RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 CXCL10P02778 98 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 INSRRP14616 1297 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 MARK3P27448 753 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 STAT5BP51692 787 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 FOXK1P85037 733 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 BFSP2Q13515 415 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 KRT40Q6A162 431 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 GPR153Q6NV75 609 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 RUFY4Q6ZNE9 571 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 DEFB128Q7Z7B8 93 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 ETNPPLQ8TBG4 499 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 CAGE1Q8TC20 777 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 AFAP1L1Q8TED9 768 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 TRAPPC12Q8WVT3 735 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 GLG1Q92896 1179 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 ATP6V0A1Q93050 837 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 SDF4Q9BRK5 362 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 TBC1D22BQ9NU19 505 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 ERAP1Q9NZ08 941 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 NOD1Q9Y239 953 aa11.23□□□□□ -0.61
NF1-203ENST00000422121 ZNF862O60290 1169 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 PSMD10O75832 226 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 STBD1O95210 358 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 MMP1P03956 469 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 PBX2P40425 430 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 SETQ01105 290 aaPredicted RBP11.22□□□□□ -0.61
NF1-203ENST00000422121 NONOQ15233 471 aaKnown RBP eCLIP11.22□□□□□ -0.61
NF1-203ENST00000422121 RABEP1Q15276 862 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 ZNF746Q6NUN9 644 aaPredicted RBP11.22□□□□□ -0.61
NF1-203ENST00000422121 SWSAP1Q6NVH7 229 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 PSRC1Q6PGN9 363 aaPredicted RBP11.22□□□□□ -0.61
NF1-203ENST00000422121 MOXD1Q6UVY6 613 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 PIK3AP1Q6ZUJ8 805 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 LRRC8DQ7L1W4 858 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 RETREG2Q8NC44 543 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 NRCAMQ92823 1304 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 HAS1Q92839 578 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 ZSCAN31Q96LW9 406 aaPredicted RBP11.22□□□□□ -0.61
NF1-203ENST00000422121 LLPHQ9BRT6 129 aaKnown RBP11.22□□□□□ -0.61
NF1-203ENST00000422121 TTYH1Q9H313 450 aaPredicted RBP11.22□□□□□ -0.61
NF1-203ENST00000422121 UNC45AQ9H3U1 944 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 KCNMB3Q9NPA1 279 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 ZNF215Q9UL58 517 aaPredicted RBP11.22□□□□□ -0.61
NF1-203ENST00000422121 MAFBQ9Y5Q3 323 aaPredicted RBP11.22□□□□□ -0.61
NF1-203ENST00000422121 TRANK1O15050 2925 aa11.22□□□□□ -0.61
NF1-203ENST00000422121 UNC80Q8N2C7 3258 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.61
NF1-203ENST00000422121 CHRNA1P02708 482 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 RFC2P35250 354 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 THPOP40225 353 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 FOSBP53539 338 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 SMAD3P84022 425 aaKnown RBP11.21□□□□□ -0.61
NF1-203ENST00000422121 GUCY1B3Q02153 619 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 PPFIA1Q13136 1202 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 GRIK4Q16099 956 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 UGCGQ16739 394 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 FAM26DQ5JW98 314 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 KRT25Q7Z3Z0 450 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 RPAINQ86UA6 219 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 RPUSD2Q8IZ73 545 aaKnown RBP11.21□□□□□ -0.61
NF1-203ENST00000422121 WASF1Q92558 559 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 RIT2Q99578 217 aa11.21□□□□□ -0.61
NF1-203ENST00000422121 SH2B1Q9NRF2 756 aaPredicted RBP11.21□□□□□ -0.61
NF1-203ENST00000422121 TANC1Q9C0D5 1861 aa11.21□□□□□ -0.62
NF1-203ENST00000422121 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.2□□□□□ -0.62
NF1-203ENST00000422121 CCDC194A0A1B0GVG4 234 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.2□□□□□ -0.62
NF1-203ENST00000422121 C2orf72A6NCS6 295 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 EML1O00423 815 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 KRT2P35908 639 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 IGBP1P78318 339 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 KRT76Q01546 638 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 MGAT3Q09327 533 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 LETM2Q2VYF4 491 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 PPP4R3AQ6IN85 833 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 NEK8Q86SG6 692 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 SMAP1Q8IYB5 467 aaPredicted RBP11.2□□□□□ -0.62
NF1-203ENST00000422121 DIS3L2Q8IYB7 885 aaKnown RBP11.2□□□□□ -0.62
NF1-203ENST00000422121 TMX3Q96JJ7 454 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 PBX4Q9BYU1 374 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 MTMR10Q9NXD2 777 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 DDX25Q9UHL0 483 aaKnown RBP11.2□□□□□ -0.62
NF1-203ENST00000422121 VAV3Q9UKW4 847 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 PCDHA10Q9Y5I2 948 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 XIRP2A4UGR9 3374 aa11.2□□□□□ -0.62
NF1-203ENST00000422121 POTEB3A0JP26 581 aa11.19□□□□□ -0.62
NF1-203ENST00000422121 RSPH10B2B2RC85 870 aa11.19□□□□□ -0.62
NF1-203ENST00000422121 PFKMP08237 780 aa11.19□□□□□ -0.62
NF1-203ENST00000422121 RSPH10BP0C881 870 aa11.19□□□□□ -0.62
NF1-203ENST00000422121 GNAT1P11488 350 aa11.19□□□□□ -0.62
NF1-203ENST00000422121 XBP1P17861 261 aa11.19□□□□□ -0.62
NF1-203ENST00000422121 RABGGTBP53611 331 aa11.19□□□□□ -0.62
NF1-203ENST00000422121 SPIRE1Q08AE8 756 aa11.19□□□□□ -0.62
NF1-203ENST00000422121 LRCH2Q5VUJ6 765 aa11.19□□□□□ -0.62
NF1-203ENST00000422121 MIS18BP1Q6P0N0 1132 aa11.19□□□□□ -0.62
NF1-203ENST00000422121 PDXDC2PQ6P474 469 aa11.19□□□□□ -0.62
NF1-203ENST00000422121 POTEBQ6S5H4 581 aa11.19□□□□□ -0.62
NF1-203ENST00000422121 TMCO2Q7Z6W1 182 aaPredicted RBP11.19□□□□□ -0.62
NF1-203ENST00000422121 DEFB123Q8N688 67 aa11.19□□□□□ -0.62
NF1-203ENST00000422121 CCDC155Q8N6L0 562 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms