RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 GUCY1B3Q02153 619 aa29.81■■■□□ 2.36
CDK9-202ENST00000421939 ZNF697Q5TEC3 545 aa29.81■■■□□ 2.36
CDK9-202ENST00000421939 CNKSR3Q6P9H4 555 aa29.81■■■□□ 2.36
CDK9-202ENST00000421939 CKAP2LQ8IYA6 745 aa29.81■■■□□ 2.36
CDK9-202ENST00000421939 FAM184AQ8NB25 1140 aa29.81■■■□□ 2.36
CDK9-202ENST00000421939 TRAPPC12Q8WVT3 735 aa29.81■■■□□ 2.36
CDK9-202ENST00000421939 BACH2Q9BYV9 841 aa29.81■■■□□ 2.36
CDK9-202ENST00000421939 CD2BP2O95400 341 aaKnown RBP29.8■■■□□ 2.36
CDK9-202ENST00000421939 SAFBQ15424 915 aaKnown RBP eCLIP29.8■■■□□ 2.36
CDK9-202ENST00000421939 RSPH3Q86UC2 560 aa29.8■■■□□ 2.36
CDK9-202ENST00000421939 RDM1Q8NG50 284 aa29.8■■■□□ 2.36
CDK9-202ENST00000421939 ZBTB10Q96DT7 871 aa29.8■■■□□ 2.36
CDK9-202ENST00000421939 KCNMB3Q9NPA1 279 aa29.8■■■□□ 2.36
CDK9-202ENST00000421939 COL1A2P08123 1366 aa29.79■■■□□ 2.36
CDK9-202ENST00000421939 MYH9P35579 1960 aaKnown RBP29.79■■■□□ 2.36
CDK9-202ENST00000421939 ATP4AP20648 1035 aa29.79■■■□□ 2.36
CDK9-202ENST00000421939 MCM2P49736 904 aa29.79■■■□□ 2.36
CDK9-202ENST00000421939 FAM26DQ5JW98 314 aa29.79■■■□□ 2.36
CDK9-202ENST00000421939 B3GNT9Q6UX72 402 aa29.79■■■□□ 2.36
CDK9-202ENST00000421939 FAM20AQ96MK3 541 aa29.79■■■□□ 2.36
CDK9-202ENST00000421939 PBX4Q9BYU1 374 aa29.79■■■□□ 2.36
CDK9-202ENST00000421939 TMEM265A0A087WTH1 108 aa29.78■■■□□ 2.36
CDK9-202ENST00000421939 RPLP2P05387 115 aaKnown RBP29.78■■■□□ 2.36
CDK9-202ENST00000421939 ATP2A2P16615 1042 aaKnown RBP29.78■■■□□ 2.36
CDK9-202ENST00000421939 MIER3Q7Z3K6 550 aa29.78■■■□□ 2.36
CDK9-202ENST00000421939 DNAJB3Q8WWF6 145 aa29.78■■■□□ 2.36
CDK9-202ENST00000421939 BBXQ8WY36 941 aaPredicted RBP29.78■■■□□ 2.36
CDK9-202ENST00000421939 TMX3Q96JJ7 454 aa29.78■■■□□ 2.36
CDK9-202ENST00000421939 FAM167AQ96KS9 214 aa29.78■■■□□ 2.36
CDK9-202ENST00000421939 SLC9A7Q96T83 725 aa29.78■■■□□ 2.36
CDK9-202ENST00000421939 PCDHA2Q9Y5H9 948 aa29.78■■■□□ 2.36
CDK9-202ENST00000421939 WDR81Q562E7 1941 aa29.77■■■□□ 2.36
CDK9-202ENST00000421939 PBX2P40425 430 aa29.77■■■□□ 2.36
CDK9-202ENST00000421939 ZNF484Q5JVG2 852 aa29.77■■■□□ 2.36
CDK9-202ENST00000421939 POTEDQ86YR6 584 aa29.77■■■□□ 2.36
CDK9-202ENST00000421939 FAM49AQ9H0Q0 323 aaPredicted RBP29.77■■■□□ 2.36
CDK9-202ENST00000421939 MTMR10Q9NXD2 777 aa29.77■■■□□ 2.36
CDK9-202ENST00000421939 ZBTB42B2RXF5 422 aa29.76■■■□□ 2.35
CDK9-202ENST00000421939 TBX3O15119 743 aa29.76■■■□□ 2.35
CDK9-202ENST00000421939 KCNJ6P48051 423 aa29.76■■■□□ 2.35
CDK9-202ENST00000421939 RAB30Q15771 203 aa29.76■■■□□ 2.35
CDK9-202ENST00000421939 TCTN1Q2MV58 587 aa29.76■■■□□ 2.35
CDK9-202ENST00000421939 MTHFD1LQ6UB35 978 aa29.76■■■□□ 2.35
CDK9-202ENST00000421939 FBXO18Q8NFZ0 1043 aa29.76■■■□□ 2.35
CDK9-202ENST00000421939 TIFAQ96CG3 184 aa29.76■■■□□ 2.35
CDK9-202ENST00000421939 VAV3Q9UKW4 847 aa29.76■■■□□ 2.35
CDK9-202ENST00000421939 ABHD14A-ACY1A0A1B0GW23 586 aa29.75■■■□□ 2.35
CDK9-202ENST00000421939 ZNF862O60290 1169 aa29.75■■■□□ 2.35
CDK9-202ENST00000421939 CHRNA1P02708 482 aa29.75■■■□□ 2.35
CDK9-202ENST00000421939 WDR5P61964 334 aaKnown RBP29.75■■■□□ 2.35
CDK9-202ENST00000421939 PRKCEQ02156 737 aa29.75■■■□□ 2.35
CDK9-202ENST00000421939 MGAT3Q09327 533 aa29.75■■■□□ 2.35
CDK9-202ENST00000421939 UGCGQ16739 394 aa29.75■■■□□ 2.35
CDK9-202ENST00000421939 PLEKHG4Q58EX7 1191 aa29.75■■■□□ 2.35
CDK9-202ENST00000421939 TRMT1LQ7Z2T5 733 aaKnown RBP29.75■■■□□ 2.35
CDK9-202ENST00000421939 DBF4BQ8NFT6 615 aa29.75■■■□□ 2.35
CDK9-202ENST00000421939 FAM161BQ96MY7 647 aa29.75■■■□□ 2.35
CDK9-202ENST00000421939 TTYH1Q9H313 450 aaPredicted RBP29.75■■■□□ 2.35
CDK9-202ENST00000421939 MSRAQ9UJ68 235 aa29.75■■■□□ 2.35
CDK9-202ENST00000421939 GBF1Q92538 1859 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 SIP14410 1827 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 RBAK-RBAKDNI3L0D1 243 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 MARCH6O60337 910 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 EFCAB14O75071 495 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 OATP04181 439 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 KLRC1P26715 233 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 MRPS6P82932 125 aaKnown RBP29.74■■■□□ 2.35
CDK9-202ENST00000421939 PPP2R5CQ13362 524 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 IKBKEQ14164 716 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 PHOSPHO2Q8TCD6 241 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 HAS1Q92839 578 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 OSBPL7Q9BZF2 842 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 CEP131Q9UPN4 1083 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 CDY2AQ9Y6F7 541 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 CHD9Q3L8U1 2897 aa29.74■■■□□ 2.35
CDK9-202ENST00000421939 SMIM35A0A1B0GVV1 85 aa29.73■■■□□ 2.35
CDK9-202ENST00000421939 RABGGTBP53611 331 aa29.73■■■□□ 2.35
CDK9-202ENST00000421939 SEPT8Q92599 483 aa29.73■■■□□ 2.35
CDK9-202ENST00000421939 FOXP1Q9H334 677 aaPredicted RBP29.73■■■□□ 2.35
CDK9-202ENST00000421939 SEMA6BQ9H3T3 888 aa29.73■■■□□ 2.35
CDK9-202ENST00000421939 KIF3AQ9Y496 699 aa29.73■■■□□ 2.35
CDK9-202ENST00000421939 C22orf31O95567 290 aa29.72■■■□□ 2.35
CDK9-202ENST00000421939 SLFN12Q8IYM2 578 aa29.72■■■□□ 2.35
CDK9-202ENST00000421939 CDH23Q9H251 3354 aa29.72■■■□□ 2.35
CDK9-202ENST00000421939 WNT7AO00755 349 aa29.71■■■□□ 2.35
CDK9-202ENST00000421939 BAG4O95429 457 aaKnown RBP29.71■■■□□ 2.35
CDK9-202ENST00000421939 GHRP10912 638 aa29.71■■■□□ 2.35
CDK9-202ENST00000421939 IER5Q5VY09 327 aa29.71■■■□□ 2.35
CDK9-202ENST00000421939 HERC6Q8IVU3 1022 aa29.71■■■□□ 2.35
CDK9-202ENST00000421939 NRBP2Q9NSY0 501 aa29.71■■■□□ 2.35
CDK9-202ENST00000421939 YBX2Q9Y2T7 364 aaKnown RBP29.71■■■□□ 2.35
CDK9-202ENST00000421939 PCDHA11Q9Y5I1 949 aa29.71■■■□□ 2.35
CDK9-202ENST00000421939 TRPV2Q9Y5S1 764 aa29.71■■■□□ 2.35
CDK9-202ENST00000421939 M0QZ92 97 aa29.7■■■□□ 2.35
CDK9-202ENST00000421939 EML1O00423 815 aa29.7■■■□□ 2.35
CDK9-202ENST00000421939 NEMFO60524 1076 aa29.7■■■□□ 2.35
CDK9-202ENST00000421939 DEFB103AP81534 67 aa29.7■■■□□ 2.35
CDK9-202ENST00000421939 GNL2Q13823 731 aaKnown RBP29.7■■■□□ 2.35
CDK9-202ENST00000421939 CALCRLQ16602 461 aa29.7■■■□□ 2.35
CDK9-202ENST00000421939 APBB2Q92870 758 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms