RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 MARCH8Q5T0T0 291 aa25.2■■□□□ 1.62
PTCHD3P2-201ENST00000424937 TAF2Q6P1X5 1199 aa25.2■■□□□ 1.62
PTCHD3P2-201ENST00000424937 ZBTB10Q96DT7 871 aa25.2■■□□□ 1.62
PTCHD3P2-201ENST00000424937 KCNMB3Q9NPA1 279 aa25.2■■□□□ 1.62
PTCHD3P2-201ENST00000424937 MAFBQ9Y5Q3 323 aaPredicted RBP25.2■■□□□ 1.62
PTCHD3P2-201ENST00000424937 HBP1O60381 514 aa25.19■■□□□ 1.62
PTCHD3P2-201ENST00000424937 MBTPS1Q14703 1052 aa25.19■■□□□ 1.62
PTCHD3P2-201ENST00000424937 FAM109BQ6ICB4 259 aaPredicted RBP25.19■■□□□ 1.62
PTCHD3P2-201ENST00000424937 TRMT1LQ7Z2T5 733 aaKnown RBP25.19■■□□□ 1.62
PTCHD3P2-201ENST00000424937 MIER3Q7Z3K6 550 aa25.19■■□□□ 1.62
PTCHD3P2-201ENST00000424937 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.18■■□□□ 1.62
PTCHD3P2-201ENST00000424937 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.18■■□□□ 1.62
PTCHD3P2-201ENST00000424937 RBAK-RBAKDNI3L0D1 243 aa25.18■■□□□ 1.62
PTCHD3P2-201ENST00000424937 MARCH6O60337 910 aa25.18■■□□□ 1.62
PTCHD3P2-201ENST00000424937 CXCL10P02778 98 aa25.18■■□□□ 1.62
PTCHD3P2-201ENST00000424937 ATP4AP20648 1035 aa25.18■■□□□ 1.62
PTCHD3P2-201ENST00000424937 GPR153Q6NV75 609 aa25.18■■□□□ 1.62
PTCHD3P2-201ENST00000424937 FBXO18Q8NFZ0 1043 aa25.18■■□□□ 1.62
PTCHD3P2-201ENST00000424937 SLC4A7Q9Y6M7 1214 aa25.18■■□□□ 1.62
PTCHD3P2-201ENST00000424937 COL1A2P08123 1366 aa25.18■■□□□ 1.62
PTCHD3P2-201ENST00000424937 SLC34A2O95436 690 aa25.17■■□□□ 1.62
PTCHD3P2-201ENST00000424937 GNL2Q13823 731 aaKnown RBP25.17■■□□□ 1.62
PTCHD3P2-201ENST00000424937 UGCGQ16739 394 aa25.17■■□□□ 1.62
PTCHD3P2-201ENST00000424937 RSPH3Q86UC2 560 aa25.17■■□□□ 1.62
PTCHD3P2-201ENST00000424937 RDM1Q8NG50 284 aa25.17■■□□□ 1.62
PTCHD3P2-201ENST00000424937 DNAJB3Q8WWF6 145 aa25.17■■□□□ 1.62
PTCHD3P2-201ENST00000424937 FAM20AQ96MK3 541 aa25.17■■□□□ 1.62
PTCHD3P2-201ENST00000424937 FAM49AQ9H0Q0 323 aaPredicted RBP25.17■■□□□ 1.62
PTCHD3P2-201ENST00000424937 KIF3AQ9Y496 699 aa25.17■■□□□ 1.62
PTCHD3P2-201ENST00000424937 GRXCR1A8MXD5 290 aa25.16■■□□□ 1.62
PTCHD3P2-201ENST00000424937 WNT7AO00755 349 aa25.16■■□□□ 1.62
PTCHD3P2-201ENST00000424937 TBX3O15119 743 aa25.16■■□□□ 1.62
PTCHD3P2-201ENST00000424937 PRKCEQ02156 737 aa25.16■■□□□ 1.62
PTCHD3P2-201ENST00000424937 CNKSR3Q6P9H4 555 aa25.16■■□□□ 1.62
PTCHD3P2-201ENST00000424937 B3GNT9Q6UX72 402 aa25.16■■□□□ 1.62
PTCHD3P2-201ENST00000424937 Q7L0L9 218 aa25.16■■□□□ 1.62
PTCHD3P2-201ENST00000424937 BBXQ8WY36 941 aaPredicted RBP25.16■■□□□ 1.62
PTCHD3P2-201ENST00000424937 FAM167AQ96KS9 214 aa25.16■■□□□ 1.62
PTCHD3P2-201ENST00000424937 FOXP1Q9H334 677 aaPredicted RBP25.16■■□□□ 1.62
PTCHD3P2-201ENST00000424937 VAV3Q9UKW4 847 aa25.16■■□□□ 1.62
PTCHD3P2-201ENST00000424937 BAIAP3O94812 1187 aa25.15■■□□□ 1.62
PTCHD3P2-201ENST00000424937 ZNF484Q5JVG2 852 aa25.15■■□□□ 1.62
PTCHD3P2-201ENST00000424937 MTHFD1LQ6UB35 978 aa25.15■■□□□ 1.62
PTCHD3P2-201ENST00000424937 RPAINQ86UA6 219 aa25.15■■□□□ 1.62
PTCHD3P2-201ENST00000424937 HAS1Q92839 578 aa25.15■■□□□ 1.62
PTCHD3P2-201ENST00000424937 ZNF862O60290 1169 aa25.14■■□□□ 1.62
PTCHD3P2-201ENST00000424937 NEMFO60524 1076 aa25.14■■□□□ 1.62
PTCHD3P2-201ENST00000424937 BAG4O95429 457 aaKnown RBP25.14■■□□□ 1.62
PTCHD3P2-201ENST00000424937 OATP04181 439 aa25.14■■□□□ 1.62
PTCHD3P2-201ENST00000424937 ATP2B1P20020 1258 aa25.14■■□□□ 1.62
PTCHD3P2-201ENST00000424937 GJB2P29033 226 aa25.14■■□□□ 1.62
PTCHD3P2-201ENST00000424937 PPP2R5CQ13362 524 aa25.14■■□□□ 1.62
PTCHD3P2-201ENST00000424937 CALCRLQ16602 461 aa25.14■■□□□ 1.62
PTCHD3P2-201ENST00000424937 TCTN1Q2MV58 587 aa25.14■■□□□ 1.62
PTCHD3P2-201ENST00000424937 FAM26DQ5JW98 314 aa25.14■■□□□ 1.62
PTCHD3P2-201ENST00000424937 SLFN12Q8IYM2 578 aa25.14■■□□□ 1.62
PTCHD3P2-201ENST00000424937 DEFB123Q8N688 67 aa25.14■■□□□ 1.62
PTCHD3P2-201ENST00000424937 PCDHA2Q9Y5H9 948 aa25.14■■□□□ 1.62
PTCHD3P2-201ENST00000424937 ARID2Q68CP9 1835 aa25.14■■□□□ 1.61
PTCHD3P2-201ENST00000424937 ZBTB42B2RXF5 422 aa25.13■■□□□ 1.61
PTCHD3P2-201ENST00000424937 ATP2A2P16615 1042 aaKnown RBP25.13■■□□□ 1.61
PTCHD3P2-201ENST00000424937 DNAJB2P25686 324 aa25.13■■□□□ 1.61
PTCHD3P2-201ENST00000424937 KLRC1P26715 233 aa25.13■■□□□ 1.61
PTCHD3P2-201ENST00000424937 ZNF697Q5TEC3 545 aa25.13■■□□□ 1.61
PTCHD3P2-201ENST00000424937 CEP131Q9UPN4 1083 aa25.13■■□□□ 1.61
PTCHD3P2-201ENST00000424937 CDY2AQ9Y6F7 541 aa25.13■■□□□ 1.61
PTCHD3P2-201ENST00000424937 KIF28PB7ZC32 967 aa25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 EML1O00423 815 aa25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 CHRNA1P02708 482 aa25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 RPLP2P05387 115 aaKnown RBP25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 KCNJ6P48051 423 aa25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 MRPS6P82932 125 aaKnown RBP25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 MGAT3Q09327 533 aa25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 NCAPH2Q6IBW4 605 aa25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 NOSTRINQ8IVI9 506 aa25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 BANK1Q8NDB2 785 aa25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 SLC9A7Q96T83 725 aa25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 PBX4Q9BYU1 374 aa25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 OSBPL7Q9BZF2 842 aa25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 SMC3Q9UQE7 1217 aa25.12■■□□□ 1.61
PTCHD3P2-201ENST00000424937 SMIM35A0A1B0GVV1 85 aa25.11■■□□□ 1.61
PTCHD3P2-201ENST00000424937 C22orf31O95567 290 aa25.11■■□□□ 1.61
PTCHD3P2-201ENST00000424937 MCM7P33993 719 aa25.11■■□□□ 1.61
PTCHD3P2-201ENST00000424937 PBX2P40425 430 aa25.11■■□□□ 1.61
PTCHD3P2-201ENST00000424937 TMEM62Q0P6H9 643 aa25.11■■□□□ 1.61
PTCHD3P2-201ENST00000424937 DBF4BQ8NFT6 615 aa25.11■■□□□ 1.61
PTCHD3P2-201ENST00000424937 FAM161BQ96MY7 647 aa25.11■■□□□ 1.61
PTCHD3P2-201ENST00000424937 NRBP2Q9NSY0 501 aa25.11■■□□□ 1.61
PTCHD3P2-201ENST00000424937 SEPT9Q9UHD8 586 aaPredicted RBP25.11■■□□□ 1.61
PTCHD3P2-201ENST00000424937 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.11■■□□□ 1.61
PTCHD3P2-201ENST00000424937 M0QZ92 97 aa25.1■■□□□ 1.61
PTCHD3P2-201ENST00000424937 GHRP10912 638 aa25.1■■□□□ 1.61
PTCHD3P2-201ENST00000424937 WDR5P61964 334 aaKnown RBP25.1■■□□□ 1.61
PTCHD3P2-201ENST00000424937 IKBKEQ14164 716 aa25.1■■□□□ 1.61
PTCHD3P2-201ENST00000424937 PLEKHG4Q58EX7 1191 aa25.1■■□□□ 1.61
PTCHD3P2-201ENST00000424937 SEPT8Q92599 483 aa25.1■■□□□ 1.61
PTCHD3P2-201ENST00000424937 TRPV2Q9Y5S1 764 aa25.1■■□□□ 1.61
PTCHD3P2-201ENST00000424937 ABHD14A-ACY1A0A1B0GW23 586 aa25.09■■□□□ 1.61
PTCHD3P2-201ENST00000424937 RABGGTBP53611 331 aa25.09■■□□□ 1.61
PTCHD3P2-201ENST00000424937 RAB30Q15771 203 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms