RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 ZSCAN22P10073 491 aaPredicted RBP23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 QARSP47897 775 aaKnown RBP23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 FXR2P51116 673 aaKnown RBP eCLIP23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 IGBP1P78318 339 aa23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 RBL2Q08999 1139 aa23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 BFSP2Q13515 415 aa23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 PKP1Q13835 747 aa23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 MARCH8Q5T0T0 291 aa23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 PRPF38BQ5VTL8 546 aaKnown RBP23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 FAM173BQ6P4H8 233 aa23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 TRMT1LQ7Z2T5 733 aaKnown RBP23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 CCDC155Q8N6L0 562 aa23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 TRAPPC12Q8WVT3 735 aa23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 WNT8BQ93098 351 aa23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 LBHD1Q9BQE6 289 aaPredicted RBP23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 EIF2AK1Q9BQI3 630 aaKnown RBP23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 TUBE1Q9UJT0 475 aa23.17■■□□□ 1.3
HMGXB4-203ENST00000420166 PITPNM1O00562 1244 aa23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 BMP15O95972 392 aa23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 CYP2C18P33260 490 aa23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 MAGEA10P43363 369 aaPredicted RBP23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 TRIM71Q2Q1W2 868 aaKnown RBP23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 ZNF484Q5JVG2 852 aa23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 FOXD4L5Q5VV16 416 aaPredicted RBP23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 CAGE1Q8TC20 777 aa23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 NEK9Q8TD19 979 aa23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 FOXD4L4Q8WXT5 416 aaPredicted RBP23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 BADQ92934 168 aa23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 DYDC2Q96IM9 177 aa23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 LXNQ9BS40 222 aa23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 NRBP2Q9NSY0 501 aa23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 RGL1Q9NZL6 768 aa23.16■■□□□ 1.3
HMGXB4-203ENST00000420166 ZBTB42B2RXF5 422 aa23.15■■□□□ 1.3
HMGXB4-203ENST00000420166 DKC1O60832 514 aaKnown RBP eCLIP23.15■■□□□ 1.3
HMGXB4-203ENST00000420166 STBD1O95210 358 aa23.15■■□□□ 1.3
HMGXB4-203ENST00000420166 MDM2Q00987 491 aaPredicted RBP23.15■■□□□ 1.3
HMGXB4-203ENST00000420166 CYP4A11Q02928 519 aa23.15■■□□□ 1.3
HMGXB4-203ENST00000420166 XKR3Q5GH77 459 aa23.15■■□□□ 1.3
HMGXB4-203ENST00000420166 HSD17B14Q9BPX1 270 aa23.15■■□□□ 1.3
HMGXB4-203ENST00000420166 WNT8AQ9H1J5 351 aa23.15■■□□□ 1.3
HMGXB4-203ENST00000420166 WRAP73Q9P2S5 460 aaPredicted RBP23.15■■□□□ 1.3
HMGXB4-203ENST00000420166 CEP131Q9UPN4 1083 aa23.15■■□□□ 1.3
HMGXB4-203ENST00000420166 F13A1P00488 732 aa23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 CTTNQ14247 550 aaKnown RBP23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 SF3A1Q15459 793 aaKnown RBP23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 IL17AQ16552 155 aa23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 ARL6IP4Q66PJ3 421 aaKnown RBP23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 MFSD5Q6N075 450 aa23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 TAF2Q6P1X5 1199 aa23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 DTHD1Q6ZMT9 781 aa23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 RUFY4Q6ZNE9 571 aa23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 C4orf19Q8IY42 314 aa23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 ZBTB10Q96DT7 871 aa23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 GDF15Q99988 308 aa23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 RAB34Q9BZG1 259 aa23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 FTOQ9C0B1 505 aaKnown RBP eCLIP23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 ZSWIM4Q9H7M6 989 aa23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 CLIC4Q9Y696 253 aa23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 SCN5AQ14524 2016 aa23.14■■□□□ 1.29
HMGXB4-203ENST00000420166 ARID2Q68CP9 1835 aa23.13■■□□□ 1.29
HMGXB4-203ENST00000420166 SLITRK3O94933 977 aa23.13■■□□□ 1.29
HMGXB4-203ENST00000420166 CKBP12277 381 aa23.13■■□□□ 1.29
HMGXB4-203ENST00000420166 KLRC1P26715 233 aa23.13■■□□□ 1.29
HMGXB4-203ENST00000420166 CCL23P55773 120 aa23.13■■□□□ 1.29
HMGXB4-203ENST00000420166 PDIA5Q14554 519 aa23.13■■□□□ 1.29
HMGXB4-203ENST00000420166 MTHFD1LQ6UB35 978 aa23.13■■□□□ 1.29
HMGXB4-203ENST00000420166 TPH2Q8IWU9 490 aa23.13■■□□□ 1.29
HMGXB4-203ENST00000420166 IGSF22Q8N9C0 903 aa23.13■■□□□ 1.29
HMGXB4-203ENST00000420166 RETREG2Q8NC44 543 aa23.13■■□□□ 1.29
HMGXB4-203ENST00000420166 ERMNQ8TAM6 284 aa23.13■■□□□ 1.29
HMGXB4-203ENST00000420166 NIFKQ9BYG3 293 aaKnown RBP23.13■■□□□ 1.29
HMGXB4-203ENST00000420166 SEPT9Q9UHD8 586 aaPredicted RBP23.13■■□□□ 1.29
HMGXB4-203ENST00000420166 TMEM150BA6NC51 233 aa23.12■■□□□ 1.29
HMGXB4-203ENST00000420166 DDX11L8A8MPP1 907 aa23.12■■□□□ 1.29
HMGXB4-203ENST00000420166 C22orf31O95567 290 aa23.12■■□□□ 1.29
HMGXB4-203ENST00000420166 TARBP2Q15633 366 aaKnown RBP23.12■■□□□ 1.29
HMGXB4-203ENST00000420166 TMEM199Q8N511 208 aa23.12■■□□□ 1.29
HMGXB4-203ENST00000420166 LRWD1Q9UFC0 647 aa23.12■■□□□ 1.29
HMGXB4-203ENST00000420166 PCDHA2Q9Y5H9 948 aa23.12■■□□□ 1.29
HMGXB4-203ENST00000420166 CAND2O75155 1236 aa23.11■■□□□ 1.29
HMGXB4-203ENST00000420166 LYPLA2O95372 231 aa23.11■■□□□ 1.29
HMGXB4-203ENST00000420166 BRD1O95696 1058 aa23.11■■□□□ 1.29
HMGXB4-203ENST00000420166 SPATA31C1P0DKV0 1188 aa23.11■■□□□ 1.29
HMGXB4-203ENST00000420166 SELPP16109 830 aa23.11■■□□□ 1.29
HMGXB4-203ENST00000420166 THPOP40225 353 aa23.11■■□□□ 1.29
HMGXB4-203ENST00000420166 FPGSQ05932 587 aa23.11■■□□□ 1.29
HMGXB4-203ENST00000420166 PTPAQ15257 358 aa23.11■■□□□ 1.29
HMGXB4-203ENST00000420166 ANO5Q75V66 913 aa23.11■■□□□ 1.29
HMGXB4-203ENST00000420166 RPAINQ86UA6 219 aa23.11■■□□□ 1.29
HMGXB4-203ENST00000420166 USP28Q96RU2 1077 aa23.11■■□□□ 1.29
HMGXB4-203ENST00000420166 POLR3CQ9BUI4 534 aaPredicted RBP23.11■■□□□ 1.29
HMGXB4-203ENST00000420166 TUFT1Q9NNX1 390 aa23.11■■□□□ 1.29
HMGXB4-203ENST00000420166 VWA3AA6NCI4 1184 aa23.1■■□□□ 1.29
HMGXB4-203ENST00000420166 MED24O75448 989 aa23.1■■□□□ 1.29
HMGXB4-203ENST00000420166 IQCF3P0C7M6 154 aa23.1■■□□□ 1.29
HMGXB4-203ENST00000420166 CSF2RAP15509 400 aa23.1■■□□□ 1.29
HMGXB4-203ENST00000420166 RPA1P27694 616 aa23.1■■□□□ 1.29
HMGXB4-203ENST00000420166 ANP32AP39687 249 aaKnown RBP23.1■■□□□ 1.29
HMGXB4-203ENST00000420166 MTERF2Q49AM1 385 aa23.1■■□□□ 1.29
HMGXB4-203ENST00000420166 ZNF618Q5T7W0 954 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms