RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 ATG7O95352 703 aa23.19■■□□□ 1.3
PTPRU-203ENST00000415600 GHRP10912 638 aa23.19■■□□□ 1.3
PTPRU-203ENST00000415600 PLCB4Q15147 1175 aa23.19■■□□□ 1.3
PTPRU-203ENST00000415600 MARCH8Q5T0T0 291 aa23.19■■□□□ 1.3
PTPRU-203ENST00000415600 NME8Q8N427 588 aa23.19■■□□□ 1.3
PTPRU-203ENST00000415600 PCYT2Q99447 389 aa23.19■■□□□ 1.3
PTPRU-203ENST00000415600 FAM49AQ9H0Q0 323 aaPredicted RBP23.19■■□□□ 1.3
PTPRU-203ENST00000415600 CHMP5Q9NZZ3 219 aa23.19■■□□□ 1.3
PTPRU-203ENST00000415600 PCDHA2Q9Y5H9 948 aa23.19■■□□□ 1.3
PTPRU-203ENST00000415600 MICAL3Q7RTP6 2002 aa23.19■■□□□ 1.3
PTPRU-203ENST00000415600 FAM86B1E9PN63 330 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 DDX39AO00148 427 aaKnown RBP23.18■■□□□ 1.3
PTPRU-203ENST00000415600 HBP1O60381 514 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 UPP2O95045 317 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 HSP90AA1P07900 732 aaKnown RBP23.18■■□□□ 1.3
PTPRU-203ENST00000415600 FAM86B2P0C5J1 330 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 CCT2P78371 535 aaKnown RBP23.18■■□□□ 1.3
PTPRU-203ENST00000415600 SSRP1Q08945 709 aaKnown RBP23.18■■□□□ 1.3
PTPRU-203ENST00000415600 PKN1Q16512 942 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 PTPROQ16827 1216 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 TSHZ1Q6ZSZ6 1077 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 SMAP1Q8IYB5 467 aaPredicted RBP23.18■■□□□ 1.3
PTPRU-203ENST00000415600 FBXO22Q8NEZ5 403 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 FTHL17Q9BXU8 183 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 ZNF302Q9NR11 478 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 CDY2AQ9Y6F7 541 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 VCANP13611 3396 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 PTPRSQ13332 1948 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 KRT76Q01546 638 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 ZNF746Q6NUN9 644 aaPredicted RBP23.18■■□□□ 1.3
PTPRU-203ENST00000415600 PDXDC2PQ6P474 469 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 FAM177A1Q8N128 213 aaPredicted RBP23.18■■□□□ 1.3
PTPRU-203ENST00000415600 SP7Q8TDD2 431 aaPredicted RBP23.18■■□□□ 1.3
PTPRU-203ENST00000415600 ATP8B4Q8TF62 1192 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 GDPD5Q8WTR4 605 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 CRYGNQ8WXF5 182 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 ZNF274Q96GC6 653 aaPredicted RBP23.18■■□□□ 1.3
PTPRU-203ENST00000415600 SUGCTQ9HAC7 445 aa23.18■■□□□ 1.3
PTPRU-203ENST00000415600 CIZ1Q9ULV3 898 aaPredicted RBP23.18■■□□□ 1.3
PTPRU-203ENST00000415600 COL1A2P08123 1366 aa23.17■■□□□ 1.3
PTPRU-203ENST00000415600 NLRP5P59047 1200 aa23.17■■□□□ 1.3
PTPRU-203ENST00000415600 MGAT3Q09327 533 aa23.17■■□□□ 1.3
PTPRU-203ENST00000415600 LPIN1Q14693 890 aa23.17■■□□□ 1.3
PTPRU-203ENST00000415600 NTRK3Q16288 839 aa23.17■■□□□ 1.3
PTPRU-203ENST00000415600 FBXO47Q5MNV8 452 aa23.17■■□□□ 1.3
PTPRU-203ENST00000415600 ABHD15Q6UXT9 468 aa23.17■■□□□ 1.3
PTPRU-203ENST00000415600 CKAP2LQ8IYA6 745 aa23.17■■□□□ 1.3
PTPRU-203ENST00000415600 RWDD3Q9Y3V2 267 aa23.17■■□□□ 1.3
PTPRU-203ENST00000415600 TRPV2Q9Y5S1 764 aa23.17■■□□□ 1.3
PTPRU-203ENST00000415600 TRANK1O15050 2925 aa23.16■■□□□ 1.3
PTPRU-203ENST00000415600 IGKV6D-21A0A0A0MT36 114 aa23.16■■□□□ 1.3
PTPRU-203ENST00000415600 SMIM35A0A1B0GVV1 85 aa23.16■■□□□ 1.3
PTPRU-203ENST00000415600 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.16■■□□□ 1.3
PTPRU-203ENST00000415600 PRR16Q569H4 304 aa23.16■■□□□ 1.3
PTPRU-203ENST00000415600 ZNF484Q5JVG2 852 aa23.16■■□□□ 1.3
PTPRU-203ENST00000415600 ODR4Q5SWX8 454 aa23.16■■□□□ 1.3
PTPRU-203ENST00000415600 HLA-CQ95604 372 aa23.16■■□□□ 1.3
PTPRU-203ENST00000415600 UPF3BQ9BZI7 483 aaKnown RBP23.16■■□□□ 1.3
PTPRU-203ENST00000415600 IGLV3-22A0A075B6J6 115 aa23.15■■□□□ 1.3
PTPRU-203ENST00000415600 LPXNO60711 386 aa23.15■■□□□ 1.3
PTPRU-203ENST00000415600 CDKL5O76039 1030 aa23.15■■□□□ 1.3
PTPRU-203ENST00000415600 PSAPP07602 524 aa23.15■■□□□ 1.3
PTPRU-203ENST00000415600 USP11P51784 963 aa23.15■■□□□ 1.3
PTPRU-203ENST00000415600 ADAMTS19Q8TE59 1207 aa23.15■■□□□ 1.3
PTPRU-203ENST00000415600 NCOA5Q9HCD5 579 aaKnown RBP23.15■■□□□ 1.3
PTPRU-203ENST00000415600 RNF216Q9NWF9 866 aaPredicted RBP23.15■■□□□ 1.3
PTPRU-203ENST00000415600 VPS54Q9P1Q0 977 aa23.15■■□□□ 1.3
PTPRU-203ENST00000415600 CEP131Q9UPN4 1083 aa23.15■■□□□ 1.3
PTPRU-203ENST00000415600 TNFRSF10AO00220 468 aa23.14■■□□□ 1.3
PTPRU-203ENST00000415600 DEXIO95424 95 aa23.14■■□□□ 1.3
PTPRU-203ENST00000415600 CCNE2O96020 404 aa23.14■■□□□ 1.3
PTPRU-203ENST00000415600 CIITAP33076 1130 aa23.14■■□□□ 1.3
PTPRU-203ENST00000415600 SWSAP1Q6NVH7 229 aa23.14■■□□□ 1.3
PTPRU-203ENST00000415600 MTHFD1LQ6UB35 978 aa23.14■■□□□ 1.3
PTPRU-203ENST00000415600 FIBCD1Q8N539 461 aa23.14■■□□□ 1.3
PTPRU-203ENST00000415600 PDRG1Q9NUG6 133 aa23.14■■□□□ 1.3
PTPRU-203ENST00000415600 SAMM50Q9Y512 469 aa23.14■■□□□ 1.3
PTPRU-203ENST00000415600 PCDHA10Q9Y5I2 948 aa23.14■■□□□ 1.3
PTPRU-203ENST00000415600 PAK2Q13177 524 aa23.14■■□□□ 1.29
PTPRU-203ENST00000415600 TOB2Q14106 344 aaPredicted RBP23.14■■□□□ 1.29
PTPRU-203ENST00000415600 GALNT17Q6IS24 598 aa23.14■■□□□ 1.29
PTPRU-203ENST00000415600 FAM167AQ96KS9 214 aa23.14■■□□□ 1.29
PTPRU-203ENST00000415600 UHRF1Q96T88 793 aaPredicted RBP23.14■■□□□ 1.29
PTPRU-203ENST00000415600 C17orf80Q9BSJ5 609 aa23.14■■□□□ 1.29
PTPRU-203ENST00000415600 NCOR1O75376 2440 aa23.13■■□□□ 1.29
PTPRU-203ENST00000415600 WDR64B1ANS9 1081 aa23.13■■□□□ 1.29
PTPRU-203ENST00000415600 DHX15O43143 795 aaKnown RBP23.13■■□□□ 1.29
PTPRU-203ENST00000415600 NFKBIBQ15653 356 aa23.13■■□□□ 1.29
PTPRU-203ENST00000415600 EPC2Q52LR7 807 aa23.13■■□□□ 1.29
PTPRU-203ENST00000415600 KRT40Q6A162 431 aa23.13■■□□□ 1.29
PTPRU-203ENST00000415600 SPRED2Q7Z698 418 aa23.13■■□□□ 1.29
PTPRU-203ENST00000415600 CCDC60Q8IWA6 550 aaPredicted RBP23.13■■□□□ 1.29
PTPRU-203ENST00000415600 BBXQ8WY36 941 aaPredicted RBP23.13■■□□□ 1.29
PTPRU-203ENST00000415600 CELF4Q9BZC1 486 aaKnown RBP23.13■■□□□ 1.29
PTPRU-203ENST00000415600 ENPP3O14638 875 aa23.12■■□□□ 1.29
PTPRU-203ENST00000415600 XBP1P17861 261 aa23.12■■□□□ 1.29
PTPRU-203ENST00000415600 KLRC1P26715 233 aa23.12■■□□□ 1.29
PTPRU-203ENST00000415600 NBR1Q14596 966 aa23.12■■□□□ 1.29
PTPRU-203ENST00000415600 TIGD5Q53EQ6 642 aa23.12■■□□□ 1.29
PTPRU-203ENST00000415600 TMEM192Q8IY95 271 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms