RNA–Protein interactions for RNA: ENST00000418909.6

SHROOM2-202, Transcript of shroom family member 2, humanhuman

TSL 1 (best) BASIC

Gene SHROOM2, Length 4,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-202ENST00000418909 BEST2Q8NFU1 509 aa12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 UPF1Q92900 1129 aaKnown RBP eCLIP12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 SECISBP2LQ93073 1101 aaKnown RBP12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 ERO1AQ96HE7 468 aa12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 GMCL1Q96IK5 515 aa12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 SLIT3O75094 1523 aa12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 GOLGA6L7A0A1B0GV03 622 aa12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 PVALEFA0A1B0GWK0 134 aa12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 KIF11P52732 1056 aa12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 SCYL2Q6P3W7 929 aa12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 EEF2KMTQ96G04 330 aa12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 TIPINQ9BVW5 301 aa12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 IFIH1Q9BYX4 1025 aaKnown RBP12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 TUFT1Q9NNX1 390 aa12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 FANCLQ9NW38 375 aa12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 CPA4Q9UI42 421 aa12.29□□□□□ -0.44
SHROOM2-202ENST00000418909 ESYT2A0FGR8 921 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 GLTPD2A6NH11 291 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 STRNO43815 780 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 CD2BP2O95400 341 aaKnown RBP12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 OATP04181 439 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 FERP16591 822 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 VCAM1P19320 739 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 ARL1P40616 181 aaPredicted RBP12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 PDIA5Q14554 519 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 KYAT1Q16773 422 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 RIT2Q99578 217 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 EIF2AK1Q9BQI3 630 aaKnown RBP12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 ERAP1Q9NZ08 941 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 CWC15Q9P013 229 aaKnown RBP12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 SLC12A6Q9UHW9 1150 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 H2AFZP0C0S5 128 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 H2AFVQ71UI9 128 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 PEX26Q7Z412 305 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 XXYLT1Q8NBI6 393 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 TMEM63CQ9P1W3 806 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 RRN3P2A6NIE6 340 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 PDHXO00330 501 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 CHGBP05060 677 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 HERVK_113P62684 666 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 XPO4Q9C0E2 1151 aaKnown RBP12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 POLR3FQ9H1D9 316 aaPredicted RBP12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 E9PMD0 336 aa12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 COPB1P53618 953 aaKnown RBP12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 MXD4Q14582 209 aaPredicted RBP12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 APOBEC3HQ6NTF7 200 aaKnown RBP12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 PCSK9Q8NBP7 692 aaKnown RBP12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 MKRN1Q9UHC7 482 aaKnown RBP12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 FEZ2Q9UHY8 353 aaPredicted RBP12.28□□□□□ -0.44
SHROOM2-202ENST00000418909 SFI1A8K8P3 1242 aa12.27□□□□□ -0.44
SHROOM2-202ENST00000418909 ONECUT3O60422 494 aaPredicted RBP12.27□□□□□ -0.44
SHROOM2-202ENST00000418909 BFSP1Q12934 665 aa12.27□□□□□ -0.44
SHROOM2-202ENST00000418909 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.44
SHROOM2-202ENST00000418909 TRIM11Q96F44 468 aa12.27□□□□□ -0.44
SHROOM2-202ENST00000418909 PAGE5Q96GU1 130 aa12.27□□□□□ -0.44
SHROOM2-202ENST00000418909 CAPZA3Q96KX2 299 aa12.27□□□□□ -0.44
SHROOM2-202ENST00000418909 SLITRK6Q9H5Y7 841 aa12.27□□□□□ -0.44
SHROOM2-202ENST00000418909 POTEFA5A3E0 1075 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 TUBBP07437 444 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 POTEIP0CG38 1075 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 ABCB4P21439 1286 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 VAV2P52735 878 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 RNASE9P60153 205 aaKnown RBP12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 POTEGQ6S5H5 508 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 POTEEQ6S8J3 1075 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 GPR161Q8N6U8 529 aaKnown RBP12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 RAD54LQ92698 747 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 GPRASP2Q96D09 838 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 TSKSQ9UJT2 592 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 DCDC2CA8MYV0 355 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 SLC16A4O15374 487 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 ASAP2O43150 1006 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 HUS1O60921 280 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 KRT81Q14533 505 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 SFR1Q86XK3 245 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 GMCL1P1Q8NEA9 526 aa12.27□□□□□ -0.45
SHROOM2-202ENST00000418909 HBP1O60381 514 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 KIAA0754O94854 1291 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 ACTN1P12814 892 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 RPS6KA1Q15418 735 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 TEX2Q8IWB9 1127 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 MAP7D3Q8IWC1 876 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 RNF149Q8NC42 400 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 MXRA8Q9BRK3 442 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 WDR70Q9NW82 654 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 COL14A1Q05707 1796 aaKnown RBP12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 A0A1W2PRG0 241 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 TRPA1O75762 1119 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 EYA4O95677 639 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 TSPY1Q01534 308 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 MAP2K1Q02750 393 aaPredicted RBP12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 SIX6OS1Q8N1H7 587 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 PGBD4Q96DM1 585 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 SPATC1LQ9H0A9 340 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 TTLL3Q9Y4R7 772 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 THAP12O43422 761 aa12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 ACTN4O43707 911 aaKnown RBP12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 XRCC6P12956 609 aaKnown RBP eCLIP12.26□□□□□ -0.45
SHROOM2-202ENST00000418909 YWHABP31946 246 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms