RNA–Protein interactions for RNA: ENST00000418378.5

SPARCL1-202, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SPARCL1, Length 2,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-202ENST00000418378 CCP110O43303 1012 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 POLR2MP0CAP2 368 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 TMEM266Q2M3C6 531 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 C11orf91Q3C1V1 193 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 SEPT14Q6ZU15 432 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 FAM83AQ86UY5 434 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 PLA2G4DQ86XP0 818 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 ANKRD35Q8N283 1001 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 DCAF4Q8WV16 495 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 TSC1Q92574 1164 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 HAS1Q92839 578 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 TBC1D20Q96BZ9 403 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 CALML4Q96GE6 196 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 PCMTD1Q96MG8 357 aaPredicted RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 RIC8AQ9NPQ8 531 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 HPSEQ9Y251 543 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 RSPH10B2B2RC85 870 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 EML1O00423 815 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 USP2O75604 605 aaPredicted RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 RSPH10BP0C881 870 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 GNALP38405 381 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 MLLT3P42568 568 aaPredicted RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 RCAN1P53805 252 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 PMS1P54277 932 aaKnown RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 ADKP55263 362 aaKnown RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 UBASH3AP57075 661 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 DCAF15Q66K64 600 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 SCYL3Q8IZE3 742 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 RDH13Q8NBN7 331 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 GABPB2Q8TAK5 448 aaPredicted RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 ELMO3Q96BJ8 720 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 KLRG1Q96E93 195 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 RMDN3Q96TC7 470 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 FGFBP2Q9BYJ0 223 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 TRIM6Q9C030 488 aaPredicted RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 NAT10Q9H0A0 1025 aaKnown RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 BHMT2Q9H2M3 363 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 RNF146Q9NTX7 359 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 TAB2Q9NYJ8 693 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 PYCARDQ9ULZ3 195 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 CEP290O15078 2479 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 ANKRD33BA6NCL7 494 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 M0R2N6 131 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 SLFN14P0C7P3 912 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 STIP1P31948 543 aaKnown RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 PIK3CAP42336 1068 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 CDR1P51861 262 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 BACE1P56817 501 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 NLRP12P59046 1061 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 ZNF280AP59817 542 aaPredicted RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 STK4Q13043 487 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 IQCB1Q15051 598 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 GJC2Q5T442 439 aaPredicted RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 ATL3Q6DD88 541 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 LCA5Q86VQ0 697 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 SAMD14Q8IZD0 417 aaPredicted RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 C4orf32Q8N8J7 132 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 CCDC89Q8N998 374 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 FERMT2Q96AC1 680 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 ZBTB10Q96DT7 871 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 CDCA5Q96FF9 252 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 WDR18Q9BV38 432 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 AVENQ9NQS1 362 aaPredicted RBP6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 CLIC5Q9NZA1 410 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 CCDC39Q9UFE4 941 aa6.3□□□□□ -1.4
SPARCL1-202ENST00000418378 SIPA1L1O43166 1804 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 MYH15Q9Y2K3 1946 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 GRXCR2A6NFK2 248 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 MSH4O15457 936 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 TEX33O43247 280 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 CTNND1O60716 968 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 GAS7O60861 476 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 MED24O75448 989 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 RPS12P25398 132 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 PRCPP42785 496 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 FKBP1AP62942 108 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 KMT5BQ4FZB7 885 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 ARHGEF16Q5VV41 709 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 ZNF449Q6P9G9 518 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 CHPFQ8IZ52 775 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 SH3KBP1Q96B97 665 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 FAM84AQ96KN4 292 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 TRIM47Q96LD4 638 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 C16orf45Q96MC5 204 aaPredicted RBP6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 CCDC43Q96MW1 224 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 ZNF577Q9BSK1 485 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 MMTAG2Q9BU76 263 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 MRIQ9BWK5 157 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 MED4Q9NPJ6 270 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 ADARB2Q9NS39 739 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 COMMD8Q9NX08 183 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 HOOK1Q9UJC3 728 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 DOCK3Q8IZD9 2030 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 ATP9AO75110 1047 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 CELF2O95319 508 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 RPN1P04843 607 aaKnown RBP6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 MARK3P27448 753 aa6.29□□□□□ -1.4
SPARCL1-202ENST00000418378 DNAJA1P31689 397 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms