RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 ZNF668Q96K58 619 aaPredicted RBP13.12□□□□□ -0.31
PTPRN-204ENST00000423636 TAAR1Q96RJ0 339 aa13.12□□□□□ -0.31
PTPRN-204ENST00000423636 MYL1P05976 194 aa13.12□□□□□ -0.31
PTPRN-204ENST00000423636 SREBF1P36956 1147 aa13.12□□□□□ -0.31
PTPRN-204ENST00000423636 KIAA0753Q2KHM9 967 aa13.12□□□□□ -0.31
PTPRN-204ENST00000423636 HAUS3Q68CZ6 603 aa13.12□□□□□ -0.31
PTPRN-204ENST00000423636 OTOP1Q7RTM1 612 aa13.12□□□□□ -0.31
PTPRN-204ENST00000423636 ERGIC2Q96RQ1 377 aa13.12□□□□□ -0.31
PTPRN-204ENST00000423636 LXNQ9BS40 222 aa13.12□□□□□ -0.31
PTPRN-204ENST00000423636 ARMCX3Q9UH62 379 aaPredicted RBP13.12□□□□□ -0.31
PTPRN-204ENST00000423636 IGLV3-22A0A075B6J6 115 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 IPO5O00410 1097 aaKnown RBP13.11□□□□□ -0.31
PTPRN-204ENST00000423636 ZRANB2O95218 330 aaKnown RBP eCLIP13.11□□□□□ -0.31
PTPRN-204ENST00000423636 CAP2P40123 477 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 KRT83P78385 493 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 SF3B2Q13435 895 aaKnown RBP13.11□□□□□ -0.31
PTPRN-204ENST00000423636 ZCWPW2Q504Y3 356 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 TTC19Q6DKK2 380 aaPredicted RBP13.11□□□□□ -0.31
PTPRN-204ENST00000423636 VPS18Q9P253 973 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 PLAGL2Q9UPG8 496 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 NR3C1P04150 777 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 GCFC2P16383 781 aaKnown RBP13.11□□□□□ -0.31
PTPRN-204ENST00000423636 RPA1P27694 616 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 DLG4P78352 724 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 AMPD2Q01433 879 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 SFMBT2Q5VUG0 894 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 NAA35Q5VZE5 725 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 SLFN12Q8IYM2 578 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 ERMNQ8TAM6 284 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 FAM151AQ8WW52 585 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 JDP2Q8WYK2 163 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 RABGGTAQ92696 567 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 FUT8Q9BYC5 575 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 MYOZ2Q9NPC6 264 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 DMGDHQ9UI17 866 aaKnown RBP13.11□□□□□ -0.31
PTPRN-204ENST00000423636 TMX2Q9Y320 296 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 CTDP1Q9Y5B0 961 aaPredicted RBP13.11□□□□□ -0.31
PTPRN-204ENST00000423636 LRRIQ3A6PVS8 624 aaPredicted RBP13.11□□□□□ -0.31
PTPRN-204ENST00000423636 hCG_1984214I3L0E3 225 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 PTK2Q05397 1052 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 KNOP1Q1ED39 458 aaKnown RBP13.11□□□□□ -0.31
PTPRN-204ENST00000423636 ZNF746Q6NUN9 644 aaPredicted RBP13.11□□□□□ -0.31
PTPRN-204ENST00000423636 PDXDC1Q6P996 788 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 EEPD1Q7L9B9 569 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 ZNF713Q8N859 430 aaPredicted RBP13.11□□□□□ -0.31
PTPRN-204ENST00000423636 GMCL1Q96IK5 515 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 LRRC1Q9BTT6 524 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 MAGEF1Q9HAY2 307 aa13.11□□□□□ -0.31
PTPRN-204ENST00000423636 A0A0U1RQG5 324 aaPredicted RBP13.1□□□□□ -0.31
PTPRN-204ENST00000423636 PALMO75781 387 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 LRRC63Q05C16 580 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 CEP55Q53EZ4 464 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 HGSNATQ68CP4 663 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 POP1Q99575 1024 aaKnown RBP13.1□□□□□ -0.31
PTPRN-204ENST00000423636 VCPKMTQ9H867 229 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 NRXN2Q9P2S2 1712 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 ENTPD3O75355 529 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 COPB2P35606 906 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 VAV2P52735 878 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 MEA1Q16626 185 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 UGCGQ16739 394 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 CEP112Q8N8E3 955 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 SYT2Q8N9I0 419 aaPredicted RBP13.1□□□□□ -0.31
PTPRN-204ENST00000423636 RBM46Q8TBY0 533 aaKnown RBP13.1□□□□□ -0.31
PTPRN-204ENST00000423636 CCDC127Q96BQ5 260 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 KCNH7Q9NS40 1196 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 GCNT4Q9P109 453 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 KDM3AQ9Y4C1 1321 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 ANKRD65E5RJM6 399 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 XRCC5P13010 732 aaKnown RBP13.1□□□□□ -0.31
PTPRN-204ENST00000423636 R3HDM1Q15032 1099 aaKnown RBP13.1□□□□□ -0.31
PTPRN-204ENST00000423636 SPDYE2Q495Y8 402 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 TRAPPC11Q7Z392 1133 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 KLHL7Q8IXQ5 586 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 FAM178BQ8IXR5 827 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 GMCL1P1Q8NEA9 526 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 CNKSR2Q8WXI2 1034 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 IFT81Q8WYA0 676 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 ZNRF3Q9ULT6 936 aa13.1□□□□□ -0.31
PTPRN-204ENST00000423636 SIPA1L1O43166 1804 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 ARFGEF1Q9Y6D6 1849 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 ASTN1O14525 1302 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 LTBP1Q14766 1721 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 VIL1P09327 827 aaKnown RBP13.09□□□□□ -0.31
PTPRN-204ENST00000423636 HMGCS2P54868 508 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 TERF2Q15554 542 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 CCDC181Q5TID7 509 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 LMBRD2Q68DH5 695 aaPredicted RBP13.09□□□□□ -0.31
PTPRN-204ENST00000423636 SMAP1Q8IYB5 467 aaPredicted RBP13.09□□□□□ -0.31
PTPRN-204ENST00000423636 CRYGNQ8WXF5 182 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 ATG4CQ96DT6 458 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 NUP58Q9BVL2 599 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 EIF3CLB5ME19 914 aaKnown RBP13.09□□□□□ -0.31
PTPRN-204ENST00000423636 TGFB1I1O43294 461 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 RPS6P62753 249 aaKnown RBP13.09□□□□□ -0.31
PTPRN-204ENST00000423636 DMTNQ08495 405 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 EXOC3L4Q17RC7 722 aa13.09□□□□□ -0.31
PTPRN-204ENST00000423636 CBWD6Q4V339 395 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms