RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 MXD4Q14582 209 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-206ENST00000421141 AFAP1L2Q8N4X5 818 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 MROH8Q9H579 483 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 ZKSCAN4Q969J2 545 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-206ENST00000421141 TUBGCP2Q9BSJ2 902 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 SCAF8Q9UPN6 1271 aaKnown RBP11.66□□□□□ -0.54
PTCH1-206ENST00000421141 GOLGA8CPA6NN73 597 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 SLC12A2P55011 1212 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 BACE1P56817 501 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 FAM149B1Q96BN6 582 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 SEL1LQ9UBV2 794 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 ARL13BQ3SXY8 428 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 CFAP221Q4G0U5 840 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 GNASQ5JWF2 1037 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 INTS8Q75QN2 995 aaKnown RBP11.66□□□□□ -0.54
PTCH1-206ENST00000421141 ANKRD13CQ8N6S4 541 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 CPVLQ9H3G5 476 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 MAFGO15525 162 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 STAT5BP51692 787 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 CACNB1Q02641 598 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-206ENST00000421141 UBLCP1Q8WVY7 318 aaPredicted RBP11.66□□□□□ -0.54
PTCH1-206ENST00000421141 GLT1D1Q96MS3 346 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 TRIM7Q9C029 511 aa11.66□□□□□ -0.54
PTCH1-206ENST00000421141 SCFD2Q8WU76 684 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 POLR3FQ9H1D9 316 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-206ENST00000421141 PCDHB6Q9Y5E3 794 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 CCDC105Q8IYK2 499 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 PRIMPOLQ96LW4 560 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 PRR12Q9ULL5 1215 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 DPYSL4O14531 572 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 MAGEB2O15479 319 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 TRAPPC3O43617 180 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 YWHABP31946 246 aaKnown RBP11.65□□□□□ -0.54
PTCH1-206ENST00000421141 MXI1P50539 228 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 LAMC2Q13753 1193 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 XRN1Q8IZH2 1706 aaKnown RBP11.65□□□□□ -0.54
PTCH1-206ENST00000421141 GPC3P51654 580 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 NOLC1Q14978 699 aaKnown RBP eCLIP11.65□□□□□ -0.54
PTCH1-206ENST00000421141 LGSNQ5TDP6 509 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 POTEDQ86YR6 584 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 LMCD1Q9NZU5 365 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 EIF3CLB5ME19 914 aaKnown RBP11.65□□□□□ -0.54
PTCH1-206ENST00000421141 ARHGAP6O43182 974 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 SLFN14P0C7P3 912 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 CAP2P40123 477 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 ZNF75DP51815 510 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 BAATQ14032 418 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-206ENST00000421141 PGBD4Q96DM1 585 aa11.65□□□□□ -0.54
PTCH1-206ENST00000421141 EIF3CQ99613 913 aaKnown RBP11.65□□□□□ -0.54
PTCH1-206ENST00000421141 PDHBP11177 359 aa11.65□□□□□ -0.55
PTCH1-206ENST00000421141 GBP1P32455 592 aa11.65□□□□□ -0.55
PTCH1-206ENST00000421141 PPP2R5EQ16537 467 aa11.65□□□□□ -0.55
PTCH1-206ENST00000421141 C6orf163Q5TEZ5 329 aa11.65□□□□□ -0.55
PTCH1-206ENST00000421141 GRK7Q8WTQ7 553 aa11.65□□□□□ -0.55
PTCH1-206ENST00000421141 PPP4CP60510 307 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 XRRA1Q6P2D8 792 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 OR6B3Q8NGW1 331 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 ATP2A3Q93084 1043 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 EIF2AK1Q9BQI3 630 aaKnown RBP11.64□□□□□ -0.55
PTCH1-206ENST00000421141 TIPINQ9BVW5 301 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 ERAP1Q9NZ08 941 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 PCDHB7Q9Y5E2 793 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 ZNF699Q32M78 642 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 MAP7D1Q3KQU3 841 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 C8orf74Q6P047 294 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 ZNF449Q6P9G9 518 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 TUFT1Q9NNX1 390 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 LRRN2O75325 713 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 C4orf50Q6ZRC1 276 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 SGMS1Q86VZ5 419 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 ZFP91Q96JP5 570 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-206ENST00000421141 PRMT6Q96LA8 375 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-206ENST00000421141 STXBP3O00186 592 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 SRGAP2BP0DMP2 458 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 MAN2A1Q16706 1144 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 ZNF667Q5HYK9 610 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 RNF219Q5W0B1 726 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-206ENST00000421141 MB21D2Q8IYB1 491 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-206ENST00000421141 DYNC1LI2O43237 492 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-206ENST00000421141 NBPF9Q3BBW0 867 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 IFT20Q8IY31 132 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 SMAP1Q8IYB5 467 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-206ENST00000421141 DYDC2Q96IM9 177 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 RWDD2AQ9UIY3 292 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 ANAPC5Q9UJX4 755 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 SPEF2Q9C093 1822 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 RIOK3O14730 519 aaKnown RBP11.64□□□□□ -0.55
PTCH1-206ENST00000421141 EFNA5P52803 228 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 PLEKHH3Q7Z736 793 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 ANKS4BQ8N8V4 417 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 TRIM58Q8NG06 486 aa11.64□□□□□ -0.55
PTCH1-206ENST00000421141 MRPL47Q9HD33 250 aaKnown RBP11.64□□□□□ -0.55
PTCH1-206ENST00000421141 MYH10P35580 1976 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 GGPS1O95749 300 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 VEPH1Q14D04 833 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 LRRC41Q15345 812 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 TTC1Q99614 292 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 RAB17Q9H0T7 212 aa11.63□□□□□ -0.55
PTCH1-206ENST00000421141 UBE2TQ9NPD8 197 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-206ENST00000421141 POTEMA6NI47 508 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms