RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PDRG1Q9NUG6 133 aa17.25■□□□□ 0.35
USB1-202ENST00000423271 UPP2O95045 317 aa17.24■□□□□ 0.35
USB1-202ENST00000423271 CIITAP33076 1130 aa17.24■□□□□ 0.35
USB1-202ENST00000423271 ERVK-21P61565 698 aa17.24■□□□□ 0.35
USB1-202ENST00000423271 SSRP1Q08945 709 aaKnown RBP17.24■□□□□ 0.35
USB1-202ENST00000423271 TMEM62Q0P6H9 643 aa17.24■□□□□ 0.35
USB1-202ENST00000423271 TJAP1Q5JTD0 557 aa17.24■□□□□ 0.35
USB1-202ENST00000423271 FBXO47Q5MNV8 452 aa17.24■□□□□ 0.35
USB1-202ENST00000423271 TRIM22Q8IYM9 498 aa17.24■□□□□ 0.35
USB1-202ENST00000423271 SP7Q8TDD2 431 aaPredicted RBP17.24■□□□□ 0.35
USB1-202ENST00000423271 TOP1MTQ969P6 601 aa17.24■□□□□ 0.35
USB1-202ENST00000423271 AIFM3Q96NN9 605 aa17.24■□□□□ 0.35
USB1-202ENST00000423271 TGS1Q96RS0 853 aaKnown RBP17.24■□□□□ 0.35
USB1-202ENST00000423271 INSL6Q9Y581 213 aa17.24■□□□□ 0.35
USB1-202ENST00000423271 LOXHD1Q8IVV2 1947 aa17.23■□□□□ 0.35
USB1-202ENST00000423271 CPLX1O14810 134 aa17.23■□□□□ 0.35
USB1-202ENST00000423271 SLC26A2P50443 739 aa17.23■□□□□ 0.35
USB1-202ENST00000423271 NLRP5P59047 1200 aa17.23■□□□□ 0.35
USB1-202ENST00000423271 FAM160B1Q5W0V3 765 aa17.23■□□□□ 0.35
USB1-202ENST00000423271 SWSAP1Q6NVH7 229 aa17.23■□□□□ 0.35
USB1-202ENST00000423271 MIS18BP1Q6P0N0 1132 aa17.23■□□□□ 0.35
USB1-202ENST00000423271 ATP8B4Q8TF62 1192 aa17.23■□□□□ 0.35
USB1-202ENST00000423271 C17orf80Q9BSJ5 609 aa17.23■□□□□ 0.35
USB1-202ENST00000423271 AGO3Q9H9G7 860 aaKnown RBP17.23■□□□□ 0.35
USB1-202ENST00000423271 SUGCTQ9HAC7 445 aa17.23■□□□□ 0.35
USB1-202ENST00000423271 ZNF302Q9NR11 478 aa17.23■□□□□ 0.35
USB1-202ENST00000423271 SH3GLB2Q9NR46 395 aa17.23■□□□□ 0.35
USB1-202ENST00000423271 PCDHA2Q9Y5H9 948 aa17.23■□□□□ 0.35
USB1-202ENST00000423271 BRWD1Q9NSI6 2320 aa17.22■□□□□ 0.35
USB1-202ENST00000423271 MYH9P35579 1960 aaKnown RBP17.22■□□□□ 0.35
USB1-202ENST00000423271 DTNBO60941 627 aa17.22■□□□□ 0.35
USB1-202ENST00000423271 DEXIO95424 95 aa17.22■□□□□ 0.35
USB1-202ENST00000423271 ATP4AP20648 1035 aa17.22■□□□□ 0.35
USB1-202ENST00000423271 CD52P31358 61 aa17.22■□□□□ 0.35
USB1-202ENST00000423271 SKIV2LQ15477 1246 aaKnown RBP17.22■□□□□ 0.35
USB1-202ENST00000423271 PDXDC2PQ6P474 469 aa17.22■□□□□ 0.35
USB1-202ENST00000423271 MTHFD1LQ6UB35 978 aa17.22■□□□□ 0.35
USB1-202ENST00000423271 TSHZ1Q6ZSZ6 1077 aa17.22■□□□□ 0.35
USB1-202ENST00000423271 ATXN2LQ8WWM7 1075 aaKnown RBP17.22■□□□□ 0.35
USB1-202ENST00000423271 TNPO1Q92973 898 aaKnown RBP17.22■□□□□ 0.35
USB1-202ENST00000423271 YME1L1Q96TA2 773 aa17.22■□□□□ 0.35
USB1-202ENST00000423271 TBC1D22BQ9NU19 505 aa17.22■□□□□ 0.35
USB1-202ENST00000423271 PCDHA4Q9UN74 947 aa17.22■□□□□ 0.35
USB1-202ENST00000423271 TRPV2Q9Y5S1 764 aa17.22■□□□□ 0.35
USB1-202ENST00000423271 COL4A6Q14031 1691 aa17.22■□□□□ 0.35
USB1-202ENST00000423271 WDR81Q562E7 1941 aa17.21■□□□□ 0.35
USB1-202ENST00000423271 ZBTB42B2RXF5 422 aa17.21■□□□□ 0.35
USB1-202ENST00000423271 HBP1O60381 514 aa17.21■□□□□ 0.35
USB1-202ENST00000423271 ANAPC15P60006 121 aa17.21■□□□□ 0.35
USB1-202ENST00000423271 TFF2Q03403 129 aa17.21■□□□□ 0.35
USB1-202ENST00000423271 SCRN1Q12765 414 aa17.21■□□□□ 0.35
USB1-202ENST00000423271 NPY5RQ15761 445 aa17.21■□□□□ 0.35
USB1-202ENST00000423271 ZNF746Q6NUN9 644 aaPredicted RBP17.21■□□□□ 0.35
USB1-202ENST00000423271 TBCKQ8TEA7 893 aa17.21■□□□□ 0.35
USB1-202ENST00000423271 LINC01599Q8WXQ3 324 aa17.21■□□□□ 0.35
USB1-202ENST00000423271 GJA10Q969M2 543 aa17.21■□□□□ 0.35
USB1-202ENST00000423271 ASB2Q96Q27 587 aa17.21■□□□□ 0.35
USB1-202ENST00000423271 EVPLQ92817 2033 aa17.21■□□□□ 0.35
USB1-202ENST00000423271 NLRC5Q86WI3 1866 aa17.2■□□□□ 0.34
USB1-202ENST00000423271 TTC3P53804 2025 aa17.2■□□□□ 0.34
USB1-202ENST00000423271 SMIM35A0A1B0GVV1 85 aa17.2■□□□□ 0.34
USB1-202ENST00000423271 MSH4O15457 936 aa17.2■□□□□ 0.34
USB1-202ENST00000423271 RPLP2P05387 115 aaKnown RBP17.2■□□□□ 0.34
USB1-202ENST00000423271 KLRC1P26715 233 aa17.2■□□□□ 0.34
USB1-202ENST00000423271 MRPS5P82675 430 aaKnown RBP17.2■□□□□ 0.34
USB1-202ENST00000423271 KRT76Q01546 638 aa17.2■□□□□ 0.34
USB1-202ENST00000423271 IER5Q5VY09 327 aa17.2■□□□□ 0.34
USB1-202ENST00000423271 TRMT1LQ7Z2T5 733 aaKnown RBP17.2■□□□□ 0.34
USB1-202ENST00000423271 FBXO22Q8NEZ5 403 aa17.2■□□□□ 0.34
USB1-202ENST00000423271 SYMPKQ92797 1274 aaKnown RBP17.2■□□□□ 0.34
USB1-202ENST00000423271 TPCN1Q9ULQ1 816 aa17.2■□□□□ 0.34
USB1-202ENST00000423271 MAFBQ9Y5Q3 323 aaPredicted RBP17.2■□□□□ 0.34
USB1-202ENST00000423271 NCOR1O75376 2440 aa17.2■□□□□ 0.34
USB1-202ENST00000423271 COL1A2P08123 1366 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 M0QZ92 97 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 M0R2N6 131 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 ENPP3O14638 875 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 TDP2O95551 362 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 PSAPP07602 524 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 CPLX2Q6PUV4 134 aaKnown RBP17.19■□□□□ 0.34
USB1-202ENST00000423271 CKAP2LQ8IYA6 745 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 SMAP1Q8IYB5 467 aaPredicted RBP17.19■□□□□ 0.34
USB1-202ENST00000423271 BLIDQ8IZY5 108 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 DAGLBQ8NCG7 672 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 CELF4Q9BZC1 486 aaKnown RBP17.19■□□□□ 0.34
USB1-202ENST00000423271 TSPYL2Q9H2G4 693 aaPredicted RBP17.19■□□□□ 0.34
USB1-202ENST00000423271 GABBR1Q9UBS5 961 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 TCEAL9Q9UHQ7 104 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 KCNJ14Q9UNX9 436 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 PCDHA10Q9Y5I2 948 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 IGSF9BQ9UPX0 1349 aa17.19■□□□□ 0.34
USB1-202ENST00000423271 C22orf31O95567 290 aa17.18■□□□□ 0.34
USB1-202ENST00000423271 USP11P51784 963 aa17.18■□□□□ 0.34
USB1-202ENST00000423271 EPC2Q52LR7 807 aa17.18■□□□□ 0.34
USB1-202ENST00000423271 ZNF484Q5JVG2 852 aa17.18■□□□□ 0.34
USB1-202ENST00000423271 KIAA0319LQ8IZA0 1049 aa17.18■□□□□ 0.34
USB1-202ENST00000423271 SLC5A5Q92911 643 aa17.18■□□□□ 0.34
USB1-202ENST00000423271 IL17RAQ96F46 866 aa17.18■□□□□ 0.34
USB1-202ENST00000423271 SLKQ9H2G2 1235 aaPredicted RBP17.18■□□□□ 0.34
USB1-202ENST00000423271 RC3H2Q9HBD1 1191 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms