RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 FBXO22Q8NEZ5 403 aa19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 FAM49AQ9H0Q0 323 aaPredicted RBP19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 SH3GLB2Q9NR46 395 aa19.98■□□□□ 0.79
PDLIM2-208ENST00000416159 TTC28Q96AY4 2481 aa19.97■□□□□ 0.79
PDLIM2-208ENST00000416159 SMIM35A0A1B0GVV1 85 aa19.97■□□□□ 0.79
PDLIM2-208ENST00000416159 CIITAP33076 1130 aa19.97■□□□□ 0.79
PDLIM2-208ENST00000416159 MTHFD1LQ6UB35 978 aa19.97■□□□□ 0.79
PDLIM2-208ENST00000416159 TRIM22Q8IYM9 498 aa19.97■□□□□ 0.79
PDLIM2-208ENST00000416159 TRAPPC12Q8WVT3 735 aa19.97■□□□□ 0.79
PDLIM2-208ENST00000416159 ZNF274Q96GC6 653 aaPredicted RBP19.97■□□□□ 0.79
PDLIM2-208ENST00000416159 C17orf80Q9BSJ5 609 aa19.97■□□□□ 0.79
PDLIM2-208ENST00000416159 NCOA5Q9HCD5 579 aaKnown RBP19.97■□□□□ 0.79
PDLIM2-208ENST00000416159 ZNF302Q9NR11 478 aa19.97■□□□□ 0.79
PDLIM2-208ENST00000416159 TRPV2Q9Y5S1 764 aa19.97■□□□□ 0.79
PDLIM2-208ENST00000416159 TNFRSF10AO00220 468 aa19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 ENPP3O14638 875 aa19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 PPFIA3O75145 1194 aa19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 SSRP1Q08945 709 aaKnown RBP19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 ZNF746Q6NUN9 644 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 PDXDC2PQ6P474 469 aa19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 RASGRP4Q8TDF6 673 aa19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 ADAMTS19Q8TE59 1207 aa19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 ATP8B4Q8TF62 1192 aa19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 ZBTB10Q96DT7 871 aa19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 IL17RAQ96F46 866 aa19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 VPS54Q9P1Q0 977 aa19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 TCEAL9Q9UHQ7 104 aa19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 COL4A4P53420 1690 aaPredicted RBP19.96■□□□□ 0.79
PDLIM2-208ENST00000416159 CPLX1O14810 134 aa19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 KLRC1P26715 233 aa19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 NLRP5P59047 1200 aa19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 KRT76Q01546 638 aa19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 EPC2Q52LR7 807 aa19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 PRR16Q569H4 304 aa19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 ZNF484Q5JVG2 852 aa19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 SWSAP1Q6NVH7 229 aa19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 CCDC60Q8IWA6 550 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 SMAP1Q8IYB5 467 aaPredicted RBP19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 HLA-CQ95604 372 aa19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 CELF4Q9BZC1 486 aaKnown RBP19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 KDM3AQ9Y4C1 1321 aa19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 TTC3P53804 2025 aa19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 COL1A2P08123 1366 aa19.95■□□□□ 0.78
PDLIM2-208ENST00000416159 MYH9P35579 1960 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 DEXIO95424 95 aa19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 PSAPP07602 524 aa19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 BMP1P13497 986 aa19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 USP11P51784 963 aa19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 TFF2Q03403 129 aa19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 CPLX2Q6PUV4 134 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 TMEM192Q8IY95 271 aa19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 UIMC1Q96RL1 719 aa19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 FTHL17Q9BXU8 183 aa19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 C22orf23Q9BZE7 217 aa19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 AGO3Q9H9G7 860 aaKnown RBP19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 PDRG1Q9NUG6 133 aa19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 PCDHA10Q9Y5I2 948 aa19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 MAFBQ9Y5Q3 323 aaPredicted RBP19.94■□□□□ 0.78
PDLIM2-208ENST00000416159 H3BNC9 293 aa19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 CD52P31358 61 aa19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 TMEM62Q0P6H9 643 aa19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 PTPROQ16827 1216 aa19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 FAM43BQ6ZT52 329 aaPredicted RBP19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 FAM177A1Q8N128 213 aaPredicted RBP19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 FIBCD1Q8N539 461 aa19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 BBXQ8WY36 941 aaPredicted RBP19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 UHRF1Q96T88 793 aaPredicted RBP19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 UPF3BQ9BZI7 483 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 PPP4R2Q9NY27 417 aa19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 TCF20Q9UGU0 1960 aaKnown RBP19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 IGSF9BQ9UPX0 1349 aa19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 COL4A6Q14031 1691 aa19.93■□□□□ 0.78
PDLIM2-208ENST00000416159 ATP4AP20648 1035 aa19.92■□□□□ 0.78
PDLIM2-208ENST00000416159 GPM6BQ13491 265 aa19.92■□□□□ 0.78
PDLIM2-208ENST00000416159 ERICH6BQ5W0A0 696 aa19.92■□□□□ 0.78
PDLIM2-208ENST00000416159 CKAP2LQ8IYA6 745 aa19.92■□□□□ 0.78
PDLIM2-208ENST00000416159 LENG9Q96B70 501 aa19.92■□□□□ 0.78
PDLIM2-208ENST00000416159 MRPL38Q96DV4 380 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-208ENST00000416159 LARP6Q9BRS8 491 aaKnown RBP19.92■□□□□ 0.78
PDLIM2-208ENST00000416159 PADI3Q9ULW8 664 aa19.92■□□□□ 0.78
PDLIM2-208ENST00000416159 PCDHA4Q9UN74 947 aa19.92■□□□□ 0.78
PDLIM2-208ENST00000416159 RWDD3Q9Y3V2 267 aa19.92■□□□□ 0.78
PDLIM2-208ENST00000416159 LOXHD1Q8IVV2 1947 aa19.92■□□□□ 0.78
PDLIM2-208ENST00000416159 NCOR1O75376 2440 aa19.92■□□□□ 0.78
PDLIM2-208ENST00000416159 EVPLQ92817 2033 aa19.92■□□□□ 0.78
PDLIM2-208ENST00000416159 TRANK1O15050 2925 aa19.91■□□□□ 0.78
PDLIM2-208ENST00000416159 EDIL3O43854 480 aa19.91■□□□□ 0.78
PDLIM2-208ENST00000416159 KCNQ1P51787 676 aa19.91■□□□□ 0.78
PDLIM2-208ENST00000416159 PAK2Q13177 524 aa19.91■□□□□ 0.78
PDLIM2-208ENST00000416159 RTN4RL1Q86UN2 441 aaPredicted RBP19.91■□□□□ 0.78
PDLIM2-208ENST00000416159 KIAA0319LQ8IZA0 1049 aa19.91■□□□□ 0.78
PDLIM2-208ENST00000416159 CEP131Q9UPN4 1083 aa19.91■□□□□ 0.78
PDLIM2-208ENST00000416159 SAMM50Q9Y512 469 aa19.91■□□□□ 0.78
PDLIM2-208ENST00000416159 WDR64B1ANS9 1081 aa19.9■□□□□ 0.78
PDLIM2-208ENST00000416159 MSH4O15457 936 aa19.9■□□□□ 0.78
PDLIM2-208ENST00000416159 RB1P06400 928 aa19.9■□□□□ 0.78
PDLIM2-208ENST00000416159 STK3Q13188 491 aa19.9■□□□□ 0.78
PDLIM2-208ENST00000416159 ODR4Q5SWX8 454 aa19.9■□□□□ 0.78
PDLIM2-208ENST00000416159 GALNT17Q6IS24 598 aa19.9■□□□□ 0.78
PDLIM2-208ENST00000416159 BLIDQ8IZY5 108 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms