RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 RSBN1LQ6PCB5 846 aaPredicted RBP14.67□□□□□ -0.06
USP42-203ENST00000426246 CCDC65Q8IXS2 484 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 DNAJC7Q99615 494 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 MYO1AQ9UBC5 1043 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 COL4A3BPQ9Y5P4 624 aa14.67□□□□□ -0.06
USP42-203ENST00000426246 SPDYE3A6NKU9 549 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 PSMD14O00487 310 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 PDHBP11177 359 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 ZNF746Q6NUN9 644 aaPredicted RBP14.66□□□□□ -0.06
USP42-203ENST00000426246 MYCT1Q8N699 235 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 ZNF507Q8TCN5 953 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 CELF4Q9BZC1 486 aaKnown RBP14.66□□□□□ -0.06
USP42-203ENST00000426246 LUC7LQ9NQ29 371 aaKnown RBP14.66□□□□□ -0.06
USP42-203ENST00000426246 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.66□□□□□ -0.06
USP42-203ENST00000426246 CAPN7Q9Y6W3 813 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 RASSF10A6NK89 507 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 MCM3P25205 808 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 GTF2A1P52655 376 aaPredicted RBP14.66□□□□□ -0.06
USP42-203ENST00000426246 FKBP3Q00688 224 aaKnown RBP14.66□□□□□ -0.06
USP42-203ENST00000426246 RPS6KA1Q15418 735 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 CUL5Q93034 780 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 SELENOSQ9BQE4 189 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 CCSER1Q9C0I3 900 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 BLOC1S4Q9NUP1 217 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 STIM2Q9P246 746 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 SWAP70Q9UH65 585 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 ITIH6Q6UXX5 1313 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 LRRC10BA6NIK2 292 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 SNHG28P0DPA3 235 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 PTGER2P43116 358 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 KCNH2Q12809 1159 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 RETREG2Q8NC44 543 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 PNMA5Q96PV4 448 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 FAM53CQ9NYF3 392 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 PIM2Q9P1W9 311 aa14.66□□□□□ -0.06
USP42-203ENST00000426246 PPP1R1BQ9UD71 204 aaPredicted RBP14.66□□□□□ -0.06
USP42-203ENST00000426246 M0R2N6 131 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 TRIM49P0CI25 452 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 TRIM49CP0CI26 452 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 IFT88Q13099 833 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 PEX26Q7Z412 305 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 SFR1Q86XK3 245 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 CPXCR1Q8N123 301 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 CTNNBL1Q8WYA6 563 aaPredicted RBP14.65□□□□□ -0.06
USP42-203ENST00000426246 MED4Q9NPJ6 270 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 TCEAL9Q9UHQ7 104 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 CASP4P49662 377 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 ZC2HC1CQ53FD0 456 aaPredicted RBP14.65□□□□□ -0.06
USP42-203ENST00000426246 OTUD6BQ8N6M0 293 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 MGARPQ8TDB4 240 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 SH2D4AQ9H788 454 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 ARMCX3Q9UH62 379 aaPredicted RBP14.65□□□□□ -0.06
USP42-203ENST00000426246 AMACRQ9UHK6 382 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 FAM184BQ9ULE4 1060 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 CLRN2A0PK11 232 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 RAD17O75943 681 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 CASP5P51878 434 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 TATDN1Q6P1N9 297 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 RAD54LQ92698 747 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 ZIM3Q96PE6 472 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 TDRD3Q9H7E2 651 aaKnown RBP14.65□□□□□ -0.06
USP42-203ENST00000426246 RAB21Q9UL25 225 aa14.65□□□□□ -0.06
USP42-203ENST00000426246 KRIT1O00522 736 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 HLA-DOAP06340 250 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 TMOD1P28289 359 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 SEPT2Q15019 361 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 R3HDM1Q15032 1099 aaKnown RBP14.64□□□□□ -0.07
USP42-203ENST00000426246 UNC13DQ70J99 1090 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 CEP57Q86XR8 500 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 ZMYND12Q9H0C1 365 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 MLXIPLQ9NP71 852 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 GGT7Q9UJ14 662 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 PTPN22Q9Y2R2 807 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 NFKBIEO00221 500 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 SSTR3P32745 418 aaPredicted RBP14.64□□□□□ -0.07
USP42-203ENST00000426246 IFNAR2P48551 515 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 CREG2Q8IUH2 290 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 ADAM33Q9BZ11 813 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 TSGA10Q9BZW7 698 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 VEZTQ9HBM0 779 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 SPDYE2BA6NHP3 402 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 SPDYE6P0CI01 402 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 MYBP10242 640 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 CTNNA1P35221 906 aaKnown RBP14.64□□□□□ -0.07
USP42-203ENST00000426246 LARGE2Q8N3Y3 721 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 FAM84AQ96KN4 292 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 DHX36Q9H2U1 1008 aaKnown RBP14.64□□□□□ -0.07
USP42-203ENST00000426246 ATP8A1Q9Y2Q0 1164 aa14.64□□□□□ -0.07
USP42-203ENST00000426246 ZBTB12Q9Y330 459 aaPredicted RBP14.64□□□□□ -0.07
USP42-203ENST00000426246 A0A1W2PQC6 194 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 OPA1O60313 960 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 FAM13AO94988 1023 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 IRAK1P51617 712 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 PRELPP51888 382 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 RBM26Q5T8P6 1007 aaKnown RBP14.63□□□□□ -0.07
USP42-203ENST00000426246 IFT20Q8IY31 132 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 CCDC170Q8IYT3 715 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 CEP89Q96ST8 783 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 SPZ1Q9BXG8 430 aa14.63□□□□□ -0.07
USP42-203ENST00000426246 HDAC9Q9UKV0 1011 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms