RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 IBSPP21815 317 aaPredicted RBP3.67□□□□□ -1.82
VPS41-206ENST00000418457 PTGS1P23219 599 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 CAP1Q01518 475 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 PTPROQ16827 1216 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 SKIDA1Q1XH10 827 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 PRAMEF18Q5VWM3 479 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 ZZZ3Q8IYH5 903 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 DTX3Q8N9I9 347 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 ATL2Q8NHH9 583 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 IGDCC4Q8TDY8 1250 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 ERCC4Q92889 916 aaPredicted RBP3.67□□□□□ -1.82
VPS41-206ENST00000418457 E2F7Q96AV8 911 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 FAM126AQ9BYI3 521 aaPredicted RBP3.67□□□□□ -1.82
VPS41-206ENST00000418457 EMC7Q9NPA0 242 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 PCDH12Q9NPG4 1184 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 TOMM22Q9NS69 142 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 SPTLC3Q9NUV7 552 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 UCKL1Q9NWZ5 548 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 BTBD7Q9P203 1132 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 ARHGAP20Q9P2F6 1191 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 MCM8Q9UJA3 840 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 CROTQ9UKG9 612 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 APOBEC2Q9Y235 224 aaKnown RBP3.67□□□□□ -1.82
VPS41-206ENST00000418457 COL4A3BPQ9Y5P4 624 aa3.67□□□□□ -1.82
VPS41-206ENST00000418457 GOLGA6L22H0YM25 854 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 TGM5O43548 720 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 NUAK1O60285 661 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 CYP7B1O75881 506 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 FBXO21O94952 628 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 PTX3P26022 381 aaPredicted RBP3.66□□□□□ -1.82
VPS41-206ENST00000418457 MC4RP32245 332 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 THBS2P35442 1172 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 ID4P47928 161 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 GLRBP48167 497 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 AFF3P51826 1226 aaKnown RBP3.66□□□□□ -1.82
VPS41-206ENST00000418457 AMPD3Q01432 767 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 ADCY1Q08828 1119 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 STAT4Q14765 748 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 EPHA7Q15375 998 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 ATP13A4Q4VNC1 1196 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 PHF19Q5T6S3 580 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 CIAPIN1Q6FI81 312 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 TTLL7Q6ZT98 887 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 SAPCD2Q86UD0 394 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 NME9Q86XW9 330 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 TMEM151BQ8IW70 566 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 WDR48Q8TAF3 677 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 WDR66Q8TBY9 1149 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 DACT3Q96B18 629 aaPredicted RBP3.66□□□□□ -1.82
VPS41-206ENST00000418457 C16orf92Q96LL3 132 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 BRINP2Q9C0B6 783 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 INCENPQ9NQS7 918 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 GALNT8Q9NY28 637 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 ZFP69BQ9UJL9 534 aa3.66□□□□□ -1.82
VPS41-206ENST00000418457 BICRAQ9NZM4 1560 aa3.65□□□□□ -1.82
VPS41-206ENST00000418457 UBA6A0AVT1 1052 aaPredicted RBP3.65□□□□□ -1.83
VPS41-206ENST00000418457 ULK1O75385 1050 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 EYA4O95677 639 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 MPIG6BO95866 241 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 CENPBP07199 599 aaPredicted RBP3.65□□□□□ -1.83
VPS41-206ENST00000418457 POU3F3P20264 500 aaPredicted RBP3.65□□□□□ -1.83
VPS41-206ENST00000418457 CD40P25942 277 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 LSP1P33241 339 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 TMPRSS15P98073 1019 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 DDB1Q16531 1140 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 VWA3BQ502W6 1294 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 TCERG1LQ5VWI1 586 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 RNF219Q5W0B1 726 aaPredicted RBP3.65□□□□□ -1.83
VPS41-206ENST00000418457 ESRP1Q6NXG1 681 aaKnown RBP3.65□□□□□ -1.83
VPS41-206ENST00000418457 DPP8Q6V1X1 898 aaPredicted RBP3.65□□□□□ -1.83
VPS41-206ENST00000418457 RTN4RL1Q86UN2 441 aaPredicted RBP3.65□□□□□ -1.83
VPS41-206ENST00000418457 DDX42Q86XP3 938 aaKnown RBP eCLIP3.65□□□□□ -1.83
VPS41-206ENST00000418457 CILP2Q8IUL8 1156 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 CALML6Q8TD86 181 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 ZNF526Q8TF50 670 aaPredicted RBP3.65□□□□□ -1.83
VPS41-206ENST00000418457 SLC5A5Q92911 643 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 FOXRED1Q96CU9 486 aaPredicted RBP3.65□□□□□ -1.83
VPS41-206ENST00000418457 GPATCH3Q96I76 525 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 TOX2Q96NM4 488 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 TACO1Q9BSH4 297 aaKnown RBP3.65□□□□□ -1.83
VPS41-206ENST00000418457 IRF2BPLQ9H1B7 796 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 ZMAT4Q9H898 229 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 SPATA6Q9NWH7 488 aaPredicted RBP3.65□□□□□ -1.83
VPS41-206ENST00000418457 NTMQ9P121 344 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 ATP8A1Q9Y2Q0 1164 aa3.65□□□□□ -1.83
VPS41-206ENST00000418457 UNC13AQ9UPW8 1703 aa3.64□□□□□ -1.83
VPS41-206ENST00000418457 RSF1Q96T23 1441 aaPredicted RBP3.64□□□□□ -1.83
VPS41-206ENST00000418457 hCG_2014768A0A024R1R8 64 aa3.64□□□□□ -1.83
VPS41-206ENST00000418457 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.64□□□□□ -1.83
VPS41-206ENST00000418457 SH3D21A4FU49 640 aa3.64□□□□□ -1.83
VPS41-206ENST00000418457 DBX1A6NMT0 343 aa3.64□□□□□ -1.83
VPS41-206ENST00000418457 GPR39O43194 453 aa3.64□□□□□ -1.83
VPS41-206ENST00000418457 RAB11FIP3O75154 756 aa3.64□□□□□ -1.83
VPS41-206ENST00000418457 IL18BPO95998 194 aa3.64□□□□□ -1.83
VPS41-206ENST00000418457 PRLP01236 227 aa3.64□□□□□ -1.83
VPS41-206ENST00000418457 RPL13P26373 211 aaKnown RBP3.64□□□□□ -1.83
VPS41-206ENST00000418457 ECE1P42892 770 aa3.64□□□□□ -1.83
VPS41-206ENST00000418457 PHC1P78364 1004 aa3.64□□□□□ -1.83
VPS41-206ENST00000418457 SMAD3P84022 425 aaKnown RBP3.64□□□□□ -1.83
VPS41-206ENST00000418457 ALDH6A1Q02252 535 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms