RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 TRAF5O00463 557 aa29.42■■■□□ 2.3
SH3GL3-202ENST00000427482 ARHGAP6O43182 974 aa29.42■■■□□ 2.3
SH3GL3-202ENST00000427482 MYBP10242 640 aa29.42■■■□□ 2.3
SH3GL3-202ENST00000427482 GJA5P36382 358 aa29.42■■■□□ 2.3
SH3GL3-202ENST00000427482 ZNF131P52739 623 aa29.42■■■□□ 2.3
SH3GL3-202ENST00000427482 CPLX3Q8WVH0 158 aa29.42■■■□□ 2.3
SH3GL3-202ENST00000427482 PAGR1Q9BTK6 254 aa29.42■■■□□ 2.3
SH3GL3-202ENST00000427482 MRPL44Q9H9J2 332 aaKnown RBP29.42■■■□□ 2.3
SH3GL3-202ENST00000427482 ASTN1O14525 1302 aa29.42■■■□□ 2.3
SH3GL3-202ENST00000427482 LRRC37A2A6NM11 1700 aa29.42■■■□□ 2.3
SH3GL3-202ENST00000427482 NKRFO15226 690 aaKnown RBP eCLIP29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 FXR1P51114 621 aaKnown RBP eCLIP29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 EDRF1Q3B7T1 1238 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 GPAT2Q6NUI2 795 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 CCDC51Q96ER9 411 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 MOV10L1Q9BXT6 1211 aaKnown RBP29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 BCAS3Q9H6U6 928 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 PARVGQ9HBI0 331 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 POLD4Q9HCU8 107 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 SEL1LQ9UBV2 794 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 NFASCO94856 1347 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 HOXD13P35453 343 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 CNTN2Q02246 1040 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 MAN2A1Q16706 1144 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 UGCGQ16739 394 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 KNOP1Q1ED39 458 aaKnown RBP29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 GNPTABQ3T906 1256 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 MAP1SQ66K74 1059 aaPredicted RBP29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 NCAPG2Q86XI2 1143 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 C4orf19Q8IY42 314 aa29.41■■■□□ 2.3
SH3GL3-202ENST00000427482 UNCXA6NJT0 531 aa29.4■■■□□ 2.3
SH3GL3-202ENST00000427482 SFI1A8K8P3 1242 aa29.4■■■□□ 2.3
SH3GL3-202ENST00000427482 OSBPP22059 807 aa29.4■■■□□ 2.3
SH3GL3-202ENST00000427482 PSMC5P62195 406 aa29.4■■■□□ 2.3
SH3GL3-202ENST00000427482 PADI6Q6TGC4 694 aa29.4■■■□□ 2.3
SH3GL3-202ENST00000427482 MYCT1Q8N699 235 aa29.4■■■□□ 2.3
SH3GL3-202ENST00000427482 TRAF3IP3Q9Y228 551 aa29.4■■■□□ 2.3
SH3GL3-202ENST00000427482 ARID2Q68CP9 1835 aa29.39■■■□□ 2.3
SH3GL3-202ENST00000427482 SPATA31C2B4DYI2 1134 aa29.39■■■□□ 2.3
SH3GL3-202ENST00000427482 PRPF6O94906 941 aaKnown RBP29.39■■■□□ 2.3
SH3GL3-202ENST00000427482 ALDH5A1P51649 535 aaPredicted RBP29.39■■■□□ 2.3
SH3GL3-202ENST00000427482 TBC1D8BQ0IIM8 1120 aa29.39■■■□□ 2.3
SH3GL3-202ENST00000427482 VWA3BQ502W6 1294 aa29.39■■■□□ 2.3
SH3GL3-202ENST00000427482 TRMT1Q9NXH9 659 aaKnown RBP29.39■■■□□ 2.3
SH3GL3-202ENST00000427482 EIF3DO15371 548 aaKnown RBP eCLIP29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 GCNT3O95395 438 aa29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 RARRES1P49788 294 aa29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 SNAPC2Q13487 334 aa29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 STXBP2Q15833 593 aa29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 SLC10A4Q96EP9 437 aa29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 C16orf45Q96MC5 204 aaPredicted RBP29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 NAA15Q9BXJ9 866 aaKnown RBP29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 GNA14O95837 355 aa29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 SLC25A27O95847 323 aa29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 YWHABP31946 246 aaKnown RBP29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 FKBP15Q5T1M5 1219 aa29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 SMAP1Q8IYB5 467 aaPredicted RBP29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 ERGIC2Q96RQ1 377 aa29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 PCDHA10Q9Y5I2 948 aa29.38■■■□□ 2.29
SH3GL3-202ENST00000427482 PDXKO00764 312 aa29.37■■■□□ 2.29
SH3GL3-202ENST00000427482 EIF3JO75822 258 aaKnown RBP29.37■■■□□ 2.29
SH3GL3-202ENST00000427482 FECHP22830 423 aa29.37■■■□□ 2.29
SH3GL3-202ENST00000427482 COPB2P35606 906 aa29.37■■■□□ 2.29
SH3GL3-202ENST00000427482 MARSP56192 900 aaKnown RBP29.37■■■□□ 2.29
SH3GL3-202ENST00000427482 MAPK7Q13164 816 aa29.37■■■□□ 2.29
SH3GL3-202ENST00000427482 FIZ1Q96SL8 496 aa29.37■■■□□ 2.29
SH3GL3-202ENST00000427482 NDST4Q9H3R1 872 aa29.37■■■□□ 2.29
SH3GL3-202ENST00000427482 ZNF408Q9H9D4 720 aa29.37■■■□□ 2.29
SH3GL3-202ENST00000427482 TXNRD2Q9NNW7 524 aa29.37■■■□□ 2.29
SH3GL3-202ENST00000427482 RBPJLQ9UBG7 517 aa29.37■■■□□ 2.29
SH3GL3-202ENST00000427482 POTEB2H3BUK9 544 aa29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 HIP1RO75146 1068 aa29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 ERCC3P19447 782 aa29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 ICAM3P32942 547 aa29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 NYAP1Q6ZVC0 841 aa29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 PPP1R13BQ96KQ4 1090 aa29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 JPH1Q9HDC5 661 aaPredicted RBP29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 R3HCC1Q9Y3T6 440 aaKnown RBP29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 UBE4BO95155 1302 aa29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 MYH9P35579 1960 aaKnown RBP29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 RNF225M0QZC1 329 aaPredicted RBP29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 NMT1P30419 496 aaKnown RBP29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 SYCP1Q15431 976 aa29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 CCDC40Q4G0X9 1142 aa29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 DAW1Q8N136 415 aa29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 FAM133AQ8N9E0 248 aa29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 ANKEF1Q9NU02 776 aa29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 TYW1Q9NV66 732 aaKnown RBP29.36■■■□□ 2.29
SH3GL3-202ENST00000427482 ZNFX1Q9P2E3 1918 aaKnown RBP29.35■■■□□ 2.29
SH3GL3-202ENST00000427482 SOWAHBA6NEL2 793 aa29.35■■■□□ 2.29
SH3GL3-202ENST00000427482 CCP110O43303 1012 aa29.35■■■□□ 2.29
SH3GL3-202ENST00000427482 CALUO43852 315 aaPredicted RBP29.35■■■□□ 2.29
SH3GL3-202ENST00000427482 EDNRBP24530 442 aa29.35■■■□□ 2.29
SH3GL3-202ENST00000427482 FSTL1Q12841 308 aa29.35■■■□□ 2.29
SH3GL3-202ENST00000427482 ABHD10Q9NUJ1 306 aa29.35■■■□□ 2.29
SH3GL3-202ENST00000427482 SLC9A2Q9UBY0 812 aa29.35■■■□□ 2.29
SH3GL3-202ENST00000427482 ADAM9Q13443 819 aa29.34■■■□□ 2.29
SH3GL3-202ENST00000427482 FAM178BQ8IXR5 827 aa29.34■■■□□ 2.29
SH3GL3-202ENST00000427482 NUP58Q9BVL2 599 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms