 213 aa20.86■□□□□ 0.93
GPC1-205ENST00000427506 STK36Q9NRP7 1315 aa20.85■□□□□ 0.93
GPC1-205ENST00000427506 SMIM35A0A1B0GVV1 85 aa20.85■□□□□ 0.93
GPC1-205ENST00000427506 GTPBP6O43824 516 aaPredicted RBP20.85■□□□□ 0.93
GPC1-205ENST00000427506 GAS7O60861 476 aa20.85■□□□□ 0.93
GPC1-205ENST00000427506 DTNBO60941 627 aa20.85■□□□□ 0.93
GPC1-205ENST00000427506 SEC24BO95487 1268 aa20.85■□□□□ 0.93
GPC1-205ENST00000427506 KLRC1P26715 233 aa20.85■□□□□ 0.93
GPC1-205ENST00000427506 NEK4P51957 841 aa20.85■□□□□ 0.93
GPC1-205ENST00000427506 TMEM62Q0P6H9 643 aa20.85■□□□□ 0.93
GPC1-205ENST00000427506 MKRN4PQ13434 485 aaPredicted RBP20.85■□□□□ 0.93
GPC1-205ENST00000427506 LPIN1Q14693 890 aa20.85■□□□□ 0.93
GPC1-205ENST00000427506 NONOQ15233 471 aaKnown RBP eCLIP20.85■□□□□ 0.93
GPC1-205ENST00000427506 KRT25Q7Z3Z0 450 aa20.85■□□□□ 0.93
GPC1-205ENST00000427506 GABBR1Q9UBS5 961 aa20.85■□□□□ 0.93
GPC1-205ENST00000427506 PTPRSQ13332 1948 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 WDR64B1ANS9 1081 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 CHMP2AO43633 222 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 EDIL3O43854 480 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 ZNF484Q5JVG2 852 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 FBXO47Q5MNV8 452 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 LRCH2Q5VUJ6 765 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 TSHZ1Q6ZSZ6 1077 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 NECAB1Q8N987 351 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 BBXQ8WY36 941 aaPredicted RBP20.84■□□□□ 0.93
GPC1-205ENST00000427506 WASF1Q92558 559 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 RIT2Q99578 217 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 PHF20Q9BVI0 1012 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 TEKT3Q9BXF9 490 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 ORC3Q9UBD5 711 aaPredicted RBP20.84■□□□□ 0.93
GPC1-205ENST00000427506 MTUS1Q9ULD2 1270 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 MAFBQ9Y5Q3 323 aaPredicted RBP20.84■□□□□ 0.93
GPC1-205ENST00000427506 TRPV2Q9Y5S1 764 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 COL1A2P08123 1366 aa20.84■□□□□ 0.93
GPC1-205ENST00000427506 CCDC194A0A1B0GVG4 234 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.83■□□□□ 0.93
GPC1-205ENST00000427506 LINC01553A4QN01 128 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 EPOPA6NHQ4 379 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 M0R2N6 131 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 TDP2O95551 362 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 ATP4AP20648 1035 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 NPY5RQ15761 445 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 Q4G0T1 1027 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 SPRED2Q7Z698 418 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 NME8Q8N427 588 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 SLC5A5Q92911 643 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 TOP1MTQ969P6 601 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 IL17RAQ96F46 866 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 TGS1Q96RS0 853 aaKnown RBP20.83■□□□□ 0.93
GPC1-205ENST00000427506 YME1L1Q96TA2 773 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 DISC1Q9NRI5 854 aa20.83■□□□□ 0.93
GPC1-205ENST00000427506 CDH23Q9H251 3354 aa20.82■□□□□ 0.92
GPC1-205ENST00000427506 CTDNEP1O95476 244 aa20.82■□□□□ 0.92
GPC1-205ENST00000427506 CD52P31358 61 aa20.82■□□□□ 0.92
GPC1-205ENST00000427506 ME3Q16798 604 aa20.82■□□□□ 0.92
GPC1-205ENST00000427506 INF2Q27J81 1249 aa20.82■□□□□ 0.92
GPC1-205ENST00000427506 GJA10Q969M2 543 aa20.82■□□□□ 0.92
GPC1-205ENST00000427506 CELF4Q9BZC1 486 aaKnown RBP20.82■□□□□ 0.92
GPC1-205ENST00000427506 CHD9Q3L8U1 2897 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 CYP3A7-CYP3A51PA0A087WV96 503 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 CYP3A7P24462 503 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 SFNP31947 248 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 JAK3P52333 1124 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 HTRA4P83105 476 aaPredicted RBP20.81■□□□□ 0.92
GPC1-205ENST00000427506 LETM2Q2VYF4 491 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 GTF3C6Q969F1 213 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 FAM167AQ96KS9 214 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 TSPYL2Q9H2G4 693 aaPredicted RBP20.81■□□□□ 0.92
GPC1-205ENST00000427506 UNC45AQ9H3U1 944 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 PRDM6Q9NQX0 595 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 GJB4Q9NTQ9 266 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 DDX25Q9UHL0 483 aaKnown RBP20.81■□□□□ 0.92
GPC1-205ENST00000427506 CEP131Q9UPN4 1083 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 GINS2Q9Y248 185 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 SQORQ9Y6N5 450 aa20.81■□□□□ 0.92
GPC1-205ENST00000427506 MICAL3Q7RTP6 2002 aa20.8■□□□□ 0.92
GPC1-205ENST00000427506 LARGE1O95461 756 aa20.8■□□□□ 0.92
GPC1-205ENST00000427506 ERVK-21P61565 698 aa20.8■□□□□ 0.92
GPC1-205ENST00000427506 GRB10Q13322 594 aa20.8■□□□□ 0.92
GPC1-205ENST00000427506 SKIV2LQ15477 1246 aaKnown RBP20.8■□□□□ 0.92
GPC1-205ENST00000427506 MOXD1Q6UVY6 613 aa20.8■□□□□ 0.92
GPC1-205ENST00000427506 MIER3Q7Z3K6 550 aa20.8■□□□□ 0.92
GPC1-205ENST00000427506 METTL13Q8N6R0 699 aa20.8■□□□□ 0.92
GPC1-205ENST00000427506 AGO3Q9H9G7 860 aaKnown RBP20.8■□□□□ 0.92
GPC1-205ENST00000427506 NRBP2Q9NSY0 501 aa20.8■□□□□ 0.92
GPC1-205ENST00000427506 MTCH2Q9Y6C9 303 aa20.8■□□□□ 0.92
GPC1-205ENST00000427506 IGSF9BQ9UPX0 1349 aa20.79■□□□□ 0.92
GPC1-205ENST00000427506 ZBTB42B2RXF5 422 aa20.79■□□□□ 0.92
GPC1-205ENST00000427506 ENPP3O14638 875 aa20.79■□□□□ 0.92
GPC1-205ENST00000427506 PSMD10O75832 226 aa20.79■□□□□ 0.92
GPC1-205ENST00000427506 POU3F3P20264 500 aaPredicted RBP20.79■□□□□ 0.92
GPC1-205ENST00000427506 PAK2Q13177 524 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms