RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 CXXC1Q9P0U4 656 aaPredicted RBP17.88■□□□□ 0.45
VAT1-202ENST00000420567 TANC1Q9C0D5 1861 aa17.88■□□□□ 0.45
VAT1-202ENST00000420567 EML1O00423 815 aa17.87■□□□□ 0.45
VAT1-202ENST00000420567 TBX3O15119 743 aa17.87■□□□□ 0.45
VAT1-202ENST00000420567 ZNF862O60290 1169 aa17.87■□□□□ 0.45
VAT1-202ENST00000420567 HBP1O60381 514 aa17.87■□□□□ 0.45
VAT1-202ENST00000420567 NEMFO60524 1076 aa17.87■□□□□ 0.45
VAT1-202ENST00000420567 PRKCEQ02156 737 aa17.87■□□□□ 0.45
VAT1-202ENST00000420567 RASIP1Q5U651 963 aa17.87■□□□□ 0.45
VAT1-202ENST00000420567 FAM109BQ6ICB4 259 aaPredicted RBP17.87■□□□□ 0.45
VAT1-202ENST00000420567 TAF2Q6P1X5 1199 aa17.87■□□□□ 0.45
VAT1-202ENST00000420567 NOSTRINQ8IVI9 506 aa17.87■□□□□ 0.45
VAT1-202ENST00000420567 DNAJB3Q8WWF6 145 aa17.87■□□□□ 0.45
VAT1-202ENST00000420567 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.87■□□□□ 0.45
VAT1-202ENST00000420567 TRIOBPQ9H2D6 2365 aa17.87■□□□□ 0.45
VAT1-202ENST00000420567 MCM7P33993 719 aa17.86■□□□□ 0.45
VAT1-202ENST00000420567 PPP2R5CQ13362 524 aa17.86■□□□□ 0.45
VAT1-202ENST00000420567 CALCRLQ16602 461 aa17.86■□□□□ 0.45
VAT1-202ENST00000420567 NCAPH2Q6IBW4 605 aa17.86■□□□□ 0.45
VAT1-202ENST00000420567 MTHFD1LQ6UB35 978 aa17.86■□□□□ 0.45
VAT1-202ENST00000420567 BANK1Q8NDB2 785 aa17.86■□□□□ 0.45
VAT1-202ENST00000420567 RDM1Q8NG50 284 aa17.86■□□□□ 0.45
VAT1-202ENST00000420567 BBXQ8WY36 941 aaPredicted RBP17.86■□□□□ 0.45
VAT1-202ENST00000420567 MTIF3Q9H2K0 278 aaKnown RBP17.86■□□□□ 0.45
VAT1-202ENST00000420567 ZBTB42B2RXF5 422 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 CAND2O75155 1236 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 BAG4O95429 457 aaKnown RBP17.85■□□□□ 0.45
VAT1-202ENST00000420567 CXCL10P02778 98 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 OATP04181 439 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 COL1A2P08123 1366 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 RANBP2P49792 3224 aaKnown RBP17.85■□□□□ 0.45
VAT1-202ENST00000420567 CUL4AQ13619 759 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 NBR1Q14596 966 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 TCTN1Q2MV58 587 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 ZNF484Q5JVG2 852 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 MCTP1Q6DN14 999 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 SLFN12Q8IYM2 578 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 FAM167AQ96KS9 214 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 OSBPL7Q9BZF2 842 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 TMEM60Q9H2L4 133 aa17.85■□□□□ 0.45
VAT1-202ENST00000420567 GRXCR1A8MXD5 290 aa17.84■□□□□ 0.45
VAT1-202ENST00000420567 H3BQV1 296 aa17.84■□□□□ 0.45
VAT1-202ENST00000420567 PARNO95453 639 aaKnown RBP17.84■□□□□ 0.45
VAT1-202ENST00000420567 ACTN1P12814 892 aa17.84■□□□□ 0.45
VAT1-202ENST00000420567 KLRC1P26715 233 aa17.84■□□□□ 0.45
VAT1-202ENST00000420567 SPIRE1Q08AE8 756 aa17.84■□□□□ 0.45
VAT1-202ENST00000420567 TMEM62Q0P6H9 643 aa17.84■□□□□ 0.45
VAT1-202ENST00000420567 ZNF174Q15697 407 aa17.84■□□□□ 0.45
VAT1-202ENST00000420567 TTC38Q5R3I4 469 aa17.84■□□□□ 0.45
VAT1-202ENST00000420567 RSPH3Q86UC2 560 aa17.84■□□□□ 0.45
VAT1-202ENST00000420567 SEPT9Q9UHD8 586 aaPredicted RBP17.84■□□□□ 0.45
VAT1-202ENST00000420567 NOL7Q9UMY1 257 aaKnown RBP17.84■□□□□ 0.45
VAT1-202ENST00000420567 PCDHA2Q9Y5H9 948 aa17.84■□□□□ 0.45
VAT1-202ENST00000420567 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.83■□□□□ 0.44
VAT1-202ENST00000420567 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.83■□□□□ 0.44
VAT1-202ENST00000420567 TMEM150BA6NC51 233 aa17.83■□□□□ 0.44
VAT1-202ENST00000420567 K7ELQ4 463 aaPredicted RBP17.83■□□□□ 0.44
VAT1-202ENST00000420567 C22orf31O95567 290 aa17.83■□□□□ 0.44
VAT1-202ENST00000420567 CHRNA1P02708 482 aa17.83■□□□□ 0.44
VAT1-202ENST00000420567 U2AF2P26368 475 aaKnown RBP eCLIP17.83■□□□□ 0.44
VAT1-202ENST00000420567 TXKP42681 527 aa17.83■□□□□ 0.44
VAT1-202ENST00000420567 MRPS6P82932 125 aaKnown RBP17.83■□□□□ 0.44
VAT1-202ENST00000420567 MGAT3Q09327 533 aa17.83■□□□□ 0.44
VAT1-202ENST00000420567 FAM26DQ5JW98 314 aa17.83■□□□□ 0.44
VAT1-202ENST00000420567 CNKSR3Q6P9H4 555 aa17.83■□□□□ 0.44
VAT1-202ENST00000420567 RPAINQ86UA6 219 aa17.83■□□□□ 0.44
VAT1-202ENST00000420567 FOXD4L1Q9NU39 408 aa17.83■□□□□ 0.44
VAT1-202ENST00000420567 CDY2AQ9Y6F7 541 aa17.83■□□□□ 0.44
VAT1-202ENST00000420567 SLC4A7Q9Y6M7 1214 aa17.83■□□□□ 0.44
VAT1-202ENST00000420567 SMIM35A0A1B0GVV1 85 aa17.82■□□□□ 0.44
VAT1-202ENST00000420567 PSMC5P62195 406 aa17.82■□□□□ 0.44
VAT1-202ENST00000420567 SMAD3P84022 425 aaKnown RBP17.82■□□□□ 0.44
VAT1-202ENST00000420567 EPHA7Q15375 998 aa17.82■□□□□ 0.44
VAT1-202ENST00000420567 LARP1BQ659C4 914 aaKnown RBP17.82■□□□□ 0.44
VAT1-202ENST00000420567 DBF4BQ8NFT6 615 aa17.82■□□□□ 0.44
VAT1-202ENST00000420567 MTMR9Q96QG7 549 aa17.82■□□□□ 0.44
VAT1-202ENST00000420567 SH2D3AQ9BRG2 576 aa17.82■□□□□ 0.44
VAT1-202ENST00000420567 TTC12Q9H892 705 aaPredicted RBP17.82■□□□□ 0.44
VAT1-202ENST00000420567 NRBP2Q9NSY0 501 aa17.82■□□□□ 0.44
VAT1-202ENST00000420567 PCDHA12Q9UN75 941 aa17.82■□□□□ 0.44
VAT1-202ENST00000420567 CEP131Q9UPN4 1083 aa17.82■□□□□ 0.44
VAT1-202ENST00000420567 SCN5AQ14524 2016 aa17.82■□□□□ 0.44
VAT1-202ENST00000420567 STBD1O95210 358 aa17.81■□□□□ 0.44
VAT1-202ENST00000420567 GHRP10912 638 aa17.81■□□□□ 0.44
VAT1-202ENST00000420567 PBX2P40425 430 aa17.81■□□□□ 0.44
VAT1-202ENST00000420567 TRAPPC10P48553 1259 aa17.81■□□□□ 0.44
VAT1-202ENST00000420567 CYP4A11Q02928 519 aa17.81■□□□□ 0.44
VAT1-202ENST00000420567 MTERF2Q49AM1 385 aa17.81■□□□□ 0.44
VAT1-202ENST00000420567 XKR3Q5GH77 459 aa17.81■□□□□ 0.44
VAT1-202ENST00000420567 Q7L0L9 218 aa17.81■□□□□ 0.44
VAT1-202ENST00000420567 DYDC2Q96IM9 177 aa17.81■□□□□ 0.44
VAT1-202ENST00000420567 PPP1R16BQ96T49 567 aa17.81■□□□□ 0.44
VAT1-202ENST00000420567 LXNQ9BS40 222 aa17.81■□□□□ 0.44
VAT1-202ENST00000420567 RGL1Q9NZL6 768 aa17.81■□□□□ 0.44
VAT1-202ENST00000420567 WRAP73Q9P2S5 460 aaPredicted RBP17.81■□□□□ 0.44
VAT1-202ENST00000420567 POTEMA6NI47 508 aa17.8■□□□□ 0.44
VAT1-202ENST00000420567 DDX11L8A8MPP1 907 aa17.8■□□□□ 0.44
VAT1-202ENST00000420567 M0QZ92 97 aa17.8■□□□□ 0.44
VAT1-202ENST00000420567 BAIAP3O94812 1187 aa17.8■□□□□ 0.44
VAT1-202ENST00000420567 P4HBP07237 508 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms