RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 HBP1O60381 514 aa24.22■■□□□ 1.47
PTPN4-202ENST00000420482 LPXNO60711 386 aa24.22■■□□□ 1.47
PTPN4-202ENST00000420482 FAM86B2P0C5J1 330 aa24.22■■□□□ 1.47
PTPN4-202ENST00000420482 MGAT3Q09327 533 aa24.22■■□□□ 1.47
PTPN4-202ENST00000420482 LPIN1Q14693 890 aa24.22■■□□□ 1.47
PTPN4-202ENST00000420482 HLA-CQ95604 372 aa24.22■■□□□ 1.47
PTPN4-202ENST00000420482 TM6SF1Q9BZW5 370 aa24.22■■□□□ 1.47
PTPN4-202ENST00000420482 ZNF302Q9NR11 478 aa24.22■■□□□ 1.47
PTPN4-202ENST00000420482 XIRP2A4UGR9 3374 aa24.22■■□□□ 1.47
PTPN4-202ENST00000420482 IGKV6D-21A0A0A0MT36 114 aa24.21■■□□□ 1.47
PTPN4-202ENST00000420482 BMP1P13497 986 aa24.21■■□□□ 1.47
PTPN4-202ENST00000420482 COL9A1P20849 921 aa24.21■■□□□ 1.47
PTPN4-202ENST00000420482 CCT2P78371 535 aaKnown RBP24.21■■□□□ 1.47
PTPN4-202ENST00000420482 TFF2Q03403 129 aa24.21■■□□□ 1.47
PTPN4-202ENST00000420482 NTRK3Q16288 839 aa24.21■■□□□ 1.47
PTPN4-202ENST00000420482 PTPROQ16827 1216 aa24.21■■□□□ 1.47
PTPN4-202ENST00000420482 FBXO47Q5MNV8 452 aa24.21■■□□□ 1.47
PTPN4-202ENST00000420482 ABHD15Q6UXT9 468 aa24.21■■□□□ 1.47
PTPN4-202ENST00000420482 FAM43BQ6ZT52 329 aaPredicted RBP24.21■■□□□ 1.47
PTPN4-202ENST00000420482 SMAP1Q8IYB5 467 aaPredicted RBP24.21■■□□□ 1.47
PTPN4-202ENST00000420482 CRYGNQ8WXF5 182 aa24.21■■□□□ 1.47
PTPN4-202ENST00000420482 IL17RAQ96F46 866 aa24.21■■□□□ 1.47
PTPN4-202ENST00000420482 FTHL17Q9BXU8 183 aa24.21■■□□□ 1.47
PTPN4-202ENST00000420482 C22orf23Q9BZE7 217 aa24.21■■□□□ 1.47
PTPN4-202ENST00000420482 TRPV2Q9Y5S1 764 aa24.21■■□□□ 1.47
PTPN4-202ENST00000420482 COL1A2P08123 1366 aa24.2■■□□□ 1.46
PTPN4-202ENST00000420482 IGLV3-22A0A075B6J6 115 aa24.2■■□□□ 1.46
PTPN4-202ENST00000420482 SMIM35A0A1B0GVV1 85 aa24.2■■□□□ 1.46
PTPN4-202ENST00000420482 KRT76Q01546 638 aa24.2■■□□□ 1.46
PTPN4-202ENST00000420482 SSRP1Q08945 709 aaKnown RBP24.2■■□□□ 1.46
PTPN4-202ENST00000420482 KRT40Q6A162 431 aa24.2■■□□□ 1.46
PTPN4-202ENST00000420482 ZNF746Q6NUN9 644 aaPredicted RBP24.2■■□□□ 1.46
PTPN4-202ENST00000420482 PDXDC2PQ6P474 469 aa24.2■■□□□ 1.46
PTPN4-202ENST00000420482 SPRED2Q7Z698 418 aa24.2■■□□□ 1.46
PTPN4-202ENST00000420482 ATP8B4Q8TF62 1192 aa24.2■■□□□ 1.46
PTPN4-202ENST00000420482 ZNF274Q96GC6 653 aaPredicted RBP24.2■■□□□ 1.46
PTPN4-202ENST00000420482 OSBPL7Q9BZF2 842 aa24.2■■□□□ 1.46
PTPN4-202ENST00000420482 COL4A6Q14031 1691 aa24.19■■□□□ 1.46
PTPN4-202ENST00000420482 CCNE2O96020 404 aa24.19■■□□□ 1.46
PTPN4-202ENST00000420482 NLRP5P59047 1200 aa24.19■■□□□ 1.46
PTPN4-202ENST00000420482 PRR16Q569H4 304 aa24.19■■□□□ 1.46
PTPN4-202ENST00000420482 ZNF484Q5JVG2 852 aa24.19■■□□□ 1.46
PTPN4-202ENST00000420482 MTHFD1LQ6UB35 978 aa24.19■■□□□ 1.46
PTPN4-202ENST00000420482 CKAP2LQ8IYA6 745 aa24.19■■□□□ 1.46
PTPN4-202ENST00000420482 C17orf80Q9BSJ5 609 aa24.19■■□□□ 1.46
PTPN4-202ENST00000420482 NCOA5Q9HCD5 579 aaKnown RBP24.19■■□□□ 1.46
PTPN4-202ENST00000420482 RWDD3Q9Y3V2 267 aa24.19■■□□□ 1.46
PTPN4-202ENST00000420482 PSAPP07602 524 aa24.18■■□□□ 1.46
PTPN4-202ENST00000420482 CIITAP33076 1130 aa24.18■■□□□ 1.46
PTPN4-202ENST00000420482 EPC2Q52LR7 807 aa24.18■■□□□ 1.46
PTPN4-202ENST00000420482 ODR4Q5SWX8 454 aa24.18■■□□□ 1.46
PTPN4-202ENST00000420482 SWSAP1Q6NVH7 229 aa24.18■■□□□ 1.46
PTPN4-202ENST00000420482 FAM177A1Q8N128 213 aaPredicted RBP24.18■■□□□ 1.46
PTPN4-202ENST00000420482 FIBCD1Q8N539 461 aa24.18■■□□□ 1.46
PTPN4-202ENST00000420482 TRAPPC12Q8WVT3 735 aa24.18■■□□□ 1.46
PTPN4-202ENST00000420482 CELF4Q9BZC1 486 aaKnown RBP24.18■■□□□ 1.46
PTPN4-202ENST00000420482 VPS54Q9P1Q0 977 aa24.18■■□□□ 1.46
PTPN4-202ENST00000420482 SAMM50Q9Y512 469 aa24.18■■□□□ 1.46
PTPN4-202ENST00000420482 PCDHA10Q9Y5I2 948 aa24.18■■□□□ 1.46
PTPN4-202ENST00000420482 DHX15O43143 795 aaKnown RBP24.17■■□□□ 1.46
PTPN4-202ENST00000420482 DEXIO95424 95 aa24.17■■□□□ 1.46
PTPN4-202ENST00000420482 KLRC1P26715 233 aa24.17■■□□□ 1.46
PTPN4-202ENST00000420482 USP11P51784 963 aa24.17■■□□□ 1.46
PTPN4-202ENST00000420482 KCNQ1P51787 676 aa24.17■■□□□ 1.46
PTPN4-202ENST00000420482 PAK2Q13177 524 aa24.17■■□□□ 1.46
PTPN4-202ENST00000420482 TOB2Q14106 344 aaPredicted RBP24.17■■□□□ 1.46
PTPN4-202ENST00000420482 CCDC60Q8IWA6 550 aaPredicted RBP24.17■■□□□ 1.46
PTPN4-202ENST00000420482 TMEM192Q8IY95 271 aa24.17■■□□□ 1.46
PTPN4-202ENST00000420482 BBXQ8WY36 941 aaPredicted RBP24.17■■□□□ 1.46
PTPN4-202ENST00000420482 NECAB3Q96P71 396 aaPredicted RBP24.17■■□□□ 1.46
PTPN4-202ENST00000420482 RNF216Q9NWF9 866 aaPredicted RBP24.17■■□□□ 1.46
PTPN4-202ENST00000420482 CEP131Q9UPN4 1083 aa24.17■■□□□ 1.46
PTPN4-202ENST00000420482 KDM3AQ9Y4C1 1321 aa24.16■■□□□ 1.46
PTPN4-202ENST00000420482 ENPP3O14638 875 aa24.16■■□□□ 1.46
PTPN4-202ENST00000420482 CD52P31358 61 aa24.16■■□□□ 1.46
PTPN4-202ENST00000420482 TMEM62Q0P6H9 643 aa24.16■■□□□ 1.46
PTPN4-202ENST00000420482 PDRG1Q9NUG6 133 aa24.16■■□□□ 1.46
PTPN4-202ENST00000420482 IGSF9BQ9UPX0 1349 aa24.15■■□□□ 1.46
PTPN4-202ENST00000420482 H3BNC9 293 aa24.15■■□□□ 1.46
PTPN4-202ENST00000420482 EIF5BO60841 1220 aaKnown RBP24.15■■□□□ 1.46
PTPN4-202ENST00000420482 PPFIA3O75145 1194 aa24.15■■□□□ 1.46
PTPN4-202ENST00000420482 CDKL5O76039 1030 aa24.15■■□□□ 1.46
PTPN4-202ENST00000420482 STAG3L1P0CL83 205 aa24.15■■□□□ 1.46
PTPN4-202ENST00000420482 GPM6BQ13491 265 aa24.15■■□□□ 1.46
PTPN4-202ENST00000420482 ERICH6BQ5W0A0 696 aa24.15■■□□□ 1.46
PTPN4-202ENST00000420482 GALNT17Q6IS24 598 aa24.15■■□□□ 1.46
PTPN4-202ENST00000420482 RASGRP4Q8TDF6 673 aa24.15■■□□□ 1.46
PTPN4-202ENST00000420482 ZBTB10Q96DT7 871 aa24.15■■□□□ 1.46
PTPN4-202ENST00000420482 MRPL38Q96DV4 380 aaKnown RBP24.15■■□□□ 1.46
PTPN4-202ENST00000420482 FAM167AQ96KS9 214 aa24.15■■□□□ 1.46
PTPN4-202ENST00000420482 UPF3BQ9BZI7 483 aaKnown RBP24.15■■□□□ 1.46
PTPN4-202ENST00000420482 PPP4R2Q9NY27 417 aa24.15■■□□□ 1.46
PTPN4-202ENST00000420482 MAFBQ9Y5Q3 323 aaPredicted RBP24.15■■□□□ 1.46
PTPN4-202ENST00000420482 ADGRA3Q8IWK6 1321 aa24.14■■□□□ 1.46
PTPN4-202ENST00000420482 WDR64B1ANS9 1081 aa24.14■■□□□ 1.45
PTPN4-202ENST00000420482 TIGD5Q53EQ6 642 aa24.14■■□□□ 1.45
PTPN4-202ENST00000420482 PADI3Q9ULW8 664 aa24.14■■□□□ 1.45
PTPN4-202ENST00000420482 PCDHA4Q9UN74 947 aa24.14■■□□□ 1.45
PTPN4-202ENST00000420482 NLRC5Q86WI3 1866 aa24.13■■□□□ 1.45
PTPN4-202ENST00000420482 RB1P06400 928 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms