RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 SAFBQ15424 915 aaKnown RBP eCLIP11.9□□□□□ -0.5
RFC1-203ENST00000418436 LETM2Q2VYF4 491 aa11.9□□□□□ -0.5
RFC1-203ENST00000418436 UTP14CQ5TAP6 766 aaKnown RBP11.9□□□□□ -0.5
RFC1-203ENST00000418436 GDF6Q6KF10 455 aaPredicted RBP11.9□□□□□ -0.5
RFC1-203ENST00000418436 ZNF746Q6NUN9 644 aaPredicted RBP11.9□□□□□ -0.5
RFC1-203ENST00000418436 B3GNT9Q6UX72 402 aa11.9□□□□□ -0.5
RFC1-203ENST00000418436 PLPPR4Q7Z2D5 763 aa11.9□□□□□ -0.5
RFC1-203ENST00000418436 TRIM50Q86XT4 487 aa11.9□□□□□ -0.5
RFC1-203ENST00000418436 C7orf31Q8N865 590 aa11.9□□□□□ -0.5
RFC1-203ENST00000418436 ETNPPLQ8TBG4 499 aa11.9□□□□□ -0.5
RFC1-203ENST00000418436 BADQ92934 168 aa11.9□□□□□ -0.5
RFC1-203ENST00000418436 UIMC1Q96RL1 719 aa11.9□□□□□ -0.5
RFC1-203ENST00000418436 NAP1L4Q99733 375 aaKnown RBP11.9□□□□□ -0.5
RFC1-203ENST00000418436 NOC4LQ9BVI4 516 aaKnown RBP11.9□□□□□ -0.5
RFC1-203ENST00000418436 FOXP1Q9H334 677 aaPredicted RBP11.9□□□□□ -0.5
RFC1-203ENST00000418436 SMARCAD1Q9H4L7 1026 aa11.9□□□□□ -0.5
RFC1-203ENST00000418436 KCNMB3Q9NPA1 279 aa11.9□□□□□ -0.5
RFC1-203ENST00000418436 NPDC1Q9NQX5 325 aaPredicted RBP11.9□□□□□ -0.5
RFC1-203ENST00000418436 DDX25Q9UHL0 483 aaKnown RBP11.9□□□□□ -0.5
RFC1-203ENST00000418436 ZNF215Q9UL58 517 aaPredicted RBP11.9□□□□□ -0.5
RFC1-203ENST00000418436 KIF3AQ9Y496 699 aa11.9□□□□□ -0.5
RFC1-203ENST00000418436 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.9□□□□□ -0.5
RFC1-203ENST00000418436 DDX39AO00148 427 aaKnown RBP11.89□□□□□ -0.51
RFC1-203ENST00000418436 SLC37A4O43826 429 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 CCNT1O60563 726 aaKnown RBP11.89□□□□□ -0.51
RFC1-203ENST00000418436 PSMD10O75832 226 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 SMIM10L2AP0DMW4 78 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 SMIM10L2BP0DMW5 78 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 GJB2P29033 226 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 CHMP4BP1P59074 171 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 ADAM17P78536 824 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 MDM2Q00987 491 aaPredicted RBP11.89□□□□□ -0.51
RFC1-203ENST00000418436 KRT76Q01546 638 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 PTGISQ16647 500 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 MFSD5Q6N075 450 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 SMAP1Q8IYB5 467 aaPredicted RBP11.89□□□□□ -0.51
RFC1-203ENST00000418436 AFAP1L1Q8TED9 768 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 SNX21Q969T3 373 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 LBHD1Q9BQE6 289 aaPredicted RBP11.89□□□□□ -0.51
RFC1-203ENST00000418436 RNPEPQ9H4A4 650 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 ERAP1Q9NZ08 941 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 TANC1Q9C0D5 1861 aa11.89□□□□□ -0.51
RFC1-203ENST00000418436 TBX3O15119 743 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 GAS7O60861 476 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 CYP2C9P11712 490 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 U2AF2P26368 475 aaKnown RBP eCLIP11.88□□□□□ -0.51
RFC1-203ENST00000418436 SLC26A2P50443 739 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 STAT5BP51692 787 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 RBL2Q08999 1139 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 LRCH2Q5VUJ6 765 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 HAS1Q92839 578 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 GLG1Q92896 1179 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 GJA10Q969M2 543 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 FAM20AQ96MK3 541 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 TEKT3Q9BXF9 490 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 HIPK3Q9H422 1215 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 SMC3Q9UQE7 1217 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 PCDHA10Q9Y5I2 948 aa11.88□□□□□ -0.51
RFC1-203ENST00000418436 UMODL1Q5DID0 1318 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 NRCAMQ92823 1304 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 A0A1W2PPC1 479 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 C17orf102A2RUQ5 167 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 KIF28PB7ZC32 967 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 K7ELQ4 463 aaPredicted RBP11.87□□□□□ -0.51
RFC1-203ENST00000418436 WNT7AO00755 349 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 SFNP31947 248 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 CYP2C18P33260 490 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 ZNF200P98182 395 aaPredicted RBP11.87□□□□□ -0.51
RFC1-203ENST00000418436 PTK7Q13308 1070 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 PLCB4Q15147 1175 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 MIS18BP1Q6P0N0 1132 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 SERINC5Q86VE9 423 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 NOSTRINQ8IVI9 506 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 CCDC60Q8IWA6 550 aaPredicted RBP11.87□□□□□ -0.51
RFC1-203ENST00000418436 TTC13Q8NBP0 860 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 RDM1Q8NG50 284 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 DHX38Q92620 1227 aaKnown RBP11.87□□□□□ -0.51
RFC1-203ENST00000418436 INTS4Q96HW7 963 aaKnown RBP11.87□□□□□ -0.51
RFC1-203ENST00000418436 PPP1R12CQ9BZL4 782 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 WNT8AQ9H1J5 351 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 UNC45AQ9H3U1 944 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 AZI2Q9H6S1 392 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 SETD4Q9NVD3 440 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 NOD1Q9Y239 953 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 MAFBQ9Y5Q3 323 aaPredicted RBP11.87□□□□□ -0.51
RFC1-203ENST00000418436 SCN5AQ14524 2016 aa11.87□□□□□ -0.51
RFC1-203ENST00000418436 WDR64B1ANS9 1081 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 TREHO43280 583 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 PSAPP07602 524 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 GNAT1P11488 350 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 ATP4AP20648 1035 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 MARK3P27448 753 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 JAK3P52333 1124 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 EPHB4P54760 987 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 FPGSQ05932 587 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 PPP2R5CQ13362 524 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 ORC2Q13416 577 aaPredicted RBP11.86□□□□□ -0.51
RFC1-203ENST00000418436 BFSP2Q13515 415 aa11.86□□□□□ -0.51
RFC1-203ENST00000418436 TRIM71Q2Q1W2 868 aaKnown RBP11.86□□□□□ -0.51
RFC1-203ENST00000418436 FAM160B1Q5W0V3 765 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms