RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 PPP6R2O75170 966 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 TSPY3P0CV98 308 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 TSPY8P0CW00 308 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 U2AF2P26368 475 aaKnown RBP eCLIP8.28□□□□□ -1.08
EPHA4-205ENST00000419964 BTDP43251 543 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 ME1P48163 572 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 KIF23Q02241 960 aaPredicted RBP8.28□□□□□ -1.08
EPHA4-205ENST00000419964 KIF4BQ2VIQ3 1234 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 KRT40Q6A162 431 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 HHIPL2Q6UWX4 724 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 C2CD5Q86YS7 1000 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 TEX11Q8IYF3 940 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 CRACR2BQ8N4Y2 399 aaPredicted RBP8.28□□□□□ -1.08
EPHA4-205ENST00000419964 ENAHQ8N8S7 591 aaPredicted RBP8.28□□□□□ -1.08
EPHA4-205ENST00000419964 ZNF384Q8TF68 577 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 GATAD2BQ8WXI9 593 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 MRPS27Q92552 414 aaKnown RBP8.28□□□□□ -1.08
EPHA4-205ENST00000419964 GAL3ST3Q96A11 431 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 RTFDC1Q9BY42 306 aaPredicted RBP8.28□□□□□ -1.08
EPHA4-205ENST00000419964 VPS33BQ9H267 617 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 SUGCTQ9HAC7 445 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 SWAP70Q9UH65 585 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 PCDHA4Q9UN74 947 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 INPP5FQ9Y2H2 1132 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 MORC2Q9Y6X9 1032 aaPredicted RBP8.28□□□□□ -1.08
EPHA4-205ENST00000419964 MYH15Q9Y2K3 1946 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 MYO3BQ8WXR4 1341 aa8.28□□□□□ -1.08
EPHA4-205ENST00000419964 DLEC1Q9Y238 1755 aa8.27□□□□□ -1.08
EPHA4-205ENST00000419964 WTIPA6NIX2 430 aaPredicted RBP8.27□□□□□ -1.09
EPHA4-205ENST00000419964 SPTLC2O15270 562 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 GREM1O60565 184 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 BPNT1O95861 308 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 MMP1P03956 469 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 HLA-DOAP06340 250 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 GARTP22102 1010 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 CALML3P27482 149 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 ZRSR1Q15695 479 aaKnown RBP8.27□□□□□ -1.09
EPHA4-205ENST00000419964 SOGA3Q5TF21 947 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 ANO1Q5XXA6 986 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 ANKRD34AQ69YU3 496 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 SASS6Q6UVJ0 657 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 BNC2Q6ZN30 1099 aaPredicted RBP8.27□□□□□ -1.09
EPHA4-205ENST00000419964 C16orf86Q6ZW13 317 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 GAS2L3Q86XJ1 694 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 NOSTRINQ8IVI9 506 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 LINC00301Q8NCQ3 95 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 SMG8Q8ND04 991 aaKnown RBP8.27□□□□□ -1.09
EPHA4-205ENST00000419964 SH3RF3Q8TEJ3 882 aaPredicted RBP8.27□□□□□ -1.09
EPHA4-205ENST00000419964 CCDC12Q8WUD4 166 aaPredicted RBP8.27□□□□□ -1.09
EPHA4-205ENST00000419964 NUP133Q8WUM0 1156 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 TEKT1Q969V4 418 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 CAMKK2Q96RR4 588 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 PPP1R9BQ96SB3 815 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 WDR18Q9BV38 432 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 NT5C1AQ9BXI3 368 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 CLSTN2Q9H4D0 955 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 HOOK1Q9UJC3 728 aaKnown RBP8.27□□□□□ -1.09
EPHA4-205ENST00000419964 NOL7Q9UMY1 257 aaKnown RBP8.27□□□□□ -1.09
EPHA4-205ENST00000419964 ANKRD31Q8N7Z5 1873 aa8.27□□□□□ -1.09
EPHA4-205ENST00000419964 NAV1Q8NEY1 1877 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 hCG_1984214I3L0E3 225 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 SMARCA1P28370 1054 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 MMP14P50281 582 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 TFAP4Q01664 338 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 PTPN11Q06124 597 aaPredicted RBP8.26□□□□□ -1.09
EPHA4-205ENST00000419964 TROAPQ12815 778 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 PAK2Q13177 524 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 SLC39A14Q15043 492 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 STRIP1Q5VSL9 837 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 GALNT17Q6IS24 598 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 FDX2Q6P4F2 183 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 RBM43Q6ZSC3 357 aaKnown RBP8.26□□□□□ -1.09
EPHA4-205ENST00000419964 TMTC3Q6ZXV5 915 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 CCAR1Q8IX12 1150 aaKnown RBP8.26□□□□□ -1.09
EPHA4-205ENST00000419964 ZNF713Q8N859 430 aaPredicted RBP8.26□□□□□ -1.09
EPHA4-205ENST00000419964 TGFBRAP1Q8WUH2 860 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 PHKBQ93100 1093 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 ZNF622Q969S3 477 aaKnown RBP eCLIP8.26□□□□□ -1.09
EPHA4-205ENST00000419964 WDR89Q96FK6 387 aaPredicted RBP8.26□□□□□ -1.09
EPHA4-205ENST00000419964 USP28Q96RU2 1077 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 PYM1Q9BRP8 204 aaKnown RBP8.26□□□□□ -1.09
EPHA4-205ENST00000419964 CEP41Q9BYV8 373 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 NAT10Q9H0A0 1025 aaKnown RBP8.26□□□□□ -1.09
EPHA4-205ENST00000419964 DHX36Q9H2U1 1008 aaKnown RBP8.26□□□□□ -1.09
EPHA4-205ENST00000419964 CAPN10Q9HC96 672 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 SH3GLB2Q9NR46 395 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 DACT1Q9NYF0 836 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 C10orf71Q711Q0 1435 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 FLT1P17948 1338 aa8.26□□□□□ -1.09
EPHA4-205ENST00000419964 FAM221AA4D161 298 aa8.25□□□□□ -1.09
EPHA4-205ENST00000419964 CUTAO60888 179 aa8.25□□□□□ -1.09
EPHA4-205ENST00000419964 CILPO75339 1184 aa8.25□□□□□ -1.09
EPHA4-205ENST00000419964 TPM3P06753 285 aa8.25□□□□□ -1.09
EPHA4-205ENST00000419964 CMA1P23946 247 aa8.25□□□□□ -1.09
EPHA4-205ENST00000419964 KRT2P35908 639 aa8.25□□□□□ -1.09
EPHA4-205ENST00000419964 TRAPPC10P48553 1259 aa8.25□□□□□ -1.09
EPHA4-205ENST00000419964 GUCY1B3Q02153 619 aa8.25□□□□□ -1.09
EPHA4-205ENST00000419964 RPL6Q02878 288 aaKnown RBP8.25□□□□□ -1.09
EPHA4-205ENST00000419964 MPP2Q14168 576 aa8.25□□□□□ -1.09
EPHA4-205ENST00000419964 FAM173BQ6P4H8 233 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms