RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 ASGR2P07307 311 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 STAG3L1P0CL83 205 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 INSRRP14616 1297 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 MFAP1P55081 439 aaKnown RBP10.78□□□□□ -0.68
LINC01238-201ENST00000416204 NFX1Q12986 1120 aaKnown RBP10.78□□□□□ -0.68
LINC01238-201ENST00000416204 GRM4Q14833 912 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 IMMTQ16891 758 aaKnown RBP10.78□□□□□ -0.68
LINC01238-201ENST00000416204 NAALADL2Q58DX5 795 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 B4GALNT3Q6L9W6 998 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 SYCE2Q6PIF2 218 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 SMARCC2Q8TAQ2 1214 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 KRT23Q9C075 422 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 S1PR5Q9H228 398 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 DIAPH3Q9NSV4 1193 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 PCDHB12Q9Y5F1 795 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 TRPV2Q9Y5S1 764 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 FRMPD4Q14CM0 1322 aa10.78□□□□□ -0.68
LINC01238-201ENST00000416204 DNAH14Q0VDD8 3507 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 PNMA6FA0A0J9YX94 578 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 MBLAC1A4D2B0 266 aaPredicted RBP10.77□□□□□ -0.69
LINC01238-201ENST00000416204 C2CD4DB7Z1M9 353 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 FGFR1P11362 822 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 KCNA2P16389 499 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 ATF7P17544 494 aaPredicted RBP10.77□□□□□ -0.69
LINC01238-201ENST00000416204 PCNX4Q63HM2 1172 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 ANKRD54Q6NXT1 300 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 KANK3Q6NY19 840 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 NLRX1Q86UT6 975 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 ADSSL1Q8N142 457 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 FEZF2Q8TBJ5 459 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 SEPT1Q8WYJ6 367 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 PCYT2Q99447 389 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 IL25Q9H293 177 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 RIOX1Q9H6W3 641 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 CDHR5Q9HBB8 845 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 ENTPD7Q9NQZ7 604 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 TYW1Q9NV66 732 aaKnown RBP10.77□□□□□ -0.69
LINC01238-201ENST00000416204 ERAP1Q9NZ08 941 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 PCDHB7Q9Y5E2 793 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 RIF1Q5UIP0 2472 aaKnown RBP10.77□□□□□ -0.69
LINC01238-201ENST00000416204 LAMA4Q16363 1823 aa10.77□□□□□ -0.69
LINC01238-201ENST00000416204 M0QZ92 97 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 IFIT3O14879 490 aaKnown RBP10.76□□□□□ -0.69
LINC01238-201ENST00000416204 STAM2O75886 525 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 ITGB5P18084 799 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 CA8P35219 290 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 FOXK2Q01167 660 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 PLCB4Q15147 1175 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 UBE2SQ16763 222 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 IER5Q5VY09 327 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 C12orf76Q8N812 135 aaPredicted RBP10.76□□□□□ -0.69
LINC01238-201ENST00000416204 COLGALT1Q8NBJ5 622 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 TCF25Q9BQ70 676 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 SENP7Q9BQF6 1050 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 MYL10Q9BUA6 226 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 FTHL17Q9BXU8 183 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 CELF4Q9BZC1 486 aaKnown RBP10.76□□□□□ -0.69
LINC01238-201ENST00000416204 POMKQ9H5K3 350 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 NOC2LQ9Y3T9 749 aaKnown RBP10.76□□□□□ -0.69
LINC01238-201ENST00000416204 TAF6LQ9Y6J9 622 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 IGSF9BQ9UPX0 1349 aa10.76□□□□□ -0.69
LINC01238-201ENST00000416204 hCG_1642624A0A1W2PR95 340 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 DENND3A2RUS2 1198 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 PROB1E7EW31 1015 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 MEIS2O14770 477 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 FSCN2O14926 492 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 NBL1P41271 181 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 ID4P47928 161 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 SARSP49591 514 aaKnown RBP10.75□□□□□ -0.69
LINC01238-201ENST00000416204 KRT76Q01546 638 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 MTMR3Q13615 1198 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 CMTR1Q8N1G2 835 aaKnown RBP10.75□□□□□ -0.69
LINC01238-201ENST00000416204 SAMD3Q8N6K7 520 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 FLCNQ8NFG4 579 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 TMEM40Q8WWA1 233 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 CUL5Q93034 780 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 ADAM2Q99965 735 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 IRF2BPLQ9H1B7 796 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 MFSD1Q9H3U5 465 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 SMARCAD1Q9H4L7 1026 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 CNNM2Q9H8M5 875 aa10.75□□□□□ -0.69
LINC01238-201ENST00000416204 SRGAP2BP0DMP2 458 aa10.74□□□□□ -0.69
LINC01238-201ENST00000416204 MTMR1Q13613 665 aa10.74□□□□□ -0.69
LINC01238-201ENST00000416204 ASTLQ6HA08 431 aaPredicted RBP10.74□□□□□ -0.69
LINC01238-201ENST00000416204 TRMT1LQ7Z2T5 733 aaKnown RBP10.74□□□□□ -0.69
LINC01238-201ENST00000416204 RAB11FIP4Q86YS3 637 aa10.74□□□□□ -0.69
LINC01238-201ENST00000416204 RNF169Q8NCN4 708 aa10.74□□□□□ -0.69
LINC01238-201ENST00000416204 NKD2Q969F2 451 aaPredicted RBP10.74□□□□□ -0.69
LINC01238-201ENST00000416204 CDCA3Q99618 268 aaPredicted RBP10.74□□□□□ -0.69
LINC01238-201ENST00000416204 DSCC1Q9BVC3 393 aa10.74□□□□□ -0.69
LINC01238-201ENST00000416204 CWH43Q9H720 699 aa10.74□□□□□ -0.69
LINC01238-201ENST00000416204 ERVK-5Q9HDB9 667 aa10.74□□□□□ -0.69
LINC01238-201ENST00000416204 AAASQ9NRG9 546 aa10.74□□□□□ -0.69
LINC01238-201ENST00000416204 LIMD1Q9UGP4 676 aa10.74□□□□□ -0.69
LINC01238-201ENST00000416204 SORCS3Q9UPU3 1222 aa10.74□□□□□ -0.69
LINC01238-201ENST00000416204 KAT6AQ92794 2004 aa10.74□□□□□ -0.69
LINC01238-201ENST00000416204 RRN3P2A6NIE6 340 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 DDX39AO00148 427 aaKnown RBP10.73□□□□□ -0.69
LINC01238-201ENST00000416204 PI15O43692 258 aa10.73□□□□□ -0.69
LINC01238-201ENST00000416204 RPS6KA5O75582 802 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms