RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 ERMNQ8TAM6 284 aa12.78□□□□□ -0.36
FIRRE-201ENST00000427391 BCS1LQ9Y276 419 aa12.78□□□□□ -0.36
FIRRE-201ENST00000427391 RABGAP1Q9Y3P9 1069 aa12.78□□□□□ -0.36
FIRRE-201ENST00000427391 ASTN1O14525 1302 aa12.78□□□□□ -0.36
FIRRE-201ENST00000427391 DDX39AO00148 427 aaKnown RBP12.78□□□□□ -0.36
FIRRE-201ENST00000427391 PALMO75781 387 aa12.78□□□□□ -0.36
FIRRE-201ENST00000427391 SERPING1P05155 500 aa12.78□□□□□ -0.36
FIRRE-201ENST00000427391 KLHL30Q0D2K2 578 aa12.78□□□□□ -0.36
FIRRE-201ENST00000427391 STYK1Q6J9G0 422 aa12.78□□□□□ -0.36
FIRRE-201ENST00000427391 SPATA4Q8NEY3 305 aa12.78□□□□□ -0.36
FIRRE-201ENST00000427391 ZNF277Q9NRM2 450 aaPredicted RBP12.78□□□□□ -0.36
FIRRE-201ENST00000427391 ARMCX3Q9UH62 379 aaPredicted RBP12.78□□□□□ -0.36
FIRRE-201ENST00000427391 PITPNM2Q9BZ72 1349 aa12.77□□□□□ -0.36
FIRRE-201ENST00000427391 MAPK8IP2Q13387 824 aaPredicted RBP12.77□□□□□ -0.36
FIRRE-201ENST00000427391 DGKZQ13574 1117 aa12.77□□□□□ -0.36
FIRRE-201ENST00000427391 MOXD1Q6UVY6 613 aa12.77□□□□□ -0.36
FIRRE-201ENST00000427391 EPM2AIP1Q7L775 607 aaPredicted RBP12.77□□□□□ -0.36
FIRRE-201ENST00000427391 IQCDQ96DY2 449 aa12.77□□□□□ -0.36
FIRRE-201ENST00000427391 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.77□□□□□ -0.36
FIRRE-201ENST00000427391 ZNF646O15015 1829 aaPredicted RBP12.77□□□□□ -0.37
FIRRE-201ENST00000427391 ATRNL1Q5VV63 1379 aa12.77□□□□□ -0.37
FIRRE-201ENST00000427391 ENTPD3O75355 529 aa12.77□□□□□ -0.37
FIRRE-201ENST00000427391 MMP14P50281 582 aa12.77□□□□□ -0.37
FIRRE-201ENST00000427391 PTK2Q05397 1052 aa12.77□□□□□ -0.37
FIRRE-201ENST00000427391 KIAA0753Q2KHM9 967 aa12.77□□□□□ -0.37
FIRRE-201ENST00000427391 RINT1Q6NUQ1 792 aa12.77□□□□□ -0.37
FIRRE-201ENST00000427391 DPY19L2P1Q6NXN4 242 aa12.77□□□□□ -0.37
FIRRE-201ENST00000427391 MAEAQ7L5Y9 396 aa12.77□□□□□ -0.37
FIRRE-201ENST00000427391 RBM46Q8TBY0 533 aaKnown RBP12.77□□□□□ -0.37
FIRRE-201ENST00000427391 FAM20AQ96MK3 541 aa12.77□□□□□ -0.37
FIRRE-201ENST00000427391 TRERF1Q96PN7 1200 aa12.77□□□□□ -0.37
FIRRE-201ENST00000427391 ALS2CR12Q96Q35 445 aa12.77□□□□□ -0.37
FIRRE-201ENST00000427391 SH2D3AQ9BRG2 576 aa12.77□□□□□ -0.37
FIRRE-201ENST00000427391 RBM12Q9NTZ6 932 aaKnown RBP12.77□□□□□ -0.37
FIRRE-201ENST00000427391 SSU72P8A0A1W2PR75 194 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 ZSCAN5CA6NGD5 496 aaPredicted RBP12.76□□□□□ -0.37
FIRRE-201ENST00000427391 SPDYE2BA6NHP3 402 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 TBCAO75347 108 aaKnown RBP12.76□□□□□ -0.37
FIRRE-201ENST00000427391 SLITRK3O94933 977 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 FOSP01100 380 aaPredicted RBP12.76□□□□□ -0.37
FIRRE-201ENST00000427391 NR3C1P04150 777 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 SPDYE6P0CI01 402 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 ARP10275 920 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 HNRNPH2P55795 449 aaKnown RBP12.76□□□□□ -0.37
FIRRE-201ENST00000427391 MARSP56192 900 aaKnown RBP12.76□□□□□ -0.37
FIRRE-201ENST00000427391 PLS1Q14651 629 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 LRCH2Q5VUJ6 765 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 BTNL9Q6UXG8 535 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 NOX5Q96PH1 765 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 GBP3Q9H0R5 595 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 HYOU1Q9Y4L1 999 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 SHTN1A0MZ66 631 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 TBX3O15119 743 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 PJA2O43164 708 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 TGFB1I1O43294 461 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 GNA14O95837 355 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 PON1P27169 355 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 CIITAP33076 1130 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 FKBP1AP62942 108 aaKnown RBP12.76□□□□□ -0.37
FIRRE-201ENST00000427391 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
FIRRE-201ENST00000427391 ASIC2Q16515 512 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 EDRF1Q3B7T1 1238 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 CCDC181Q5TID7 509 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 OTOP1Q7RTM1 612 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 ZNF571Q7Z3V5 609 aaPredicted RBP12.76□□□□□ -0.37
FIRRE-201ENST00000427391 MYCT1Q8N699 235 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 BANK1Q8NDB2 785 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 ZNF70Q9UC06 446 aaPredicted RBP12.76□□□□□ -0.37
FIRRE-201ENST00000427391 ZBTB21Q9ULJ3 1066 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 HPCAL4Q9UM19 191 aa12.76□□□□□ -0.37
FIRRE-201ENST00000427391 UCHL3P15374 230 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 TUBB4BP68371 445 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 CCNI2Q6ZMN8 369 aaPredicted RBP12.75□□□□□ -0.37
FIRRE-201ENST00000427391 ZC3H3Q8IXZ2 948 aaKnown RBP12.75□□□□□ -0.37
FIRRE-201ENST00000427391 FLAD1Q8NFF5 587 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 CNKSR1Q969H4 720 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 HSD17B14Q9BPX1 270 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 SELENOOQ9BVL4 669 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 TRAF3IP3Q9Y228 551 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
FIRRE-201ENST00000427391 ESYT3A0FGR9 886 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 EIF3JO75822 258 aaKnown RBP12.75□□□□□ -0.37
FIRRE-201ENST00000427391 EYA4O95677 639 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 AFPP02771 609 aaKnown RBP12.75□□□□□ -0.37
FIRRE-201ENST00000427391 SLC18A3Q16572 532 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 EXOC3L4Q17RC7 722 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 TBC1D10BQ4KMP7 808 aaPredicted RBP12.75□□□□□ -0.37
FIRRE-201ENST00000427391 FOXR2Q6PJQ5 311 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 PROCA1Q8NCQ7 364 aaPredicted RBP12.75□□□□□ -0.37
FIRRE-201ENST00000427391 SPAG5Q96R06 1193 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 EDEM3Q9BZQ6 932 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 RBAK-RBAKDNI3L0D1 243 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 NPM3O75607 178 aaKnown RBP12.75□□□□□ -0.37
FIRRE-201ENST00000427391 ZBTB7AO95365 584 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 SYF2O95926 243 aaKnown RBP12.75□□□□□ -0.37
FIRRE-201ENST00000427391 XRCC5P13010 732 aaKnown RBP12.75□□□□□ -0.37
FIRRE-201ENST00000427391 BAG6P46379 1132 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 IRF2BP2Q7Z5L9 587 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 SLC35C1Q96A29 364 aa12.75□□□□□ -0.37
FIRRE-201ENST00000427391 AGBL1Q96MI9 1066 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms