RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 CELF4Q9BZC1 486 aaKnown RBP17.64■□□□□ 0.41
DDX56-202ENST00000415758 FAM49AQ9H0Q0 323 aaPredicted RBP17.64■□□□□ 0.41
DDX56-202ENST00000415758 JPH1Q9HDC5 661 aaPredicted RBP17.64■□□□□ 0.41
DDX56-202ENST00000415758 SLC9A2Q9UBY0 812 aa17.64■□□□□ 0.41
DDX56-202ENST00000415758 PCDHA6Q9UN73 950 aa17.64■□□□□ 0.41
DDX56-202ENST00000415758 PCDHA8Q9Y5H6 950 aa17.64■□□□□ 0.41
DDX56-202ENST00000415758 SPDYE3A6NKU9 549 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 M0QZ92 97 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 CALM1P0DP23 149 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 CALM2P0DP24 149 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 CALM3P0DP25 149 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 SCG2P13521 617 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 LIFRP42702 1097 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 PKN1Q16512 942 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 CASC1Q6TDU7 716 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 TEX2Q8IWB9 1127 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 TMEM87BQ96K49 555 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 AZI2Q9H6S1 392 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 KCNH7Q9NS40 1196 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 NFASCO94856 1347 aa17.63■□□□□ 0.41
DDX56-202ENST00000415758 SMIM35A0A1B0GVV1 85 aa17.62■□□□□ 0.41
DDX56-202ENST00000415758 PRC1O43663 620 aa17.62■□□□□ 0.41
DDX56-202ENST00000415758 ATG7O95352 703 aa17.62■□□□□ 0.41
DDX56-202ENST00000415758 MCM5P33992 734 aa17.62■□□□□ 0.41
DDX56-202ENST00000415758 PAK2Q13177 524 aa17.62■□□□□ 0.41
DDX56-202ENST00000415758 PLCB4Q15147 1175 aa17.62■□□□□ 0.41
DDX56-202ENST00000415758 UBE2SQ16763 222 aa17.62■□□□□ 0.41
DDX56-202ENST00000415758 TRIM67Q6ZTA4 783 aa17.62■□□□□ 0.41
DDX56-202ENST00000415758 CMTR1Q8N1G2 835 aaKnown RBP17.62■□□□□ 0.41
DDX56-202ENST00000415758 MXRA8Q9BRK3 442 aa17.62■□□□□ 0.41
DDX56-202ENST00000415758 TMX1Q9H3N1 280 aa17.62■□□□□ 0.41
DDX56-202ENST00000415758 PKD2L1Q9P0L9 805 aa17.62■□□□□ 0.41
DDX56-202ENST00000415758 RBM8AQ9Y5S9 174 aaKnown RBP17.62■□□□□ 0.41
DDX56-202ENST00000415758 PLXNA4Q9HCM2 1894 aa17.61■□□□□ 0.41
DDX56-202ENST00000415758 SH2B2O14492 632 aaPredicted RBP17.61■□□□□ 0.41
DDX56-202ENST00000415758 GLP2RO95838 553 aa17.61■□□□□ 0.41
DDX56-202ENST00000415758 NRIP1P48552 1158 aa17.61■□□□□ 0.41
DDX56-202ENST00000415758 SLC26A2P50443 739 aa17.61■□□□□ 0.41
DDX56-202ENST00000415758 STAT5BP51692 787 aa17.61■□□□□ 0.41
DDX56-202ENST00000415758 ACTR2P61160 394 aa17.61■□□□□ 0.41
DDX56-202ENST00000415758 UBE3AQ05086 875 aa17.61■□□□□ 0.41
DDX56-202ENST00000415758 TMEM62Q0P6H9 643 aa17.61■□□□□ 0.41
DDX56-202ENST00000415758 PAN2Q504Q3 1202 aaKnown RBP17.61■□□□□ 0.41
DDX56-202ENST00000415758 TRPC6Q9Y210 931 aa17.61■□□□□ 0.41
DDX56-202ENST00000415758 IGKV6D-21A0A0A0MT36 114 aa17.6■□□□□ 0.41
DDX56-202ENST00000415758 CCDC69A6NI79 296 aa17.6■□□□□ 0.41
DDX56-202ENST00000415758 CSPG5O95196 566 aa17.6■□□□□ 0.41
DDX56-202ENST00000415758 SARSP49591 514 aaKnown RBP17.6■□□□□ 0.41
DDX56-202ENST00000415758 KRT76Q01546 638 aa17.6■□□□□ 0.41
DDX56-202ENST00000415758 MTHFD1LQ6UB35 978 aa17.6■□□□□ 0.41
DDX56-202ENST00000415758 NFXL1Q6ZNB6 911 aa17.6■□□□□ 0.41
DDX56-202ENST00000415758 CYP2W1Q8TAV3 490 aa17.6■□□□□ 0.41
DDX56-202ENST00000415758 ATP8B4Q8TF62 1192 aa17.6■□□□□ 0.41
DDX56-202ENST00000415758 TRAPPC12Q8WVT3 735 aa17.6■□□□□ 0.41
DDX56-202ENST00000415758 PRRX2Q99811 253 aa17.6■□□□□ 0.41
DDX56-202ENST00000415758 SDF4Q9BRK5 362 aa17.6■□□□□ 0.41
DDX56-202ENST00000415758 RNF216Q9NWF9 866 aaPredicted RBP17.6■□□□□ 0.41
DDX56-202ENST00000415758 LRFN2Q9ULH4 789 aa17.6■□□□□ 0.41
DDX56-202ENST00000415758 FNDC1Q4ZHG4 1894 aaPredicted RBP17.6■□□□□ 0.41
DDX56-202ENST00000415758 FSD2A1L4K1 749 aa17.59■□□□□ 0.41
DDX56-202ENST00000415758 TMEM221A6NGB7 291 aa17.59■□□□□ 0.41
DDX56-202ENST00000415758 M0R296 226 aa17.59■□□□□ 0.41
DDX56-202ENST00000415758 ATF7P17544 494 aaPredicted RBP17.59■□□□□ 0.41
DDX56-202ENST00000415758 RXRAP19793 462 aa17.59■□□□□ 0.41
DDX56-202ENST00000415758 ZXDAP98168 799 aa17.59■□□□□ 0.41
DDX56-202ENST00000415758 TMTC3Q6ZXV5 915 aa17.59■□□□□ 0.41
DDX56-202ENST00000415758 RBM23Q86U06 439 aaKnown RBP17.59■□□□□ 0.41
DDX56-202ENST00000415758 FANCBQ8NB91 859 aa17.59■□□□□ 0.41
DDX56-202ENST00000415758 PBXIP1Q96AQ6 731 aa17.59■□□□□ 0.41
DDX56-202ENST00000415758 PHF7Q9BWX1 381 aaPredicted RBP17.59■□□□□ 0.41
DDX56-202ENST00000415758 TLE6Q9H808 572 aa17.59■□□□□ 0.41
DDX56-202ENST00000415758 ERVK-5Q9HDB9 667 aa17.59■□□□□ 0.41
DDX56-202ENST00000415758 RGS18Q9NS28 235 aa17.59■□□□□ 0.41
DDX56-202ENST00000415758 BARX2Q9UMQ3 279 aaPredicted RBP17.59■□□□□ 0.41
DDX56-202ENST00000415758 USP15Q9Y4E8 981 aaPredicted RBP17.59■□□□□ 0.41
DDX56-202ENST00000415758 PCDHB7Q9Y5E2 793 aa17.59■□□□□ 0.41
DDX56-202ENST00000415758 PCDHB12Q9Y5F1 795 aa17.59■□□□□ 0.41
DDX56-202ENST00000415758 hCG_1642624A0A1W2PR95 340 aa17.58■□□□□ 0.4
DDX56-202ENST00000415758 FOSP01100 380 aaPredicted RBP17.58■□□□□ 0.4
DDX56-202ENST00000415758 ARP10275 920 aa17.58■□□□□ 0.4
DDX56-202ENST00000415758 KLRC1P26715 233 aa17.58■□□□□ 0.4
DDX56-202ENST00000415758 GATMP50440 423 aa17.58■□□□□ 0.4
DDX56-202ENST00000415758 NFX1Q12986 1120 aaKnown RBP17.58■□□□□ 0.4
DDX56-202ENST00000415758 ITGB3BPQ13352 177 aaPredicted RBP17.58■□□□□ 0.4
DDX56-202ENST00000415758 COL9A3Q14050 684 aaPredicted RBP17.58■□□□□ 0.4
DDX56-202ENST00000415758 CEP55Q53EZ4 464 aa17.58■□□□□ 0.4
DDX56-202ENST00000415758 PDE12Q6L8Q7 609 aaKnown RBP17.58■□□□□ 0.4
DDX56-202ENST00000415758 SGMS1Q86VZ5 419 aa17.58■□□□□ 0.4
DDX56-202ENST00000415758 PRSS33Q8NF86 280 aa17.58■□□□□ 0.4
DDX56-202ENST00000415758 SUSD6Q92537 303 aa17.58■□□□□ 0.4
DDX56-202ENST00000415758 CDCA3Q99618 268 aaPredicted RBP17.58■□□□□ 0.4
DDX56-202ENST00000415758 AAASQ9NRG9 546 aa17.58■□□□□ 0.4
DDX56-202ENST00000415758 C1orf112Q9NSG2 853 aa17.58■□□□□ 0.4
DDX56-202ENST00000415758 SLC12A7Q9Y666 1083 aa17.58■□□□□ 0.4
DDX56-202ENST00000415758 USP34Q70CQ2 3546 aa17.57■□□□□ 0.4
DDX56-202ENST00000415758 ZDBF2Q9HCK1 2354 aa17.57■□□□□ 0.4
DDX56-202ENST00000415758 MEIS1O00470 390 aa17.57■□□□□ 0.4
DDX56-202ENST00000415758 HBP1O60381 514 aa17.57■□□□□ 0.4
DDX56-202ENST00000415758 MGEA5O60502 916 aa17.57■□□□□ 0.4
DDX56-202ENST00000415758 PTPN5P54829 565 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms