RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 OR6B2Q6IFH4 312 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 TMC4Q7Z404 712 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 ARHGEF25Q86VW2 580 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 ARL8AQ96BM9 186 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 CYP4F11Q9HBI6 524 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 ZNF711Q9Y462 761 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 FGFR4P22455 802 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 NCAPG2Q86XI2 1143 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 CRLF3Q8IUI8 442 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 IL17RAQ96F46 866 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 IQANK1A0A1B0GTG1 560 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 HSPA4LO95757 839 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 THOC5Q13769 683 aaKnown RBP12.95□□□□□ -0.34
UBR4-205ENST00000417040 CENPUQ71F23 418 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 RIN2Q8WYP3 895 aaPredicted RBP12.95□□□□□ -0.34
UBR4-205ENST00000417040 FAM149B1Q96BN6 582 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 TMEM60Q9H2L4 133 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 STK17AQ9UEE5 414 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 DNAJC8O75937 253 aaPredicted RBP12.95□□□□□ -0.34
UBR4-205ENST00000417040 TRAPPC10P48553 1259 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 BRDTQ58F21 947 aaPredicted RBP12.95□□□□□ -0.34
UBR4-205ENST00000417040 FAM47CQ5HY64 1035 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 ANKRD36BP1Q96IX9 119 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 COPRSQ9NQ92 184 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 TRIM10Q9UDY6 481 aa12.95□□□□□ -0.34
UBR4-205ENST00000417040 ENO4A6NNW6 628 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 TRIM67Q6ZTA4 783 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 FMR1NBQ8N0W7 255 aaPredicted RBP12.94□□□□□ -0.34
UBR4-205ENST00000417040 PIGOQ8TEQ8 1089 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 TRPC5Q9UL62 973 aaPredicted RBP12.94□□□□□ -0.34
UBR4-205ENST00000417040 EIF4G3O43432 1585 aaKnown RBP12.94□□□□□ -0.34
UBR4-205ENST00000417040 ZNF18P17022 549 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 ZNF394Q53GI3 561 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 SYCP2LQ5T4T6 812 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 CCHCR1Q8TD31 782 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 CPVLQ9H3G5 476 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 IPO11Q9UI26 975 aaKnown RBP12.94□□□□□ -0.34
UBR4-205ENST00000417040 H0YIN7 160 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 PRPF3O43395 683 aaKnown RBP12.94□□□□□ -0.34
UBR4-205ENST00000417040 PCCAP05165 728 aaPredicted RBP12.94□□□□□ -0.34
UBR4-205ENST00000417040 RWDD2BP57060 319 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
UBR4-205ENST00000417040 IQCB1Q15051 598 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 ATG16L1Q676U5 607 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 SRLQ86TD4 932 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 LRRC1Q9BTT6 524 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 ETNK1Q9HBU6 452 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 SMARCAL1Q9NZC9 954 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.94□□□□□ -0.34
UBR4-205ENST00000417040 YWHAHQ04917 246 aaPredicted RBP12.94□□□□□ -0.34
UBR4-205ENST00000417040 ABCB5Q2M3G0 1257 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 AGR3Q8TD06 166 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 EFHD1Q9BUP0 239 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 TRIM55Q9BYV6 548 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 DNAJC12Q9UKB3 198 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 KIAA0556O60303 1618 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 POLD1P28340 1107 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 USP14P54578 494 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 AOC3Q16853 763 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 STRIP2Q9ULQ0 834 aa12.94□□□□□ -0.34
UBR4-205ENST00000417040 ZNF521Q96K83 1311 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 CLRN2A0PK11 232 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 COPEO14579 308 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 CSPG5O95196 566 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 LMNAP02545 664 aaKnown RBP12.93□□□□□ -0.34
UBR4-205ENST00000417040 GAP43P17677 238 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 GADL1Q6ZQY3 521 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 ALKBH8Q96BT7 664 aaKnown RBP12.93□□□□□ -0.34
UBR4-205ENST00000417040 SERPINI1Q99574 410 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 ZNF277Q9NRM2 450 aaPredicted RBP12.93□□□□□ -0.34
UBR4-205ENST00000417040 PPIP5K2O43314 1243 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 HSPA2P54652 639 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 BPIFB4P59827 614 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 OCRLQ01968 901 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 NKX1-1Q15270 411 aaPredicted RBP12.93□□□□□ -0.34
UBR4-205ENST00000417040 CAPRIN2Q6IMN6 1127 aaKnown RBP12.93□□□□□ -0.34
UBR4-205ENST00000417040 TBC1D10CQ8IV04 446 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 ATP6V1G3Q96LB4 118 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 GPR101Q96P66 508 aaPredicted RBP12.93□□□□□ -0.34
UBR4-205ENST00000417040 OLA1Q9NTK5 396 aaKnown RBP12.93□□□□□ -0.34
UBR4-205ENST00000417040 KIF28PB7ZC32 967 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 TLR3O15455 904 aaKnown RBP12.93□□□□□ -0.34
UBR4-205ENST00000417040 NMT2O60551 498 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 CHGBP05060 677 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 TRIM11Q96F44 468 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 ADGRG1Q9Y653 693 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 POTEMA6NI47 508 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 PP2D1A8MPX8 630 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 DTX3LQ8TDB6 740 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 HEXIM2Q96MH2 286 aaKnown RBP12.93□□□□□ -0.34
UBR4-205ENST00000417040 SLC13A1Q9BZW2 595 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 ANAPC7Q9UJX3 599 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 FBXL5Q9UKA1 691 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 AKT3Q9Y243 479 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 CFAP69A5D8W1 941 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 LRRC36Q1X8D7 754 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 ZNF746Q6NUN9 644 aaPredicted RBP12.93□□□□□ -0.34
UBR4-205ENST00000417040 IRAK4Q9NWZ3 460 aa12.93□□□□□ -0.34
UBR4-205ENST00000417040 WARS2Q9UGM6 360 aaKnown RBP12.93□□□□□ -0.34
UBR4-205ENST00000417040 BCS1LQ9Y276 419 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms